Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.43□□□□□ -2.48
VPS13CQ709C8 AC073261.1-201ENST00000429409 121 ntBASIC-0.43□□□□□ -2.48
VPS13CQ709C8 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC-0.43□□□□□ -2.48
VPS13CQ709C8 snoU13.28-201ENST00000459235 104 ntBASIC-0.43□□□□□ -2.48
VPS13CQ709C8 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.43□□□□□ -2.48
VPS13CQ709C8 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.43□□□□□ -2.48
VPS13CQ709C8 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.44□□□□□ -2.48
VPS13CQ709C8 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC-0.44□□□□□ -2.48
VPS13CQ709C8 RPS24P7-201ENST00000416921 246 ntBASIC-0.44□□□□□ -2.48
VPS13CQ709C8 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC-0.44□□□□□ -2.48
VPS13CQ709C8 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.44□□□□□ -2.48
VPS13CQ709C8 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.44□□□□□ -2.48
VPS13CQ709C8 RNU7-159P-201ENST00000459284 62 ntBASIC-0.44□□□□□ -2.48
VPS13CQ709C8 AC026782.1-201ENST00000512952 449 ntBASIC-0.44□□□□□ -2.48
VPS13CQ709C8 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC-0.44□□□□□ -2.48
VPS13CQ709C8 AC112693.2-201ENST00000556538 232 ntBASIC-0.44□□□□□ -2.48
VPS13CQ709C8 AC233702.2-202ENST00000562547 291 ntBASIC-0.44□□□□□ -2.48
VPS13CQ709C8 AC027104.1-201ENST00000563702 681 ntBASIC-0.44□□□□□ -2.48
VPS13CQ709C8 AC132825.8-201ENST00000640783 297 ntBASIC-0.44□□□□□ -2.48
VPS13CQ709C8 SNORA36.2-201ENST00000384004 127 ntBASIC-0.44□□□□□ -2.48
VPS13CQ709C8 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC-0.44□□□□□ -2.48
VPS13CQ709C8 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.44□□□□□ -2.48
VPS13CQ709C8 RPS15AP9-201ENST00000439856 381 ntBASIC-0.44□□□□□ -2.48
VPS13CQ709C8 AC016925.1-201ENST00000458303 298 ntBASIC-0.44□□□□□ -2.48
VPS13CQ709C8 AC012669.1-201ENST00000603209 283 ntBASIC-0.44□□□□□ -2.48
VPS13CQ709C8 AC009033.1-201ENST00000624279 431 ntBASIC-0.44□□□□□ -2.48
VPS13CQ709C8 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.44□□□□□ -2.48
VPS13CQ709C8 RNA5SP192-201ENST00000364404 120 ntBASIC-0.44□□□□□ -2.48
VPS13CQ709C8 RNU6-1065P-201ENST00000384513 106 ntBASIC-0.44□□□□□ -2.48
VPS13CQ709C8 AC016909.1-201ENST00000415916 166 ntBASIC-0.44□□□□□ -2.48
VPS13CQ709C8 AC007435.1-201ENST00000421086 415 ntBASIC-0.44□□□□□ -2.48
VPS13CQ709C8 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC-0.44□□□□□ -2.48
VPS13CQ709C8 SNORA31.6-201ENST00000516241 130 ntBASIC-0.44□□□□□ -2.48
VPS13CQ709C8 AC040926.1-201ENST00000530195 238 ntBASIC-0.44□□□□□ -2.48
VPS13CQ709C8 BBIP1P1-201ENST00000602999 279 ntBASIC-0.44□□□□□ -2.48
VPS13CQ709C8 AC064807.4-201ENST00000607201 407 ntBASIC-0.44□□□□□ -2.48
VPS13CQ709C8 MIR302D-201ENST00000362275 68 ntBASIC-0.45□□□□□ -2.48
VPS13CQ709C8 RNU6-40P-201ENST00000384254 107 ntBASIC-0.45□□□□□ -2.48
VPS13CQ709C8 SNORD99-201ENST00000408612 74 ntBASIC-0.45□□□□□ -2.48
VPS13CQ709C8 C1DP1-201ENST00000426049 402 ntBASIC-0.45□□□□□ -2.48
VPS13CQ709C8 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC-0.45□□□□□ -2.48
VPS13CQ709C8 RNA5SP503-201ENST00000517047 117 ntBASIC-0.45□□□□□ -2.48
VPS13CQ709C8 AC069294.1-201ENST00000608397 350 ntBASIC-0.45□□□□□ -2.48
VPS13CQ709C8 AC092125.1-201ENST00000562568 1995 ntBASIC-0.45□□□□□ -2.48
VPS13CQ709C8 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.45□□□□□ -2.48
VPS13CQ709C8 RNU6-439P-201ENST00000384188 106 ntBASIC-0.45□□□□□ -2.48
VPS13CQ709C8 AL591034.2-201ENST00000402839 359 ntBASIC-0.45□□□□□ -2.48
VPS13CQ709C8 RPL17P35-201ENST00000432217 549 ntBASIC-0.45□□□□□ -2.48
VPS13CQ709C8 MTCO2P20-201ENST00000437339 673 ntBASIC-0.45□□□□□ -2.48
VPS13CQ709C8 GXYLT1P1-201ENST00000446657 490 ntBASIC-0.45□□□□□ -2.48
VPS13CQ709C8 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC-0.45□□□□□ -2.48
VPS13CQ709C8 HMSD-204ENST00000526932 162 ntTSL 3 BASIC-0.45□□□□□ -2.48
VPS13CQ709C8 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC-0.45□□□□□ -2.48
VPS13CQ709C8 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC-0.45□□□□□ -2.48
VPS13CQ709C8 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC-0.45□□□□□ -2.48
VPS13CQ709C8 RNU4-84P-201ENST00000364200 139 ntBASIC-0.45□□□□□ -2.48
VPS13CQ709C8 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC-0.45□□□□□ -2.48
VPS13CQ709C8 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.45□□□□□ -2.48
VPS13CQ709C8 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.45□□□□□ -2.48
VPS13CQ709C8 AP002453.2-201ENST00000533503 320 ntBASIC-0.45□□□□□ -2.48
VPS13CQ709C8 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
VPS13CQ709C8 AP003072.4-201ENST00000624580 310 ntBASIC-0.45□□□□□ -2.48
VPS13CQ709C8 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC-0.45□□□□□ -2.48
VPS13CQ709C8 SNORA75.3-201ENST00000391231 150 ntBASIC-0.46□□□□□ -2.48
VPS13CQ709C8 AC109327.2-201ENST00000448339 378 ntBASIC-0.46□□□□□ -2.48
VPS13CQ709C8 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC-0.46□□□□□ -2.48
VPS13CQ709C8 AC104136.1-201ENST00000512969 394 ntBASIC-0.46□□□□□ -2.48
VPS13CQ709C8 RNU6-964P-201ENST00000516524 69 ntBASIC-0.46□□□□□ -2.48
VPS13CQ709C8 OR8K2P-201ENST00000524645 927 ntBASIC-0.46□□□□□ -2.48
VPS13CQ709C8 AC125611.1-201ENST00000549563 229 ntBASIC-0.46□□□□□ -2.48
VPS13CQ709C8 RNU6-837P-201ENST00000391056 108 ntBASIC-0.46□□□□□ -2.48
VPS13CQ709C8 TRAPPC13P1-201ENST00000435991 1062 ntBASIC-0.46□□□□□ -2.48
VPS13CQ709C8 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-0.46□□□□□ -2.48
VPS13CQ709C8 AC022447.1-201ENST00000515358 464 ntBASIC-0.46□□□□□ -2.48
VPS13CQ709C8 RNA5SP180-201ENST00000516181 101 ntBASIC-0.46□□□□□ -2.48
VPS13CQ709C8 HAUS1P3-201ENST00000523909 662 ntBASIC-0.46□□□□□ -2.48
VPS13CQ709C8 AC105148.1-201ENST00000604961 409 ntBASIC-0.46□□□□□ -2.48
VPS13CQ709C8 AL138963.2-201ENST00000605137 226 ntBASIC-0.46□□□□□ -2.48
VPS13CQ709C8 AL359314.1-201ENST00000616913 261 ntBASIC-0.46□□□□□ -2.48
VPS13CQ709C8 Y_RNA.124-201ENST00000363339 93 ntBASIC-0.46□□□□□ -2.48
VPS13CQ709C8 RNU6-815P-201ENST00000384080 113 ntBASIC-0.46□□□□□ -2.48
VPS13CQ709C8 MIR145-201ENST00000384967 88 ntBASIC-0.46□□□□□ -2.48
VPS13CQ709C8 SNORA4.4-201ENST00000515921 135 ntBASIC-0.46□□□□□ -2.48
VPS13CQ709C8 AC010376.1-201ENST00000522101 334 ntBASIC-0.46□□□□□ -2.48
VPS13CQ709C8 MIR3115-201ENST00000577915 68 ntBASIC-0.46□□□□□ -2.48
VPS13CQ709C8 MIR3666-201ENST00000607845 111 ntBASIC-0.46□□□□□ -2.48
VPS13CQ709C8 MIR8076-201ENST00000611401 83 ntBASIC-0.46□□□□□ -2.48
VPS13CQ709C8 RNU5D-1-201ENST00000363299 116 ntBASIC-0.47□□□□□ -2.48
VPS13CQ709C8 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.47□□□□□ -2.48
VPS13CQ709C8 RNU6-370P-201ENST00000411008 104 ntBASIC-0.47□□□□□ -2.48
VPS13CQ709C8 snoU13.4-201ENST00000458916 104 ntBASIC-0.47□□□□□ -2.48
VPS13CQ709C8 AC069113.3-201ENST00000521019 150 ntBASIC-0.47□□□□□ -2.48
VPS13CQ709C8 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.47□□□□□ -2.48
VPS13CQ709C8 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.47□□□□□ -2.48
VPS13CQ709C8 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC-0.47□□□□□ -2.48
VPS13CQ709C8 AC093838.1-201ENST00000613014 469 ntBASIC-0.47□□□□□ -2.48
VPS13CQ709C8 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC-0.47□□□□□ -2.48
VPS13CQ709C8 UBE2V1P8-201ENST00000437166 265 ntBASIC-0.47□□□□□ -2.48
VPS13CQ709C8 MIR4765-201ENST00000585007 77 ntBASIC-0.47□□□□□ -2.48
VPS13CQ709C8 AP001330.4-201ENST00000604350 154 ntBASIC-0.47□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms