Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 RBBP8P1-201ENST00000449447 1844 ntBASIC1.96□□□□□ -2.1
ATL3Q6DD88 U8.2-201ENST00000363156 134 ntBASIC1.96□□□□□ -2.1
ATL3Q6DD88 RNU6-234P-201ENST00000365229 104 ntBASIC1.96□□□□□ -2.1
ATL3Q6DD88 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.96□□□□□ -2.1
ATL3Q6DD88 MIR454-201ENST00000390180 115 ntBASIC1.96□□□□□ -2.1
ATL3Q6DD88 RNU6-607P-201ENST00000411283 108 ntBASIC1.96□□□□□ -2.1
ATL3Q6DD88 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.96□□□□□ -2.1
ATL3Q6DD88 CYCSP33-201ENST00000414485 327 ntBASIC1.96□□□□□ -2.1
ATL3Q6DD88 AC008267.5-201ENST00000424928 265 ntBASIC1.96□□□□□ -2.1
ATL3Q6DD88 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.96□□□□□ -2.1
ATL3Q6DD88 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.96□□□□□ -2.1
ATL3Q6DD88 AC244505.5-201ENST00000443639 207 ntBASIC1.96□□□□□ -2.1
ATL3Q6DD88 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.96□□□□□ -2.1
ATL3Q6DD88 AC104058.1-201ENST00000448028 297 ntBASIC1.96□□□□□ -2.1
ATL3Q6DD88 AC079448.1-201ENST00000449377 373 ntBASIC1.96□□□□□ -2.1
ATL3Q6DD88 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.96□□□□□ -2.1
ATL3Q6DD88 AC140059.1-201ENST00000489238 361 ntBASIC1.96□□□□□ -2.1
ATL3Q6DD88 MTND3P25-201ENST00000509243 135 ntBASIC1.96□□□□□ -2.1
ATL3Q6DD88 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.96□□□□□ -2.1
ATL3Q6DD88 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.96□□□□□ -2.1
ATL3Q6DD88 Y_RNA.687-201ENST00000516558 91 ntBASIC1.96□□□□□ -2.1
ATL3Q6DD88 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.96□□□□□ -2.1
ATL3Q6DD88 MTND3P12-201ENST00000559068 328 ntBASIC1.96□□□□□ -2.1
ATL3Q6DD88 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.96□□□□□ -2.1
ATL3Q6DD88 MTCYBP33-201ENST00000575007 1130 ntBASIC1.96□□□□□ -2.1
ATL3Q6DD88 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.96□□□□□ -2.1
ATL3Q6DD88 AC005034.5-201ENST00000604219 466 ntBASIC1.96□□□□□ -2.1
ATL3Q6DD88 MIR98-201ENST00000606724 119 ntBASIC1.96□□□□□ -2.1
ATL3Q6DD88 AC099842.1-201ENST00000619919 596 ntBASIC1.96□□□□□ -2.1
ATL3Q6DD88 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
ATL3Q6DD88 RNU6-181P-201ENST00000363225 107 ntBASIC1.95□□□□□ -2.1
ATL3Q6DD88 RNU6-529P-201ENST00000363383 104 ntBASIC1.95□□□□□ -2.1
ATL3Q6DD88 RNU1-57P-201ENST00000384491 166 ntBASIC1.95□□□□□ -2.1
ATL3Q6DD88 RNU6-1140P-201ENST00000410517 106 ntBASIC1.95□□□□□ -2.1
ATL3Q6DD88 RNA5SP111-201ENST00000411386 101 ntBASIC1.95□□□□□ -2.1
ATL3Q6DD88 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.95□□□□□ -2.1
ATL3Q6DD88 AC074117.2-201ENST00000417130 397 ntBASIC1.95□□□□□ -2.1
ATL3Q6DD88 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.95□□□□□ -2.1
ATL3Q6DD88 PGBD4P6-201ENST00000421501 610 ntBASIC1.95□□□□□ -2.1
ATL3Q6DD88 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.95□□□□□ -2.1
ATL3Q6DD88 AC003989.2-201ENST00000440224 169 ntBASIC1.95□□□□□ -2.1
ATL3Q6DD88 MTND2P4-201ENST00000445034 1004 ntBASIC1.95□□□□□ -2.1
ATL3Q6DD88 USP9YP29-201ENST00000445112 563 ntBASIC1.95□□□□□ -2.1
ATL3Q6DD88 AC012308.1-201ENST00000451232 178 ntBASIC1.95□□□□□ -2.1
ATL3Q6DD88 AC006026.2-201ENST00000457376 180 ntBASIC1.95□□□□□ -2.1
ATL3Q6DD88 AC091965.2-201ENST00000512324 613 ntBASIC1.95□□□□□ -2.1
ATL3Q6DD88 SNORA43.2-201ENST00000516652 128 ntBASIC1.95□□□□□ -2.1
ATL3Q6DD88 RNU6-445P-201ENST00000516949 107 ntBASIC1.95□□□□□ -2.1
ATL3Q6DD88 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.95□□□□□ -2.1
ATL3Q6DD88 AP004607.1-201ENST00000524456 203 ntBASIC1.95□□□□□ -2.1
ATL3Q6DD88 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.95□□□□□ -2.1
ATL3Q6DD88 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.95□□□□□ -2.1
ATL3Q6DD88 AP005435.4-201ENST00000529514 284 ntBASIC1.95□□□□□ -2.1
ATL3Q6DD88 RANP3-201ENST00000530970 276 ntBASIC1.95□□□□□ -2.1
ATL3Q6DD88 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.95□□□□□ -2.1
ATL3Q6DD88 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.95□□□□□ -2.1
ATL3Q6DD88 MIR3913-1-201ENST00000577744 102 ntBASIC1.95□□□□□ -2.1
ATL3Q6DD88 AC026271.5-201ENST00000577873 130 ntBASIC1.95□□□□□ -2.1
ATL3Q6DD88 AC021646.1-201ENST00000605469 484 ntBASIC1.95□□□□□ -2.1
ATL3Q6DD88 AC098614.4-201ENST00000607601 462 ntBASIC1.95□□□□□ -2.1
ATL3Q6DD88 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.95□□□□□ -2.1
ATL3Q6DD88 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
ATL3Q6DD88 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
ATL3Q6DD88 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
ATL3Q6DD88 RNU6-858P-201ENST00000362436 107 ntBASIC1.94□□□□□ -2.1
ATL3Q6DD88 RNU6-1159P-201ENST00000362933 107 ntBASIC1.94□□□□□ -2.1
ATL3Q6DD88 RNU6-348P-201ENST00000384386 107 ntBASIC1.94□□□□□ -2.1
ATL3Q6DD88 RNU6-550P-201ENST00000391057 101 ntBASIC1.94□□□□□ -2.1
ATL3Q6DD88 C1DP2-201ENST00000418167 426 ntBASIC1.94□□□□□ -2.1
ATL3Q6DD88 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.94□□□□□ -2.1
ATL3Q6DD88 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.94□□□□□ -2.1
ATL3Q6DD88 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.94□□□□□ -2.1
ATL3Q6DD88 AC132479.1-201ENST00000449160 144 ntBASIC1.94□□□□□ -2.1
ATL3Q6DD88 FDX1P2-201ENST00000450769 375 ntBASIC1.94□□□□□ -2.1
ATL3Q6DD88 HMGB1P30-201ENST00000492455 606 ntBASIC1.94□□□□□ -2.1
ATL3Q6DD88 ANXA2P1-201ENST00000505539 926 ntBASIC1.94□□□□□ -2.1
ATL3Q6DD88 MTCO3P9-201ENST00000506989 781 ntBASIC1.94□□□□□ -2.1
ATL3Q6DD88 AC104136.1-201ENST00000512969 394 ntBASIC1.94□□□□□ -2.1
ATL3Q6DD88 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.94□□□□□ -2.1
ATL3Q6DD88 AC026407.1-201ENST00000518369 204 ntBASIC1.94□□□□□ -2.1
ATL3Q6DD88 AC034114.1-201ENST00000520293 285 ntBASIC1.94□□□□□ -2.1
ATL3Q6DD88 OR5AL2P-201ENST00000532185 920 ntBASIC1.94□□□□□ -2.1
ATL3Q6DD88 MIR4528-201ENST00000577763 90 ntBASIC1.94□□□□□ -2.1
ATL3Q6DD88 MIR5692A1-201ENST00000580523 69 ntBASIC1.94□□□□□ -2.1
ATL3Q6DD88 AC008088.1-201ENST00000580993 280 ntBASIC1.94□□□□□ -2.1
ATL3Q6DD88 Z99497.2-201ENST00000603634 310 ntBASIC1.94□□□□□ -2.1
ATL3Q6DD88 NDUFA8P1-201ENST00000605525 367 ntBASIC1.94□□□□□ -2.1
ATL3Q6DD88 AC087752.4-201ENST00000605911 462 ntBASIC1.94□□□□□ -2.1
ATL3Q6DD88 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
ATL3Q6DD88 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.93□□□□□ -2.1
ATL3Q6DD88 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
ATL3Q6DD88 SNORA25B-201ENST00000365507 128 ntBASIC1.93□□□□□ -2.1
ATL3Q6DD88 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
ATL3Q6DD88 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
ATL3Q6DD88 HMGN2P39-201ENST00000398005 273 ntBASIC1.93□□□□□ -2.1
ATL3Q6DD88 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.93□□□□□ -2.1
ATL3Q6DD88 MTCO2P34-201ENST00000421994 607 ntBASIC1.93□□□□□ -2.1
ATL3Q6DD88 AL669831.1-202ENST00000428504 417 ntBASIC1.93□□□□□ -2.1
ATL3Q6DD88 AL121890.1-201ENST00000435457 205 ntBASIC1.93□□□□□ -2.1
ATL3Q6DD88 GTF2IP13-201ENST00000438487 386 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms