Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 RNU5E-4P-201ENST00000364931 120 ntBASIC2.65□□□□□ -1.99
BEST3Q8N1M1 RNU6-843P-201ENST00000384454 104 ntBASIC2.65□□□□□ -1.99
BEST3Q8N1M1 MIR147B-201ENST00000390185 80 ntBASIC2.65□□□□□ -1.99
BEST3Q8N1M1 AL360182.1-201ENST00000397433 468 ntBASIC2.65□□□□□ -1.99
BEST3Q8N1M1 AC022028.1-201ENST00000412054 408 ntBASIC2.65□□□□□ -1.99
BEST3Q8N1M1 AL139396.1-201ENST00000421137 167 ntBASIC2.65□□□□□ -1.99
BEST3Q8N1M1 RPL7P37-201ENST00000425095 738 ntBASIC2.65□□□□□ -1.99
BEST3Q8N1M1 AL591043.1-201ENST00000432461 424 ntBASIC2.65□□□□□ -1.99
BEST3Q8N1M1 AC087499.2-201ENST00000432861 149 ntBASIC2.65□□□□□ -1.99
BEST3Q8N1M1 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.65□□□□□ -1.99
BEST3Q8N1M1 HMGB1P18-201ENST00000438801 619 ntBASIC2.65□□□□□ -1.99
BEST3Q8N1M1 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.65□□□□□ -1.99
BEST3Q8N1M1 AC124916.1-201ENST00000444020 547 ntBASIC2.65□□□□□ -1.99
BEST3Q8N1M1 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.65□□□□□ -1.99
BEST3Q8N1M1 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.65□□□□□ -1.99
BEST3Q8N1M1 RPL23AP49-201ENST00000492925 468 ntBASIC2.65□□□□□ -1.99
BEST3Q8N1M1 GZMAP1-201ENST00000503054 631 ntBASIC2.65□□□□□ -1.99
BEST3Q8N1M1 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.65□□□□□ -1.99
BEST3Q8N1M1 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.65□□□□□ -1.99
BEST3Q8N1M1 RNU6-507P-201ENST00000516045 100 ntBASIC2.65□□□□□ -1.99
BEST3Q8N1M1 RN7SKP282-201ENST00000516824 299 ntBASIC2.65□□□□□ -1.99
BEST3Q8N1M1 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.65□□□□□ -1.99
BEST3Q8N1M1 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.65□□□□□ -1.99
BEST3Q8N1M1 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.65□□□□□ -1.99
BEST3Q8N1M1 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.65□□□□□ -1.99
BEST3Q8N1M1 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.65□□□□□ -1.99
BEST3Q8N1M1 AC138761.3-201ENST00000579993 334 ntBASIC2.65□□□□□ -1.99
BEST3Q8N1M1 AC091135.1-201ENST00000585943 307 ntBASIC2.65□□□□□ -1.99
BEST3Q8N1M1 AC064836.2-201ENST00000609491 462 ntBASIC2.65□□□□□ -1.99
BEST3Q8N1M1 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.65□□□□□ -1.99
BEST3Q8N1M1 AC002064.3-201ENST00000623448 346 ntBASIC2.65□□□□□ -1.99
BEST3Q8N1M1 AL133216.2-202ENST00000634512 349 ntBASIC2.65□□□□□ -1.99
BEST3Q8N1M1 AP003122.5-201ENST00000527668 3766 ntBASIC2.64□□□□□ -1.99
BEST3Q8N1M1 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
BEST3Q8N1M1 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.64□□□□□ -1.99
BEST3Q8N1M1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
BEST3Q8N1M1 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
BEST3Q8N1M1 Y_RNA.70-201ENST00000362886 110 ntBASIC2.64□□□□□ -1.99
BEST3Q8N1M1 SNORD88.1-201ENST00000408684 91 ntBASIC2.64□□□□□ -1.99
BEST3Q8N1M1 AC074117.2-201ENST00000417130 397 ntBASIC2.64□□□□□ -1.99
BEST3Q8N1M1 AC093019.1-201ENST00000443135 252 ntBASIC2.64□□□□□ -1.99
BEST3Q8N1M1 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.64□□□□□ -1.99
BEST3Q8N1M1 MRPL50P4-201ENST00000446432 475 ntBASIC2.64□□□□□ -1.99
BEST3Q8N1M1 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.64□□□□□ -1.99
BEST3Q8N1M1 AMD1P1-201ENST00000457220 922 ntBASIC2.64□□□□□ -1.99
BEST3Q8N1M1 AC133134.1-201ENST00000466800 359 ntBASIC2.64□□□□□ -1.99
BEST3Q8N1M1 AC103851.1-201ENST00000506833 274 ntBASIC2.64□□□□□ -1.99
BEST3Q8N1M1 AK3P2-201ENST00000507976 429 ntBASIC2.64□□□□□ -1.99
BEST3Q8N1M1 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.64□□□□□ -1.99
BEST3Q8N1M1 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.64□□□□□ -1.99
BEST3Q8N1M1 Y_RNA.682-201ENST00000516457 100 ntBASIC2.64□□□□□ -1.99
BEST3Q8N1M1 RNU5B-3P-201ENST00000516601 115 ntBASIC2.64□□□□□ -1.99
BEST3Q8N1M1 SNORA31.26-201ENST00000517250 137 ntBASIC2.64□□□□□ -1.99
BEST3Q8N1M1 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.64□□□□□ -1.99
BEST3Q8N1M1 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.64□□□□□ -1.99
BEST3Q8N1M1 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.64□□□□□ -1.99
BEST3Q8N1M1 AC104576.1-201ENST00000524225 88 ntBASIC2.64□□□□□ -1.99
BEST3Q8N1M1 AC103996.1-201ENST00000555468 102 ntBASIC2.64□□□□□ -1.99
BEST3Q8N1M1 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.64□□□□□ -1.99
BEST3Q8N1M1 AC008739.2-201ENST00000597006 317 ntBASIC2.64□□□□□ -1.99
BEST3Q8N1M1 VN1R107P-201ENST00000601784 209 ntBASIC2.64□□□□□ -1.99
BEST3Q8N1M1 AL121917.1-203ENST00000605534 577 ntBASIC2.64□□□□□ -1.99
BEST3Q8N1M1 AC009994.1-201ENST00000606889 253 ntBASIC2.64□□□□□ -1.99
BEST3Q8N1M1 RNU6-91P-201ENST00000607774 107 ntBASIC2.64□□□□□ -1.99
BEST3Q8N1M1 AC107871.2-201ENST00000612894 502 ntBASIC2.64□□□□□ -1.99
BEST3Q8N1M1 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.64□□□□□ -1.99
BEST3Q8N1M1 TPTEP1-208ENST00000636884 213 ntBASIC2.64□□□□□ -1.99
BEST3Q8N1M1 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.64□□□□□ -1.99
BEST3Q8N1M1 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
BEST3Q8N1M1 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.63□□□□□ -1.99
BEST3Q8N1M1 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
BEST3Q8N1M1 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.63□□□□□ -1.99
BEST3Q8N1M1 RNU6-428P-201ENST00000362942 107 ntBASIC2.63□□□□□ -1.99
BEST3Q8N1M1 RNU6-105P-201ENST00000363909 104 ntBASIC2.63□□□□□ -1.99
BEST3Q8N1M1 RNU6-487P-201ENST00000365430 104 ntBASIC2.63□□□□□ -1.99
BEST3Q8N1M1 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
BEST3Q8N1M1 RPS29P13-201ENST00000402041 169 ntBASIC2.63□□□□□ -1.99
BEST3Q8N1M1 AL356432.1-201ENST00000405809 419 ntBASIC2.63□□□□□ -1.99
BEST3Q8N1M1 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.63□□□□□ -1.99
BEST3Q8N1M1 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.63□□□□□ -1.99
BEST3Q8N1M1 AC130509.1-201ENST00000464158 433 ntBASIC2.63□□□□□ -1.99
BEST3Q8N1M1 RPL31P41-201ENST00000477967 372 ntBASIC2.63□□□□□ -1.99
BEST3Q8N1M1 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.63□□□□□ -1.99
BEST3Q8N1M1 RPL39P5-202ENST00000512505 151 ntBASIC2.63□□□□□ -1.99
BEST3Q8N1M1 RPL23AP94-201ENST00000512518 302 ntBASIC2.63□□□□□ -1.99
BEST3Q8N1M1 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
BEST3Q8N1M1 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.63□□□□□ -1.99
BEST3Q8N1M1 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.63□□□□□ -1.99
BEST3Q8N1M1 MIR4319-201ENST00000577285 85 ntBASIC2.63□□□□□ -1.99
BEST3Q8N1M1 MIR4790-201ENST00000577799 79 ntBASIC2.63□□□□□ -1.99
BEST3Q8N1M1 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.63□□□□□ -1.99
BEST3Q8N1M1 AC243960.4-201ENST00000600532 288 ntBASIC2.63□□□□□ -1.99
BEST3Q8N1M1 AC104237.2-201ENST00000612456 443 ntBASIC2.63□□□□□ -1.99
BEST3Q8N1M1 uc_338.14-201ENST00000613162 166 ntBASIC2.63□□□□□ -1.99
BEST3Q8N1M1 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.63□□□□□ -1.99
BEST3Q8N1M1 AC244517.12-201ENST00000623581 663 ntBASIC2.63□□□□□ -1.99
BEST3Q8N1M1 AC138627.2-201ENST00000624202 601 ntBASIC2.63□□□□□ -1.99
BEST3Q8N1M1 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
BEST3Q8N1M1 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
BEST3Q8N1M1 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms