Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 RNU1-91P-201ENST00000364746 163 ntBASIC2.3□□□□□ -2.04
NHLRC1Q6VVB1 RNU6-622P-201ENST00000384272 103 ntBASIC2.3□□□□□ -2.04
NHLRC1Q6VVB1 Y_RNA.481-201ENST00000384373 102 ntBASIC2.3□□□□□ -2.04
NHLRC1Q6VVB1 RNU6-1106P-201ENST00000390845 107 ntBASIC2.3□□□□□ -2.04
NHLRC1Q6VVB1 SNORD70.1-201ENST00000391007 85 ntBASIC2.3□□□□□ -2.04
NHLRC1Q6VVB1 RPL30P16-201ENST00000419341 429 ntBASIC2.3□□□□□ -2.04
NHLRC1Q6VVB1 NUP35P1-201ENST00000422734 947 ntBASIC2.3□□□□□ -2.04
NHLRC1Q6VVB1 AL590556.1-201ENST00000423231 483 ntBASIC2.3□□□□□ -2.04
NHLRC1Q6VVB1 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.3□□□□□ -2.04
NHLRC1Q6VVB1 AL353572.1-201ENST00000442490 417 ntBASIC2.3□□□□□ -2.04
NHLRC1Q6VVB1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.3□□□□□ -2.04
NHLRC1Q6VVB1 SCARNA18-201ENST00000459004 134 ntBASIC2.3□□□□□ -2.04
NHLRC1Q6VVB1 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.3□□□□□ -2.04
NHLRC1Q6VVB1 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.3□□□□□ -2.04
NHLRC1Q6VVB1 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.3□□□□□ -2.04
NHLRC1Q6VVB1 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.3□□□□□ -2.04
NHLRC1Q6VVB1 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.3□□□□□ -2.04
NHLRC1Q6VVB1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.3□□□□□ -2.04
NHLRC1Q6VVB1 RNU6-506P-201ENST00000516553 94 ntBASIC2.3□□□□□ -2.04
NHLRC1Q6VVB1 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.3□□□□□ -2.04
NHLRC1Q6VVB1 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.3□□□□□ -2.04
NHLRC1Q6VVB1 AC115990.1-201ENST00000526957 301 ntBASIC2.3□□□□□ -2.04
NHLRC1Q6VVB1 AL137161.1-201ENST00000532231 390 ntBASIC2.3□□□□□ -2.04
NHLRC1Q6VVB1 AP003034.1-201ENST00000534621 422 ntBASIC2.3□□□□□ -2.04
NHLRC1Q6VVB1 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
NHLRC1Q6VVB1 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.3□□□□□ -2.04
NHLRC1Q6VVB1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.3□□□□□ -2.04
NHLRC1Q6VVB1 AC007014.2-201ENST00000615581 479 ntBASIC2.3□□□□□ -2.04
NHLRC1Q6VVB1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
NHLRC1Q6VVB1 Y_RNA.1-201ENST00000352915 104 ntBASIC2.29□□□□□ -2.04
NHLRC1Q6VVB1 RNU6-996P-201ENST00000365438 107 ntBASIC2.29□□□□□ -2.04
NHLRC1Q6VVB1 RNU1-138P-201ENST00000384093 164 ntBASIC2.29□□□□□ -2.04
NHLRC1Q6VVB1 RNA5SP210-201ENST00000391034 120 ntBASIC2.29□□□□□ -2.04
NHLRC1Q6VVB1 RNU2-3P-201ENST00000410144 191 ntBASIC2.29□□□□□ -2.04
NHLRC1Q6VVB1 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.29□□□□□ -2.04
NHLRC1Q6VVB1 AC069439.1-201ENST00000494739 167 ntBASIC2.29□□□□□ -2.04
NHLRC1Q6VVB1 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.29□□□□□ -2.04
NHLRC1Q6VVB1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.29□□□□□ -2.04
NHLRC1Q6VVB1 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.29□□□□□ -2.04
NHLRC1Q6VVB1 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.29□□□□□ -2.04
NHLRC1Q6VVB1 AC096725.1-201ENST00000514266 313 ntBASIC2.29□□□□□ -2.04
NHLRC1Q6VVB1 RNA5SP356-201ENST00000515972 94 ntBASIC2.29□□□□□ -2.04
NHLRC1Q6VVB1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.29□□□□□ -2.04
NHLRC1Q6VVB1 AK6P1-201ENST00000540219 478 ntBASIC2.29□□□□□ -2.04
NHLRC1Q6VVB1 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.29□□□□□ -2.04
NHLRC1Q6VVB1 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.29□□□□□ -2.04
NHLRC1Q6VVB1 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.29□□□□□ -2.04
NHLRC1Q6VVB1 AC009233.1-201ENST00000616477 371 ntBASIC2.29□□□□□ -2.04
NHLRC1Q6VVB1 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.29□□□□□ -2.04
NHLRC1Q6VVB1 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.29□□□□□ -2.04
NHLRC1Q6VVB1 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.29□□□□□ -2.04
NHLRC1Q6VVB1 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
NHLRC1Q6VVB1 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 Y_RNA.372-201ENST00000365599 102 ntBASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 MIR29B2-201ENST00000385055 81 ntBASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 MIR95-201ENST00000385072 81 ntBASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 SNORD115-47-201ENST00000391226 86 ntBASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 CALM2P3-201ENST00000400429 449 ntBASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 RPS4XP8-201ENST00000402039 771 ntBASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 RPS4XP7-201ENST00000406274 780 ntBASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 RNA5SP270-201ENST00000411361 118 ntBASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 CYCSP33-201ENST00000414485 327 ntBASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 AL139413.1-201ENST00000421309 217 ntBASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 AC063976.3-201ENST00000426849 329 ntBASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 AL669831.1-202ENST00000428504 417 ntBASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 GTF2IP13-201ENST00000438487 386 ntBASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 AC090515.1-201ENST00000465295 476 ntBASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 AC108078.1-201ENST00000508073 725 ntBASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 RN7SKP219-201ENST00000516825 296 ntBASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 MTND4P7-201ENST00000523876 130 ntBASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 AC060766.3-201ENST00000591442 263 ntBASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 U4.7-201ENST00000638126 106 ntBASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NHLRC1Q6VVB1 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.27□□□□□ -2.05
NHLRC1Q6VVB1 RNU6-859P-201ENST00000362728 107 ntBASIC2.27□□□□□ -2.05
NHLRC1Q6VVB1 RNU5E-4P-201ENST00000364931 120 ntBASIC2.27□□□□□ -2.05
NHLRC1Q6VVB1 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.27□□□□□ -2.05
NHLRC1Q6VVB1 Y_RNA.399-201ENST00000383955 105 ntBASIC2.27□□□□□ -2.05
NHLRC1Q6VVB1 CBX3P9-201ENST00000402326 552 ntBASIC2.27□□□□□ -2.05
NHLRC1Q6VVB1 RNU4-55P-201ENST00000410731 137 ntBASIC2.27□□□□□ -2.05
NHLRC1Q6VVB1 USP9YP18-201ENST00000425912 695 ntBASIC2.27□□□□□ -2.05
NHLRC1Q6VVB1 MTCO2P19-201ENST00000427513 598 ntBASIC2.27□□□□□ -2.05
NHLRC1Q6VVB1 AL121601.2-201ENST00000438019 707 ntBASIC2.27□□□□□ -2.05
NHLRC1Q6VVB1 RPL32P28-201ENST00000443577 397 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms