Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 HMGB1P18-201ENST00000438801 619 ntBASIC3.04□□□□□ -1.92
VPS52Q8N1B4 UBBP3-201ENST00000445497 241 ntBASIC3.04□□□□□ -1.92
VPS52Q8N1B4 FTH1P25-201ENST00000447665 469 ntBASIC3.04□□□□□ -1.92
VPS52Q8N1B4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.04□□□□□ -1.92
VPS52Q8N1B4 BTF3P15-201ENST00000455606 336 ntBASIC3.04□□□□□ -1.92
VPS52Q8N1B4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.04□□□□□ -1.92
VPS52Q8N1B4 AC113155.1-201ENST00000511141 769 ntBASIC3.04□□□□□ -1.92
VPS52Q8N1B4 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.04□□□□□ -1.92
VPS52Q8N1B4 Y_RNA.687-201ENST00000516558 91 ntBASIC3.04□□□□□ -1.92
VPS52Q8N1B4 AC022634.1-201ENST00000520765 532 ntBASIC3.04□□□□□ -1.92
VPS52Q8N1B4 AC025423.5-201ENST00000550230 219 ntBASIC3.04□□□□□ -1.92
VPS52Q8N1B4 AL670379.10-201ENST00000604330 253 ntBASIC3.04□□□□□ -1.92
VPS52Q8N1B4 AL670379.9-201ENST00000605428 253 ntBASIC3.04□□□□□ -1.92
VPS52Q8N1B4 AC004852.3-201ENST00000614131 326 ntBASIC3.04□□□□□ -1.92
VPS52Q8N1B4 AC009233.1-201ENST00000616477 371 ntBASIC3.04□□□□□ -1.92
VPS52Q8N1B4 AC010378.1-201ENST00000619270 362 ntBASIC3.04□□□□□ -1.92
VPS52Q8N1B4 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.03□□□□□ -1.92
VPS52Q8N1B4 RNU6-942P-201ENST00000363002 107 ntBASIC3.03□□□□□ -1.92
VPS52Q8N1B4 RPL19P1-201ENST00000411635 428 ntBASIC3.03□□□□□ -1.92
VPS52Q8N1B4 TOMM20P4-201ENST00000427861 435 ntBASIC3.03□□□□□ -1.92
VPS52Q8N1B4 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.03□□□□□ -1.92
VPS52Q8N1B4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.03□□□□□ -1.92
VPS52Q8N1B4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.03□□□□□ -1.92
VPS52Q8N1B4 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.03□□□□□ -1.92
VPS52Q8N1B4 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.03□□□□□ -1.92
VPS52Q8N1B4 AC013470.1-201ENST00000453438 462 ntBASIC3.03□□□□□ -1.92
VPS52Q8N1B4 AC008526.1-201ENST00000509149 338 ntBASIC3.03□□□□□ -1.92
VPS52Q8N1B4 RNU6-566P-201ENST00000516790 107 ntBASIC3.03□□□□□ -1.92
VPS52Q8N1B4 AC105029.1-201ENST00000520250 669 ntBASIC3.03□□□□□ -1.92
VPS52Q8N1B4 RAB11AP2-201ENST00000545905 639 ntBASIC3.03□□□□□ -1.92
VPS52Q8N1B4 AC006199.1-201ENST00000548728 219 ntBASIC3.03□□□□□ -1.92
VPS52Q8N1B4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.03□□□□□ -1.92
VPS52Q8N1B4 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.03□□□□□ -1.92
VPS52Q8N1B4 OR1M4P-201ENST00000589199 287 ntBASIC3.03□□□□□ -1.92
VPS52Q8N1B4 AC010620.2-201ENST00000600135 313 ntBASIC3.03□□□□□ -1.92
VPS52Q8N1B4 AL161629.2-201ENST00000615347 275 ntBASIC3.03□□□□□ -1.92
VPS52Q8N1B4 AC104985.2-201ENST00000620598 500 ntBASIC3.03□□□□□ -1.92
VPS52Q8N1B4 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
VPS52Q8N1B4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
VPS52Q8N1B4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.02□□□□□ -1.93
VPS52Q8N1B4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VPS52Q8N1B4 RNU6-37P-201ENST00000362692 107 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 RNU6-11P-201ENST00000364234 107 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 RNU1-100P-201ENST00000365255 165 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 Y_RNA.339-201ENST00000365325 102 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 RNU6-1329P-201ENST00000365664 107 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VPS52Q8N1B4 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VPS52Q8N1B4 RNU6-25P-201ENST00000383873 107 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 RNU6-1-201ENST00000383898 107 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 RNU6-48P-201ENST00000384161 107 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 RNU6-36P-201ENST00000384172 107 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 RNU6-4P-201ENST00000384205 107 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 RNU6-5P-201ENST00000384238 107 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 RNU6-3P-201ENST00000384314 107 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 RNU6-16P-201ENST00000384385 107 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 RNU6-15P-201ENST00000384534 107 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 RNU6-2-201ENST00000384627 107 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 RNU6-29P-201ENST00000384637 107 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 RNU6-9-201ENST00000384776 107 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 RNU6-33P-201ENST00000384793 107 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 MIR548K-201ENST00000408406 116 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 HMGN2P35-201ENST00000412164 270 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 UBE2V1P4-201ENST00000425374 344 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 RPS15AP5-201ENST00000436276 388 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 AC093019.1-201ENST00000443135 252 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 HIGD1AP2-201ENST00000446367 280 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 MTND1P17-201ENST00000448961 204 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 RPL23AP45-201ENST00000476406 468 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 RN7SL499P-201ENST00000481141 276 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 RNU6-1332P-201ENST00000516666 104 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 RNA5SP454-201ENST00000517231 127 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.02□□□□□ -1.93
VPS52Q8N1B4 AP004607.1-201ENST00000524456 203 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 AC005668.1-201ENST00000571142 476 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 MIR3945-201ENST00000581853 98 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 MIR4435-1-201ENST00000582552 80 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 AC023043.3-201ENST00000593113 385 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 AC008121.1-201ENST00000603244 268 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 RNU6-6P-201ENST00000606623 107 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 AL132765.2-201ENST00000610812 351 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 AC107871.2-201ENST00000612894 502 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 uc_338.15-201ENST00000615470 191 ntBASIC3.02□□□□□ -1.93
VPS52Q8N1B4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
VPS52Q8N1B4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.02□□□□□ -1.93
VPS52Q8N1B4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.02□□□□□ -1.93
VPS52Q8N1B4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
VPS52Q8N1B4 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
VPS52Q8N1B4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
VPS52Q8N1B4 RNU6-562P-201ENST00000362731 107 ntBASIC3.01□□□□□ -1.93
VPS52Q8N1B4 RNU6-214P-201ENST00000384130 107 ntBASIC3.01□□□□□ -1.93
VPS52Q8N1B4 MIR181B1-201ENST00000385240 110 ntBASIC3.01□□□□□ -1.93
VPS52Q8N1B4 MT-TD-201ENST00000387419 68 ntBASIC3.01□□□□□ -1.93
VPS52Q8N1B4 AL451074.5-201ENST00000415894 435 ntBASIC3.01□□□□□ -1.93
VPS52Q8N1B4 AL513477.1-202ENST00000417061 214 ntBASIC3.01□□□□□ -1.93
VPS52Q8N1B4 AL117339.3-201ENST00000418733 162 ntBASIC3.01□□□□□ -1.93
VPS52Q8N1B4 ARL5AP4-201ENST00000430731 512 ntBASIC3.01□□□□□ -1.93
VPS52Q8N1B4 SNAP23P1-201ENST00000433229 246 ntBASIC3.01□□□□□ -1.93
VPS52Q8N1B4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.01□□□□□ -1.93
VPS52Q8N1B4 snoU109.2-201ENST00000459316 135 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms