Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.32□□□□□ -1.72
USP48Q86UV5 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.32□□□□□ -1.72
USP48Q86UV5 MYL12BP1-201ENST00000569826 507 ntBASIC4.32□□□□□ -1.72
USP48Q86UV5 MIR5696-201ENST00000578474 85 ntBASIC4.32□□□□□ -1.72
USP48Q86UV5 AC020895.1-201ENST00000595362 272 ntBASIC4.32□□□□□ -1.72
USP48Q86UV5 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.32□□□□□ -1.72
USP48Q86UV5 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.32□□□□□ -1.72
USP48Q86UV5 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
USP48Q86UV5 AL353743.1-202ENST00000431724 1695 ntBASIC4.32□□□□□ -1.72
USP48Q86UV5 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.31□□□□□ -1.72
USP48Q86UV5 AC110491.1-201ENST00000562191 2010 ntBASIC4.31□□□□□ -1.72
USP48Q86UV5 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
USP48Q86UV5 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.31□□□□□ -1.72
USP48Q86UV5 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
USP48Q86UV5 AL353746.1-201ENST00000566293 6881 ntBASIC4.31□□□□□ -1.72
USP48Q86UV5 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
USP48Q86UV5 CEP170P1-201ENST00000502249 4587 ntBASIC4.31□□□□□ -1.72
USP48Q86UV5 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
USP48Q86UV5 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
USP48Q86UV5 RNU6-379P-201ENST00000363813 104 ntBASIC4.31□□□□□ -1.72
USP48Q86UV5 Y_RNA.389-201ENST00000383924 113 ntBASIC4.31□□□□□ -1.72
USP48Q86UV5 SNORD17-201ENST00000390930 237 ntBASIC4.31□□□□□ -1.72
USP48Q86UV5 RNU6-1156P-201ENST00000410365 100 ntBASIC4.31□□□□□ -1.72
USP48Q86UV5 DPH3P2-201ENST00000422618 250 ntBASIC4.31□□□□□ -1.72
USP48Q86UV5 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.31□□□□□ -1.72
USP48Q86UV5 AL591043.1-201ENST00000432461 424 ntBASIC4.31□□□□□ -1.72
USP48Q86UV5 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.31□□□□□ -1.72
USP48Q86UV5 AL353752.1-201ENST00000454946 260 ntBASIC4.31□□□□□ -1.72
USP48Q86UV5 MTND4LP22-201ENST00000508209 276 ntBASIC4.31□□□□□ -1.72
USP48Q86UV5 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.31□□□□□ -1.72
USP48Q86UV5 PHBP14-201ENST00000512887 367 ntBASIC4.31□□□□□ -1.72
USP48Q86UV5 RNU7-4P-201ENST00000516961 62 ntBASIC4.31□□□□□ -1.72
USP48Q86UV5 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.31□□□□□ -1.72
USP48Q86UV5 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.31□□□□□ -1.72
USP48Q86UV5 AC009318.2-201ENST00000610917 651 ntBASIC4.31□□□□□ -1.72
USP48Q86UV5 AL606534.2-204ENST00000635008 178 ntBASIC4.31□□□□□ -1.72
USP48Q86UV5 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
USP48Q86UV5 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
USP48Q86UV5 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.31□□□□□ -1.72
USP48Q86UV5 AP001148.1-201ENST00000624124 2359 ntBASIC4.31□□□□□ -1.72
USP48Q86UV5 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
USP48Q86UV5 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
USP48Q86UV5 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
USP48Q86UV5 RNA5SP374-201ENST00000362939 125 ntBASIC4.3□□□□□ -1.72
USP48Q86UV5 Y_RNA.106-201ENST00000363189 100 ntBASIC4.3□□□□□ -1.72
USP48Q86UV5 AP000275.1-201ENST00000411943 390 ntBASIC4.3□□□□□ -1.72
USP48Q86UV5 BPY2DP-201ENST00000422208 265 ntBASIC4.3□□□□□ -1.72
USP48Q86UV5 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.3□□□□□ -1.72
USP48Q86UV5 HMGN2P10-201ENST00000448085 265 ntBASIC4.3□□□□□ -1.72
USP48Q86UV5 AC112492.4-201ENST00000456549 352 ntBASIC4.3□□□□□ -1.72
USP48Q86UV5 snoU13.28-201ENST00000459235 104 ntBASIC4.3□□□□□ -1.72
USP48Q86UV5 RN7SL504P-201ENST00000494496 287 ntBASIC4.3□□□□□ -1.72
USP48Q86UV5 AC009812.2-201ENST00000517657 457 ntBASIC4.3□□□□□ -1.72
USP48Q86UV5 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.3□□□□□ -1.72
USP48Q86UV5 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.3□□□□□ -1.72
USP48Q86UV5 AL138825.1-201ENST00000618587 192 ntBASIC4.3□□□□□ -1.72
USP48Q86UV5 AC006386.2-201ENST00000624491 75 ntBASIC4.3□□□□□ -1.72
USP48Q86UV5 AC012005.1-201ENST00000624575 75 ntBASIC4.3□□□□□ -1.72
USP48Q86UV5 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.3□□□□□ -1.72
USP48Q86UV5 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
USP48Q86UV5 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
USP48Q86UV5 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.3□□□□□ -1.72
USP48Q86UV5 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
USP48Q86UV5 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
USP48Q86UV5 OTUD4P1-201ENST00000237841 3067 ntBASIC4.29□□□□□ -1.72
USP48Q86UV5 ADAM3A-203ENST00000461344 2157 ntBASIC4.29□□□□□ -1.72
USP48Q86UV5 SNORD50.1-201ENST00000362987 71 ntBASIC4.29□□□□□ -1.72
USP48Q86UV5 RNU6-595P-201ENST00000363944 107 ntBASIC4.29□□□□□ -1.72
USP48Q86UV5 RNU6-1280P-201ENST00000365211 107 ntBASIC4.29□□□□□ -1.72
USP48Q86UV5 Y_RNA.476-201ENST00000384347 108 ntBASIC4.29□□□□□ -1.72
USP48Q86UV5 SNORD116-20-201ENST00000384529 92 ntBASIC4.29□□□□□ -1.72
USP48Q86UV5 MIR625-201ENST00000385047 85 ntBASIC4.29□□□□□ -1.72
USP48Q86UV5 BTF3L4P2-201ENST00000392798 346 ntBASIC4.29□□□□□ -1.72
USP48Q86UV5 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.29□□□□□ -1.72
USP48Q86UV5 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.29□□□□□ -1.72
USP48Q86UV5 RPL21P2-201ENST00000440049 481 ntBASIC4.29□□□□□ -1.72
USP48Q86UV5 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.29□□□□□ -1.72
USP48Q86UV5 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.29□□□□□ -1.72
USP48Q86UV5 AC004584.2-201ENST00000570407 410 ntBASIC4.29□□□□□ -1.72
USP48Q86UV5 LARP7P3-201ENST00000579888 337 ntBASIC4.29□□□□□ -1.72
USP48Q86UV5 MIR4325-201ENST00000583049 90 ntBASIC4.29□□□□□ -1.72
USP48Q86UV5 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP48Q86UV5 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.29□□□□□ -1.72
USP48Q86UV5 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
USP48Q86UV5 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP48Q86UV5 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.29□□□□□ -1.72
USP48Q86UV5 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
USP48Q86UV5 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.28□□□□□ -1.72
USP48Q86UV5 RNU6-700P-201ENST00000391043 107 ntBASIC4.28□□□□□ -1.72
USP48Q86UV5 RNU6-1245P-201ENST00000411130 106 ntBASIC4.28□□□□□ -1.72
USP48Q86UV5 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.28□□□□□ -1.72
USP48Q86UV5 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.28□□□□□ -1.72
USP48Q86UV5 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.28□□□□□ -1.72
USP48Q86UV5 MRPS35P2-201ENST00000508242 191 ntBASIC4.28□□□□□ -1.72
USP48Q86UV5 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.28□□□□□ -1.72
USP48Q86UV5 AL138880.2-201ENST00000616214 239 ntBASIC4.28□□□□□ -1.72
USP48Q86UV5 U4.6-201ENST00000621618 127 ntBASIC4.28□□□□□ -1.72
USP48Q86UV5 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.28□□□□□ -1.72
USP48Q86UV5 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
USP48Q86UV5 AC008669.1-201ENST00000565823 2178 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms