Protein–RNA interactions for Protein: Q6P9F5

TRIM40, Tripartite motif-containing protein 40, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40Q6P9F5 AC090517.3-201ENST00000625170 141 ntBASIC1.73□□□□□ -2.13
TRIM40Q6P9F5 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 SNORD56.1-201ENST00000362913 68 ntBASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 RNU6-1097P-201ENST00000363586 107 ntBASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 Y_RNA.169-201ENST00000363745 96 ntBASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 RNU6-1274P-201ENST00000384557 107 ntBASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 MIR454-201ENST00000390180 115 ntBASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 CBX3P9-201ENST00000402326 552 ntBASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 RNU6-248P-201ENST00000410720 107 ntBASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 BTF3L4P1-201ENST00000413813 468 ntBASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 AC003989.2-201ENST00000440224 169 ntBASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 PMCHL2-203ENST00000457791 237 ntBASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 RPL23AP42-201ENST00000471152 471 ntBASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 AC010486.2-201ENST00000505572 483 ntBASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 AC116337.1-201ENST00000509680 687 ntBASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 SNORA18.6-201ENST00000516792 115 ntBASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 AC012414.6-201ENST00000568241 401 ntBASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 AC026271.5-201ENST00000577873 130 ntBASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 MIR3618-201ENST00000580330 88 ntBASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 AC245014.2-201ENST00000603689 287 ntBASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 SNRPGP17-201ENST00000603780 214 ntBASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 AL670379.2-201ENST00000604983 252 ntBASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 AC246785.4-201ENST00000605374 287 ntBASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 MIR7843-201ENST00000622274 79 ntBASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 AC007792.1-201ENST00000623023 402 ntBASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
TRIM40Q6P9F5 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 RNU6-1287P-201ENST00000362914 107 ntBASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 RNU6-1159P-201ENST00000362933 107 ntBASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 U3.13-201ENST00000364804 214 ntBASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 RNU5E-7P-201ENST00000365290 117 ntBASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 RNU6-45P-201ENST00000384471 107 ntBASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 RNU6-1060P-201ENST00000384664 107 ntBASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 MIR1-2-201ENST00000384961 85 ntBASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 CYCSP33-201ENST00000414485 327 ntBASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 AL137159.1-201ENST00000452808 512 ntBASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 AL162395.1-201ENST00000457882 422 ntBASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 RNU7-182P-201ENST00000459009 62 ntBASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 RNA5SP233-201ENST00000459153 113 ntBASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 RPL30P12-201ENST00000474666 353 ntBASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 HMGB1P35-201ENST00000503360 598 ntBASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 AC074344.1-201ENST00000512823 224 ntBASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 AC104136.1-201ENST00000512969 394 ntBASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 RNU6-667P-201ENST00000517186 102 ntBASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 RN7SKP256-201ENST00000517201 314 ntBASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 AP002453.2-201ENST00000533503 320 ntBASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 AP000763.2-201ENST00000540641 163 ntBASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 MIR4419B-201ENST00000577260 68 ntBASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 MIR4775-201ENST00000581168 75 ntBASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 AL159153.1-201ENST00000619688 317 ntBASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 SDR42E1P4-201ENST00000620894 481 ntBASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.71□□□□□ -2.14
TRIM40Q6P9F5 MIR676-201ENST00000390702 67 ntBASIC1.7□□□□□ -2.14
TRIM40Q6P9F5 SNORA40.19-201ENST00000390846 128 ntBASIC1.7□□□□□ -2.14
TRIM40Q6P9F5 SNORA40.18-201ENST00000391200 128 ntBASIC1.7□□□□□ -2.14
TRIM40Q6P9F5 RNU2-48P-201ENST00000410694 191 ntBASIC1.7□□□□□ -2.14
TRIM40Q6P9F5 RNU2-32P-201ENST00000411193 191 ntBASIC1.7□□□□□ -2.14
TRIM40Q6P9F5 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.7□□□□□ -2.14
TRIM40Q6P9F5 AC096920.1-201ENST00000423991 241 ntBASIC1.7□□□□□ -2.14
TRIM40Q6P9F5 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.7□□□□□ -2.14
TRIM40Q6P9F5 AC007969.2-201ENST00000441891 191 ntBASIC1.7□□□□□ -2.14
TRIM40Q6P9F5 MTND2P4-201ENST00000445034 1004 ntBASIC1.7□□□□□ -2.14
TRIM40Q6P9F5 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.7□□□□□ -2.14
TRIM40Q6P9F5 KPNA2P1-201ENST00000458289 1591 ntBASIC1.7□□□□□ -2.14
TRIM40Q6P9F5 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.7□□□□□ -2.14
TRIM40Q6P9F5 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.7□□□□□ -2.14
TRIM40Q6P9F5 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.7□□□□□ -2.14
TRIM40Q6P9F5 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.7□□□□□ -2.14
TRIM40Q6P9F5 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.7□□□□□ -2.14
TRIM40Q6P9F5 MIR514B-201ENST00000516774 80 ntBASIC1.7□□□□□ -2.14
TRIM40Q6P9F5 RNU6-295P-201ENST00000516901 104 ntBASIC1.7□□□□□ -2.14
TRIM40Q6P9F5 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.7□□□□□ -2.14
TRIM40Q6P9F5 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.7□□□□□ -2.14
TRIM40Q6P9F5 AP003392.2-201ENST00000527269 208 ntBASIC1.7□□□□□ -2.14
TRIM40Q6P9F5 CYCSP27-201ENST00000527643 293 ntBASIC1.7□□□□□ -2.14
TRIM40Q6P9F5 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.7□□□□□ -2.14
TRIM40Q6P9F5 MIR4287-201ENST00000579398 78 ntBASIC1.7□□□□□ -2.14
TRIM40Q6P9F5 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.7□□□□□ -2.14
TRIM40Q6P9F5 CLIC4P2-201ENST00000601934 717 ntBASIC1.7□□□□□ -2.14
TRIM40Q6P9F5 AL096840.1-201ENST00000603287 93 ntBASIC1.7□□□□□ -2.14
TRIM40Q6P9F5 SEPT7P9-203ENST00000604116 343 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms