Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 RNA5SP341-201ENST00000516261 117 ntBASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 MIR2682-201ENST00000580305 110 ntBASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 BNIP3P16-201ENST00000589779 534 ntBASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 AC008737.2-201ENST00000599446 118 ntBASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 AC009314.1-201ENST00000603871 304 ntBASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 AP000787.2-201ENST00000604432 568 ntBASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 AC093732.2-201ENST00000607950 274 ntBASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 AL162274.2-201ENST00000614406 332 ntBASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 AC091925.1-201ENST00000623204 462 ntBASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 AC018692.3-201ENST00000623929 123 ntBASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.61□□□□□ -1.99
C9orf139Q6ZV77 GABRG2-229ENST00000641017 3628 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 RNU1-70P-201ENST00000362618 164 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 Y_RNA.48-201ENST00000362710 103 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 RNU6-490P-201ENST00000362985 107 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 Y_RNA.145-201ENST00000363527 102 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 RNU6-270P-201ENST00000364131 105 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 RNU6-596P-201ENST00000365395 98 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 RNU6-72P-201ENST00000384285 79 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 RNY1P14-201ENST00000384426 108 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 RNU6-658P-201ENST00000384606 106 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 SNORA41-201ENST00000384675 132 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 AL513475.1-201ENST00000406602 315 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 RNA5SP31-201ENST00000411144 127 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 TOMM20P4-201ENST00000427861 435 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 BX679664.1-201ENST00000434429 253 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 DAP3P1-201ENST00000441522 278 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 HMGN1P18-201ENST00000457642 277 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 FO393415.2-201ENST00000480085 343 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 AC006445.2-201ENST00000510061 472 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 Y_RNA.661-201ENST00000516003 99 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 RNU6-1046P-201ENST00000516538 107 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 RNU6-928P-201ENST00000516876 104 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 NDUFB9P3-201ENST00000521269 501 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 MIR4782-201ENST00000577987 79 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 AP001836.1-201ENST00000604675 523 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 HSPE1P7-201ENST00000604681 321 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 AC083806.3-201ENST00000614016 455 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 AC090617.7-201ENST00000623952 126 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 AC010680.1-201ENST00000590024 3590 ntBASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
C9orf139Q6ZV77 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 RNU6-884P-201ENST00000363889 107 ntBASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 U8.8-201ENST00000365399 135 ntBASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 RNU1-73P-201ENST00000383971 164 ntBASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 RNU6-1032P-201ENST00000384100 107 ntBASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 MIR518D-201ENST00000385014 87 ntBASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 AL356968.1-201ENST00000416622 474 ntBASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 MRPS18CP6-201ENST00000423587 223 ntBASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 AC008267.5-201ENST00000424928 265 ntBASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 RPS15AP10-201ENST00000432472 382 ntBASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 AC098831.1-201ENST00000440661 216 ntBASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 AC011816.1-201ENST00000441346 546 ntBASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 GSTA11P-201ENST00000452866 669 ntBASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 MTATP6P7-201ENST00000453315 681 ntBASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 AC022447.4-201ENST00000504053 364 ntBASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 CBX3P8-201ENST00000532412 525 ntBASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 AMZ2P1-203ENST00000565833 850 ntBASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 AC005899.2-201ENST00000584353 90 ntBASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 AC136443.5-201ENST00000603741 370 ntBASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 SCARNA15.3-201ENST00000626315 122 ntBASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 SCARNA4.1-201ENST00000628597 123 ntBASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 SNORA50A-202ENST00000629536 136 ntBASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.59□□□□□ -1.99
C9orf139Q6ZV77 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
C9orf139Q6ZV77 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms