Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 SUB1P3-201ENST00000564581 315 ntBASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 VN1R107P-201ENST00000601784 209 ntBASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 AL162730.1-201ENST00000605734 292 ntBASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 U1.23-201ENST00000610293 146 ntBASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 RNU1-68P-201ENST00000615382 146 ntBASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 U1.39-201ENST00000621562 146 ntBASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 MIR3199-2-201ENST00000636243 86 ntBASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 AC241585.2-209ENST00000638217 143 ntBASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.05□□□□□ -1.92
PTCHD4Q6ZW05 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
PTCHD4Q6ZW05 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
PTCHD4Q6ZW05 SNORD56.1-201ENST00000362913 68 ntBASIC3.04□□□□□ -1.92
PTCHD4Q6ZW05 SNORD50.1-201ENST00000362987 71 ntBASIC3.04□□□□□ -1.92
PTCHD4Q6ZW05 RNU6-99P-201ENST00000364721 107 ntBASIC3.04□□□□□ -1.92
PTCHD4Q6ZW05 Y_RNA.364-201ENST00000365532 101 ntBASIC3.04□□□□□ -1.92
PTCHD4Q6ZW05 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PTCHD4Q6ZW05 MRPL42P3-201ENST00000401492 326 ntBASIC3.04□□□□□ -1.92
PTCHD4Q6ZW05 AC023141.4-201ENST00000412031 328 ntBASIC3.04□□□□□ -1.92
PTCHD4Q6ZW05 AC113618.1-201ENST00000416747 285 ntBASIC3.04□□□□□ -1.92
PTCHD4Q6ZW05 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.04□□□□□ -1.92
PTCHD4Q6ZW05 AC124916.1-201ENST00000444020 547 ntBASIC3.04□□□□□ -1.92
PTCHD4Q6ZW05 Z96811.1-201ENST00000445880 108 ntBASIC3.04□□□□□ -1.92
PTCHD4Q6ZW05 AC115115.1-201ENST00000449927 248 ntBASIC3.04□□□□□ -1.92
PTCHD4Q6ZW05 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.04□□□□□ -1.92
PTCHD4Q6ZW05 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.04□□□□□ -1.92
PTCHD4Q6ZW05 SNORA25.10-201ENST00000515926 124 ntBASIC3.04□□□□□ -1.92
PTCHD4Q6ZW05 RNU1-95P-201ENST00000516357 160 ntBASIC3.04□□□□□ -1.92
PTCHD4Q6ZW05 RNU1-128P-201ENST00000516704 160 ntBASIC3.04□□□□□ -1.92
PTCHD4Q6ZW05 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.04□□□□□ -1.92
PTCHD4Q6ZW05 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.04□□□□□ -1.92
PTCHD4Q6ZW05 AC008737.2-201ENST00000599446 118 ntBASIC3.04□□□□□ -1.92
PTCHD4Q6ZW05 AC002064.3-201ENST00000623448 346 ntBASIC3.04□□□□□ -1.92
PTCHD4Q6ZW05 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
PTCHD4Q6ZW05 GABRG2-229ENST00000641017 3628 ntBASIC3.04□□□□□ -1.92
PTCHD4Q6ZW05 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PTCHD4Q6ZW05 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PTCHD4Q6ZW05 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
PTCHD4Q6ZW05 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PTCHD4Q6ZW05 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.03□□□□□ -1.92
PTCHD4Q6ZW05 ZNF299P-201ENST00000406845 1804 ntBASIC3.03□□□□□ -1.92
PTCHD4Q6ZW05 Y_RNA.123-201ENST00000363338 102 ntBASIC3.03□□□□□ -1.92
PTCHD4Q6ZW05 Y_RNA.145-201ENST00000363527 102 ntBASIC3.03□□□□□ -1.92
PTCHD4Q6ZW05 SNORA5A-201ENST00000384111 134 ntBASIC3.03□□□□□ -1.92
PTCHD4Q6ZW05 SNORA57.1-201ENST00000391227 145 ntBASIC3.03□□□□□ -1.92
PTCHD4Q6ZW05 AP000275.1-201ENST00000411943 390 ntBASIC3.03□□□□□ -1.92
PTCHD4Q6ZW05 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.03□□□□□ -1.92
PTCHD4Q6ZW05 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.03□□□□□ -1.92
PTCHD4Q6ZW05 RPS15AP5-201ENST00000436276 388 ntBASIC3.03□□□□□ -1.92
PTCHD4Q6ZW05 AC099799.1-201ENST00000439809 192 ntBASIC3.03□□□□□ -1.92
PTCHD4Q6ZW05 AC243964.1-201ENST00000441814 261 ntBASIC3.03□□□□□ -1.92
PTCHD4Q6ZW05 AC025518.1-201ENST00000479856 347 ntBASIC3.03□□□□□ -1.92
PTCHD4Q6ZW05 SCARNA20.6-201ENST00000517251 106 ntBASIC3.03□□□□□ -1.92
PTCHD4Q6ZW05 AP000889.1-201ENST00000530968 660 ntBASIC3.03□□□□□ -1.92
PTCHD4Q6ZW05 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.03□□□□□ -1.92
PTCHD4Q6ZW05 CR383656.8-201ENST00000549046 145 ntBASIC3.03□□□□□ -1.92
PTCHD4Q6ZW05 MIR5696-201ENST00000578474 85 ntBASIC3.03□□□□□ -1.92
PTCHD4Q6ZW05 AC092447.9-201ENST00000603395 144 ntBASIC3.03□□□□□ -1.92
PTCHD4Q6ZW05 AP001836.1-201ENST00000604675 523 ntBASIC3.03□□□□□ -1.92
PTCHD4Q6ZW05 AC009318.2-201ENST00000610917 651 ntBASIC3.03□□□□□ -1.92
PTCHD4Q6ZW05 uc_338.1-201ENST00000612113 180 ntBASIC3.03□□□□□ -1.92
PTCHD4Q6ZW05 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.03□□□□□ -1.92
PTCHD4Q6ZW05 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.03□□□□□ -1.92
PTCHD4Q6ZW05 Z83843.1-201ENST00000604070 3685 ntBASIC3.03□□□□□ -1.92
PTCHD4Q6ZW05 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
PTCHD4Q6ZW05 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.03□□□□□ -1.92
PTCHD4Q6ZW05 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PTCHD4Q6ZW05 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.03□□□□□ -1.93
PTCHD4Q6ZW05 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.93
PTCHD4Q6ZW05 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PTCHD4Q6ZW05 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
PTCHD4Q6ZW05 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
PTCHD4Q6ZW05 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.02□□□□□ -1.93
PTCHD4Q6ZW05 Y_RNA.314-201ENST00000365114 102 ntBASIC3.02□□□□□ -1.93
PTCHD4Q6ZW05 AL359837.1-201ENST00000381357 287 ntBASIC3.02□□□□□ -1.93
PTCHD4Q6ZW05 AC117470.1-201ENST00000381974 330 ntBASIC3.02□□□□□ -1.93
PTCHD4Q6ZW05 SNORD21-201ENST00000383953 95 ntBASIC3.02□□□□□ -1.93
PTCHD4Q6ZW05 SNORD17-201ENST00000390930 237 ntBASIC3.02□□□□□ -1.93
PTCHD4Q6ZW05 BTF3L4P2-201ENST00000392798 346 ntBASIC3.02□□□□□ -1.93
PTCHD4Q6ZW05 MIR1193-201ENST00000408109 78 ntBASIC3.02□□□□□ -1.93
PTCHD4Q6ZW05 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.02□□□□□ -1.93
PTCHD4Q6ZW05 AC074117.2-201ENST00000417130 397 ntBASIC3.02□□□□□ -1.93
PTCHD4Q6ZW05 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.02□□□□□ -1.93
PTCHD4Q6ZW05 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PTCHD4Q6ZW05 AC079354.2-201ENST00000453523 154 ntBASIC3.02□□□□□ -1.93
PTCHD4Q6ZW05 RNU7-23P-201ENST00000459465 62 ntBASIC3.02□□□□□ -1.93
PTCHD4Q6ZW05 MED28P2-201ENST00000475771 317 ntBASIC3.02□□□□□ -1.93
PTCHD4Q6ZW05 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.02□□□□□ -1.93
PTCHD4Q6ZW05 ACA59.2-201ENST00000517061 156 ntBASIC3.02□□□□□ -1.93
PTCHD4Q6ZW05 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.02□□□□□ -1.93
PTCHD4Q6ZW05 MIR4680-201ENST00000580906 66 ntBASIC3.02□□□□□ -1.93
PTCHD4Q6ZW05 MIR7851-201ENST00000610611 160 ntBASIC3.02□□□□□ -1.93
PTCHD4Q6ZW05 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
PTCHD4Q6ZW05 AC010680.1-201ENST00000590024 3590 ntBASIC3.02□□□□□ -1.93
PTCHD4Q6ZW05 AC138915.1-201ENST00000565427 1685 ntBASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 AC093010.3-201ENST00000570269 15214 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms