Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 AL137843.1-201ENST00000605078 385 ntBASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 Y_RNA.772-201ENST00000606692 102 ntBASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 MIR7851-201ENST00000610611 160 ntBASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 MIR7112-201ENST00000616126 65 ntBASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 FAM35DP-201ENST00000323387 2712 ntBASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PRPF40BQ6NWY9 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PRPF40BQ6NWY9 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PRPF40BQ6NWY9 RNU1-18P-201ENST00000363062 164 ntBASIC4.49□□□□□ -1.69
PRPF40BQ6NWY9 RNY3P4-201ENST00000384428 101 ntBASIC4.49□□□□□ -1.69
PRPF40BQ6NWY9 RNU6-140P-201ENST00000384566 108 ntBASIC4.49□□□□□ -1.69
PRPF40BQ6NWY9 SNORA48.5-201ENST00000391143 135 ntBASIC4.49□□□□□ -1.69
PRPF40BQ6NWY9 RPL23AP22-201ENST00000437556 453 ntBASIC4.49□□□□□ -1.69
PRPF40BQ6NWY9 NDUFS5P3-201ENST00000450668 321 ntBASIC4.49□□□□□ -1.69
PRPF40BQ6NWY9 RPL23AP94-201ENST00000512518 302 ntBASIC4.49□□□□□ -1.69
PRPF40BQ6NWY9 AP004607.1-201ENST00000524456 203 ntBASIC4.49□□□□□ -1.69
PRPF40BQ6NWY9 AC008011.1-201ENST00000545989 227 ntBASIC4.49□□□□□ -1.69
PRPF40BQ6NWY9 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.49□□□□□ -1.69
PRPF40BQ6NWY9 AC098479.1-201ENST00000609225 154 ntBASIC4.49□□□□□ -1.69
PRPF40BQ6NWY9 AP001282.2-201ENST00000616149 309 ntBASIC4.49□□□□□ -1.69
PRPF40BQ6NWY9 USP8P1-201ENST00000494673 3183 ntBASIC4.49□□□□□ -1.69
PRPF40BQ6NWY9 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PRPF40BQ6NWY9 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PRPF40BQ6NWY9 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PRPF40BQ6NWY9 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PRPF40BQ6NWY9 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.48□□□□□ -1.69
PRPF40BQ6NWY9 Y_RNA.20-201ENST00000362479 113 ntBASIC4.48□□□□□ -1.69
PRPF40BQ6NWY9 SNORA31-201ENST00000362607 130 ntBASIC4.48□□□□□ -1.69
PRPF40BQ6NWY9 Y_RNA.54-201ENST00000362766 105 ntBASIC4.48□□□□□ -1.69
PRPF40BQ6NWY9 RNU6-105P-201ENST00000363909 104 ntBASIC4.48□□□□□ -1.69
PRPF40BQ6NWY9 Y_RNA.237-201ENST00000364439 102 ntBASIC4.48□□□□□ -1.69
PRPF40BQ6NWY9 RNU4-9P-201ENST00000364951 139 ntBASIC4.48□□□□□ -1.69
PRPF40BQ6NWY9 RNU6-968P-201ENST00000384076 107 ntBASIC4.48□□□□□ -1.69
PRPF40BQ6NWY9 RNU6-658P-201ENST00000384606 106 ntBASIC4.48□□□□□ -1.69
PRPF40BQ6NWY9 MIR493-201ENST00000385254 89 ntBASIC4.48□□□□□ -1.69
PRPF40BQ6NWY9 U3.37-201ENST00000408528 213 ntBASIC4.48□□□□□ -1.69
PRPF40BQ6NWY9 RNU2-71P-201ENST00000411395 189 ntBASIC4.48□□□□□ -1.69
PRPF40BQ6NWY9 AP000275.1-201ENST00000411943 390 ntBASIC4.48□□□□□ -1.69
PRPF40BQ6NWY9 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.48□□□□□ -1.69
PRPF40BQ6NWY9 AC004383.1-201ENST00000438135 289 ntBASIC4.48□□□□□ -1.69
PRPF40BQ6NWY9 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.48□□□□□ -1.69
PRPF40BQ6NWY9 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.48□□□□□ -1.69
PRPF40BQ6NWY9 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.48□□□□□ -1.69
PRPF40BQ6NWY9 SNORA31.6-201ENST00000516241 130 ntBASIC4.48□□□□□ -1.69
PRPF40BQ6NWY9 DEFB108E-201ENST00000524692 240 ntBASIC4.48□□□□□ -1.69
PRPF40BQ6NWY9 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.48□□□□□ -1.69
PRPF40BQ6NWY9 AC060766.3-201ENST00000591442 263 ntBASIC4.48□□□□□ -1.69
PRPF40BQ6NWY9 MIR6852-201ENST00000621699 66 ntBASIC4.48□□□□□ -1.69
PRPF40BQ6NWY9 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.48□□□□□ -1.69
PRPF40BQ6NWY9 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.48□□□□□ -1.69
PRPF40BQ6NWY9 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PRPF40BQ6NWY9 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.48□□□□□ -1.69
PRPF40BQ6NWY9 RNU6-50P-201ENST00000362356 103 ntBASIC4.47□□□□□ -1.69
PRPF40BQ6NWY9 MIR215-201ENST00000384858 110 ntBASIC4.47□□□□□ -1.69
PRPF40BQ6NWY9 RNU6-1245P-201ENST00000411130 106 ntBASIC4.47□□□□□ -1.69
PRPF40BQ6NWY9 AL590135.1-201ENST00000422215 156 ntBASIC4.47□□□□□ -1.69
PRPF40BQ6NWY9 AL512844.2-201ENST00000433990 593 ntBASIC4.47□□□□□ -1.69
PRPF40BQ6NWY9 AL139109.1-201ENST00000455491 297 ntBASIC4.47□□□□□ -1.69
PRPF40BQ6NWY9 AC010265.1-201ENST00000513509 211 ntBASIC4.47□□□□□ -1.69
PRPF40BQ6NWY9 MIR2114-201ENST00000516645 80 ntBASIC4.47□□□□□ -1.69
PRPF40BQ6NWY9 RNU6-182P-201ENST00000516970 105 ntBASIC4.47□□□□□ -1.69
PRPF40BQ6NWY9 AP004242.1-201ENST00000533701 349 ntBASIC4.47□□□□□ -1.69
PRPF40BQ6NWY9 AP002770.2-201ENST00000543613 532 ntBASIC4.47□□□□□ -1.69
PRPF40BQ6NWY9 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.47□□□□□ -1.69
PRPF40BQ6NWY9 MIR4300-201ENST00000581016 96 ntBASIC4.47□□□□□ -1.69
PRPF40BQ6NWY9 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.47□□□□□ -1.69
PRPF40BQ6NWY9 AC097372.5-201ENST00000623665 376 ntBASIC4.47□□□□□ -1.69
PRPF40BQ6NWY9 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PRPF40BQ6NWY9 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.47□□□□□ -1.69
PRPF40BQ6NWY9 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.69
PRPF40BQ6NWY9 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.46□□□□□ -1.69
PRPF40BQ6NWY9 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PRPF40BQ6NWY9 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
PRPF40BQ6NWY9 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PRPF40BQ6NWY9 MIR335-201ENST00000362173 94 ntBASIC4.46□□□□□ -1.7
PRPF40BQ6NWY9 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
PRPF40BQ6NWY9 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PRPF40BQ6NWY9 SNORD78.2-201ENST00000391076 69 ntBASIC4.46□□□□□ -1.7
PRPF40BQ6NWY9 RNU6-1197P-201ENST00000391183 107 ntBASIC4.46□□□□□ -1.7
PRPF40BQ6NWY9 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.46□□□□□ -1.7
PRPF40BQ6NWY9 TMEM167AP1-201ENST00000423409 219 ntBASIC4.46□□□□□ -1.7
PRPF40BQ6NWY9 BX679664.1-201ENST00000434429 253 ntBASIC4.46□□□□□ -1.7
PRPF40BQ6NWY9 NDUFB1P1-201ENST00000435191 180 ntBASIC4.46□□□□□ -1.7
PRPF40BQ6NWY9 AL353705.4-201ENST00000449661 238 ntBASIC4.46□□□□□ -1.7
PRPF40BQ6NWY9 snoU13.30-201ENST00000458951 104 ntBASIC4.46□□□□□ -1.7
PRPF40BQ6NWY9 RNA5SP468-201ENST00000516782 93 ntBASIC4.46□□□□□ -1.7
PRPF40BQ6NWY9 RN7SKP209-201ENST00000516888 304 ntBASIC4.46□□□□□ -1.7
PRPF40BQ6NWY9 AC022868.1-201ENST00000517767 391 ntBASIC4.46□□□□□ -1.7
PRPF40BQ6NWY9 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.46□□□□□ -1.7
PRPF40BQ6NWY9 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.46□□□□□ -1.7
PRPF40BQ6NWY9 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.46□□□□□ -1.7
PRPF40BQ6NWY9 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.46□□□□□ -1.7
PRPF40BQ6NWY9 ZNF192P1-203ENST00000565888 810 ntBASIC4.46□□□□□ -1.7
PRPF40BQ6NWY9 AC090617.3-201ENST00000573670 475 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms