Protein–RNA interactions for Protein: Q6P1Q0

LETMD1, LETM1 domain-containing protein 1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1Q6P1Q0 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
LETMD1Q6P1Q0 RNU6-50P-201ENST00000362356 103 ntBASIC3.89□□□□□ -1.79
LETMD1Q6P1Q0 SNORA60-201ENST00000362396 134 ntBASIC3.89□□□□□ -1.79
LETMD1Q6P1Q0 Y_RNA.170-201ENST00000363746 110 ntBASIC3.89□□□□□ -1.79
LETMD1Q6P1Q0 RNA5SP189-201ENST00000364920 115 ntBASIC3.89□□□□□ -1.79
LETMD1Q6P1Q0 RNU6-1280P-201ENST00000365211 107 ntBASIC3.89□□□□□ -1.79
LETMD1Q6P1Q0 Y_RNA.331-201ENST00000365267 102 ntBASIC3.89□□□□□ -1.79
LETMD1Q6P1Q0 RNU6-1289P-201ENST00000384431 106 ntBASIC3.89□□□□□ -1.79
LETMD1Q6P1Q0 SNORA46.1-201ENST00000391069 153 ntBASIC3.89□□□□□ -1.79
LETMD1Q6P1Q0 RN7SKP51-201ENST00000410781 304 ntBASIC3.89□□□□□ -1.79
LETMD1Q6P1Q0 RPL19P1-201ENST00000411635 428 ntBASIC3.89□□□□□ -1.79
LETMD1Q6P1Q0 HSPE1P12-201ENST00000412576 301 ntBASIC3.89□□□□□ -1.79
LETMD1Q6P1Q0 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.89□□□□□ -1.79
LETMD1Q6P1Q0 DNAJC19P7-201ENST00000428811 344 ntBASIC3.89□□□□□ -1.79
LETMD1Q6P1Q0 SETP5-201ENST00000437270 562 ntBASIC3.89□□□□□ -1.79
LETMD1Q6P1Q0 POLR2KP2-201ENST00000438155 177 ntBASIC3.89□□□□□ -1.79
LETMD1Q6P1Q0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.89□□□□□ -1.79
LETMD1Q6P1Q0 MRPS10P1-201ENST00000448483 130 ntBASIC3.89□□□□□ -1.79
LETMD1Q6P1Q0 RPL23AP3-201ENST00000453844 468 ntBASIC3.89□□□□□ -1.79
LETMD1Q6P1Q0 AC020593.1-201ENST00000507399 299 ntBASIC3.89□□□□□ -1.79
LETMD1Q6P1Q0 RNA5SP468-201ENST00000516782 93 ntBASIC3.89□□□□□ -1.79
LETMD1Q6P1Q0 AC006001.4-201ENST00000622243 395 ntBASIC3.89□□□□□ -1.79
LETMD1Q6P1Q0 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.89□□□□□ -1.79
LETMD1Q6P1Q0 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LETMD1Q6P1Q0 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LETMD1Q6P1Q0 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.88□□□□□ -1.79
LETMD1Q6P1Q0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.88□□□□□ -1.79
LETMD1Q6P1Q0 Y_RNA.233-201ENST00000364407 101 ntBASIC3.88□□□□□ -1.79
LETMD1Q6P1Q0 RNA5SP240-201ENST00000365355 128 ntBASIC3.88□□□□□ -1.79
LETMD1Q6P1Q0 Y_RNA.383-201ENST00000383855 97 ntBASIC3.88□□□□□ -1.79
LETMD1Q6P1Q0 MIR1251-201ENST00000408552 70 ntBASIC3.88□□□□□ -1.79
LETMD1Q6P1Q0 RNA5SP129-201ENST00000410276 118 ntBASIC3.88□□□□□ -1.79
LETMD1Q6P1Q0 RHEBP3-201ENST00000411920 351 ntBASIC3.88□□□□□ -1.79
LETMD1Q6P1Q0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.88□□□□□ -1.79
LETMD1Q6P1Q0 NDUFS5P3-201ENST00000450668 321 ntBASIC3.88□□□□□ -1.79
LETMD1Q6P1Q0 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.88□□□□□ -1.79
LETMD1Q6P1Q0 snoU13.6-201ENST00000458785 104 ntBASIC3.88□□□□□ -1.79
LETMD1Q6P1Q0 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.88□□□□□ -1.79
LETMD1Q6P1Q0 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.88□□□□□ -1.79
LETMD1Q6P1Q0 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.88□□□□□ -1.79
LETMD1Q6P1Q0 RN7SL600P-201ENST00000581811 299 ntBASIC3.88□□□□□ -1.79
LETMD1Q6P1Q0 MIR3138-201ENST00000585238 82 ntBASIC3.88□□□□□ -1.79
LETMD1Q6P1Q0 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.88□□□□□ -1.79
LETMD1Q6P1Q0 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LETMD1Q6P1Q0 AC005176.2-201ENST00000596933 147 ntBASIC3.88□□□□□ -1.79
LETMD1Q6P1Q0 AC244505.7-201ENST00000599675 272 ntBASIC3.88□□□□□ -1.79
LETMD1Q6P1Q0 MZT1P2-201ENST00000604387 248 ntBASIC3.88□□□□□ -1.79
LETMD1Q6P1Q0 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.88□□□□□ -1.79
LETMD1Q6P1Q0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.88□□□□□ -1.79
LETMD1Q6P1Q0 U6.106-201ENST00000636360 105 ntBASIC3.88□□□□□ -1.79
LETMD1Q6P1Q0 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
LETMD1Q6P1Q0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.88□□□□□ -1.79
LETMD1Q6P1Q0 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
LETMD1Q6P1Q0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LETMD1Q6P1Q0 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 AC092268.1-201ENST00000342691 405 ntBASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 RNA5SP197-201ENST00000363357 119 ntBASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 RNU6-918P-201ENST00000391219 106 ntBASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 RPL23AP36-201ENST00000413895 458 ntBASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 AC078809.1-201ENST00000427601 140 ntBASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 AC007395.1-201ENST00000451333 677 ntBASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 AP000705.1-201ENST00000454567 350 ntBASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 SNORD2.1-201ENST00000458762 69 ntBASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 RPL21P104-201ENST00000464143 478 ntBASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 AC105137.1-201ENST00000484355 562 ntBASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 AC023141.12-201ENST00000512399 199 ntBASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 RNU6-581P-201ENST00000516214 105 ntBASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 CKS1BP7-201ENST00000522230 235 ntBASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 AC021231.3-201ENST00000558497 370 ntBASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 AC009163.5-201ENST00000575421 637 ntBASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 IPO5P1-202ENST00000600039 287 ntBASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 AL359198.2-201ENST00000611836 194 ntBASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 AL357075.2-201ENST00000614906 189 ntBASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 FAM35BP-202ENST00000497389 3337 ntBASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LETMD1Q6P1Q0 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.86□□□□□ -1.79
LETMD1Q6P1Q0 LINC02471-203ENST00000641941 4752 ntBASIC3.86□□□□□ -1.79
LETMD1Q6P1Q0 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LETMD1Q6P1Q0 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LETMD1Q6P1Q0 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LETMD1Q6P1Q0 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LETMD1Q6P1Q0 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LETMD1Q6P1Q0 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
LETMD1Q6P1Q0 RNU6-873P-201ENST00000363833 107 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms