Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 U3.6-201ENST00000363622 211 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 RNU6-280P-201ENST00000364145 104 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 U3.13-201ENST00000364804 214 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 RNU6-629P-201ENST00000384061 103 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 MIR449B-201ENST00000384995 97 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 MIR670-201ENST00000390142 98 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 RPL21P75-201ENST00000396599 483 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 RPL21P28-201ENST00000401418 483 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.33□□□□□ -1.88
VRK3Q8IV63 AL603910.2-201ENST00000407268 136 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 Y_RNA.623-201ENST00000411128 95 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 AP000275.1-201ENST00000411943 390 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.33□□□□□ -1.88
VRK3Q8IV63 AL590556.1-201ENST00000423231 483 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.33□□□□□ -1.88
VRK3Q8IV63 AC079780.1-201ENST00000428259 207 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 AL627311.1-201ENST00000431514 115 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 BX679664.1-201ENST00000434429 253 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 AL139109.1-201ENST00000455491 297 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 RPL23AP62-201ENST00000463396 453 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 RPL21P39-201ENST00000463605 483 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 RPS20P22-201ENST00000473700 357 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 AC132942.1-201ENST00000486753 483 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 AC093591.1-201ENST00000491435 481 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 RPL21P129-201ENST00000491732 478 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 RPL21P16-201ENST00000495531 483 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 SCARNA15.2-201ENST00000516409 127 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 RNU6-612P-201ENST00000516909 102 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 AC109479.2-201ENST00000517842 174 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 AC091144.1-201ENST00000519573 138 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.33□□□□□ -1.88
VRK3Q8IV63 AP002770.2-201ENST00000543613 532 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 AC103996.1-201ENST00000555468 102 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 SNORD84-203ENST00000584275 78 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 AC073410.2-201ENST00000603240 332 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 MIR92B-201ENST00000607575 96 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 AL450472.1-202ENST00000637286 180 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.33□□□□□ -1.88
VRK3Q8IV63 AL021368.2-201ENST00000606125 5352 ntBASIC3.33□□□□□ -1.88
VRK3Q8IV63 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.33□□□□□ -1.88
VRK3Q8IV63 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
VRK3Q8IV63 LINC02555-201ENST00000563933 1951 ntBASIC3.32□□□□□ -1.88
VRK3Q8IV63 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VRK3Q8IV63 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
VRK3Q8IV63 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
VRK3Q8IV63 RNU6-746P-201ENST00000384112 109 ntBASIC3.32□□□□□ -1.88
VRK3Q8IV63 RNY3P4-201ENST00000384428 101 ntBASIC3.32□□□□□ -1.88
VRK3Q8IV63 SNORA12.2-201ENST00000391040 156 ntBASIC3.32□□□□□ -1.88
VRK3Q8IV63 EI24P2-201ENST00000397776 1076 ntBASIC3.32□□□□□ -1.88
VRK3Q8IV63 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.32□□□□□ -1.88
VRK3Q8IV63 RPL23AP22-201ENST00000437556 453 ntBASIC3.32□□□□□ -1.88
VRK3Q8IV63 AC104332.1-201ENST00000440471 797 ntBASIC3.32□□□□□ -1.88
VRK3Q8IV63 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
VRK3Q8IV63 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.32□□□□□ -1.88
VRK3Q8IV63 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.32□□□□□ -1.88
VRK3Q8IV63 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.32□□□□□ -1.88
VRK3Q8IV63 MED28P2-201ENST00000475771 317 ntBASIC3.32□□□□□ -1.88
VRK3Q8IV63 MIR2355-201ENST00000517199 87 ntBASIC3.32□□□□□ -1.88
VRK3Q8IV63 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.32□□□□□ -1.88
VRK3Q8IV63 NDUFB9P3-201ENST00000521269 501 ntBASIC3.32□□□□□ -1.88
VRK3Q8IV63 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.32□□□□□ -1.88
VRK3Q8IV63 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.32□□□□□ -1.88
VRK3Q8IV63 TGIF1P1-201ENST00000558095 802 ntBASIC3.32□□□□□ -1.88
VRK3Q8IV63 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.32□□□□□ -1.88
VRK3Q8IV63 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.32□□□□□ -1.88
VRK3Q8IV63 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.32□□□□□ -1.88
VRK3Q8IV63 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.32□□□□□ -1.88
VRK3Q8IV63 FAM60BP-201ENST00000578364 658 ntBASIC3.32□□□□□ -1.88
VRK3Q8IV63 MIR4300-201ENST00000581016 96 ntBASIC3.32□□□□□ -1.88
VRK3Q8IV63 AC002545.1-201ENST00000592511 181 ntBASIC3.32□□□□□ -1.88
VRK3Q8IV63 BX284668.6-201ENST00000606899 438 ntBASIC3.32□□□□□ -1.88
VRK3Q8IV63 AC012531.5-201ENST00000611375 151 ntBASIC3.32□□□□□ -1.88
VRK3Q8IV63 AL161629.2-201ENST00000615347 275 ntBASIC3.32□□□□□ -1.88
VRK3Q8IV63 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.32□□□□□ -1.88
VRK3Q8IV63 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC3.32□□□□□ -1.88
VRK3Q8IV63 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.32□□□□□ -1.88
VRK3Q8IV63 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.32□□□□□ -1.88
VRK3Q8IV63 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
VRK3Q8IV63 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
VRK3Q8IV63 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.32□□□□□ -1.88
VRK3Q8IV63 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.31□□□□□ -1.88
VRK3Q8IV63 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.31□□□□□ -1.88
VRK3Q8IV63 OR4G2P-202ENST00000641004 1759 ntBASIC3.31□□□□□ -1.88
VRK3Q8IV63 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VRK3Q8IV63 Y_RNA.150-201ENST00000363562 102 ntBASIC3.31□□□□□ -1.88
VRK3Q8IV63 RNA5SP50-201ENST00000363731 107 ntBASIC3.31□□□□□ -1.88
VRK3Q8IV63 Y_RNA.297-201ENST00000364950 91 ntBASIC3.31□□□□□ -1.88
VRK3Q8IV63 Y_RNA.439-201ENST00000384119 94 ntBASIC3.31□□□□□ -1.88
VRK3Q8IV63 Y_RNA.464-201ENST00000384282 110 ntBASIC3.31□□□□□ -1.88
VRK3Q8IV63 SNORA40C-201ENST00000391285 128 ntBASIC3.31□□□□□ -1.88
VRK3Q8IV63 PCNPP3-201ENST00000393579 471 ntBASIC3.31□□□□□ -1.88
VRK3Q8IV63 RN7SKP111-201ENST00000410349 271 ntBASIC3.31□□□□□ -1.88
VRK3Q8IV63 AC244098.2-201ENST00000422068 99 ntBASIC3.31□□□□□ -1.88
VRK3Q8IV63 NDUFB4P7-201ENST00000423198 363 ntBASIC3.31□□□□□ -1.88
VRK3Q8IV63 AL049874.1-201ENST00000489560 388 ntBASIC3.31□□□□□ -1.88
VRK3Q8IV63 AC093663.1-201ENST00000497190 394 ntBASIC3.31□□□□□ -1.88
VRK3Q8IV63 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.31□□□□□ -1.88
VRK3Q8IV63 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.31□□□□□ -1.88
VRK3Q8IV63 DEFB108E-201ENST00000524692 240 ntBASIC3.31□□□□□ -1.88
VRK3Q8IV63 SYF2P1-201ENST00000550658 413 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms