Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 AC009541.1-201ENST00000438279 2662 ntBASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 AL391987.6-201ENST00000305671 199 ntBASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 RNU6-527P-201ENST00000363425 104 ntBASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 SNORD115-32-201ENST00000364079 82 ntBASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 Y_RNA.352-201ENST00000365439 102 ntBASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 RNU6-1245P-201ENST00000411130 106 ntBASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 AL358453.1-201ENST00000422522 250 ntBASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 TMEM167AP1-201ENST00000423409 219 ntBASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 VDAC1P3-201ENST00000434069 851 ntBASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 U3.44-201ENST00000458938 192 ntBASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 RNU7-87P-201ENST00000459343 62 ntBASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 RN7SL93P-201ENST00000463035 293 ntBASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 RPL23AP49-201ENST00000492925 468 ntBASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 RNU6-111P-201ENST00000517179 105 ntBASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 RMST_6.1-201ENST00000611980 203 ntBASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 U2.21-201ENST00000637295 81 ntBASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 AC010733.2-201ENST00000589496 5702 ntBASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.53□□□□□ -1.68
USPL1Q5W0Q7 AL133412.1-201ENST00000380194 2992 ntBASIC4.52□□□□□ -1.69
USPL1Q5W0Q7 FTLP6-201ENST00000355274 422 ntBASIC4.52□□□□□ -1.69
USPL1Q5W0Q7 RNA5SP322-201ENST00000363617 119 ntBASIC4.52□□□□□ -1.69
USPL1Q5W0Q7 RNU1-89P-201ENST00000384592 164 ntBASIC4.52□□□□□ -1.69
USPL1Q5W0Q7 SNORA48.5-201ENST00000391143 135 ntBASIC4.52□□□□□ -1.69
USPL1Q5W0Q7 SNORD58.1-201ENST00000391313 66 ntBASIC4.52□□□□□ -1.69
USPL1Q5W0Q7 AL512844.2-201ENST00000433990 593 ntBASIC4.52□□□□□ -1.69
USPL1Q5W0Q7 NDUFB4P6-201ENST00000436819 366 ntBASIC4.52□□□□□ -1.69
USPL1Q5W0Q7 RPL37P4-201ENST00000448908 268 ntBASIC4.52□□□□□ -1.69
USPL1Q5W0Q7 RNA5SP468-201ENST00000516782 93 ntBASIC4.52□□□□□ -1.69
USPL1Q5W0Q7 RNU6-182P-201ENST00000516970 105 ntBASIC4.52□□□□□ -1.69
USPL1Q5W0Q7 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.52□□□□□ -1.69
USPL1Q5W0Q7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.52□□□□□ -1.69
USPL1Q5W0Q7 AC016256.1-201ENST00000547971 354 ntBASIC4.52□□□□□ -1.69
USPL1Q5W0Q7 MIR4300-201ENST00000581016 96 ntBASIC4.52□□□□□ -1.69
USPL1Q5W0Q7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.52□□□□□ -1.69
USPL1Q5W0Q7 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
USPL1Q5W0Q7 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.52□□□□□ -1.69
USPL1Q5W0Q7 SRP72P2-201ENST00000344851 1979 ntBASIC4.52□□□□□ -1.69
USPL1Q5W0Q7 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.52□□□□□ -1.69
USPL1Q5W0Q7 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
USPL1Q5W0Q7 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
USPL1Q5W0Q7 RNU6-968P-201ENST00000384076 107 ntBASIC4.51□□□□□ -1.69
USPL1Q5W0Q7 MIR708-201ENST00000390708 88 ntBASIC4.51□□□□□ -1.69
USPL1Q5W0Q7 SNORD78.2-201ENST00000391076 69 ntBASIC4.51□□□□□ -1.69
USPL1Q5W0Q7 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.51□□□□□ -1.69
USPL1Q5W0Q7 SUMO1P2-201ENST00000452524 304 ntBASIC4.51□□□□□ -1.69
USPL1Q5W0Q7 RNU5B-3P-201ENST00000516601 115 ntBASIC4.51□□□□□ -1.69
USPL1Q5W0Q7 AC022868.1-201ENST00000517767 391 ntBASIC4.51□□□□□ -1.69
USPL1Q5W0Q7 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.51□□□□□ -1.69
USPL1Q5W0Q7 AC009779.6-201ENST00000603972 165 ntBASIC4.51□□□□□ -1.69
USPL1Q5W0Q7 AL137843.1-201ENST00000605078 385 ntBASIC4.51□□□□□ -1.69
USPL1Q5W0Q7 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
USPL1Q5W0Q7 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.51□□□□□ -1.69
USPL1Q5W0Q7 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
USPL1Q5W0Q7 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
USPL1Q5W0Q7 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.5□□□□□ -1.69
USPL1Q5W0Q7 AC090740.1-201ENST00000623193 2262 ntBASIC4.5□□□□□ -1.69
USPL1Q5W0Q7 RNU6-50P-201ENST00000362356 103 ntBASIC4.5□□□□□ -1.69
USPL1Q5W0Q7 RNU6-1286P-201ENST00000383871 107 ntBASIC4.5□□□□□ -1.69
USPL1Q5W0Q7 RNU6-17P-201ENST00000384245 107 ntBASIC4.5□□□□□ -1.69
USPL1Q5W0Q7 RNU6-18P-201ENST00000384527 107 ntBASIC4.5□□□□□ -1.69
USPL1Q5W0Q7 MIR518D-201ENST00000385014 87 ntBASIC4.5□□□□□ -1.69
USPL1Q5W0Q7 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.5□□□□□ -1.69
USPL1Q5W0Q7 RNA5SP239-201ENST00000410218 129 ntBASIC4.5□□□□□ -1.69
USPL1Q5W0Q7 HMGN2P30-201ENST00000423237 256 ntBASIC4.5□□□□□ -1.69
USPL1Q5W0Q7 RPS6P12-201ENST00000432491 726 ntBASIC4.5□□□□□ -1.69
USPL1Q5W0Q7 SUMO1P3-201ENST00000439961 304 ntBASIC4.5□□□□□ -1.69
USPL1Q5W0Q7 RPL21P104-201ENST00000464143 478 ntBASIC4.5□□□□□ -1.69
USPL1Q5W0Q7 AC098869.1-201ENST00000481627 292 ntBASIC4.5□□□□□ -1.69
USPL1Q5W0Q7 AC093663.1-201ENST00000497190 394 ntBASIC4.5□□□□□ -1.69
USPL1Q5W0Q7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.5□□□□□ -1.69
USPL1Q5W0Q7 PHBP14-201ENST00000512887 367 ntBASIC4.5□□□□□ -1.69
USPL1Q5W0Q7 RNU6-138P-201ENST00000515952 107 ntBASIC4.5□□□□□ -1.69
USPL1Q5W0Q7 RNU6-1012P-201ENST00000516606 109 ntBASIC4.5□□□□□ -1.69
USPL1Q5W0Q7 AL365434.2-201ENST00000607979 234 ntBASIC4.5□□□□□ -1.69
USPL1Q5W0Q7 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.5□□□□□ -1.69
USPL1Q5W0Q7 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.5□□□□□ -1.69
USPL1Q5W0Q7 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
USPL1Q5W0Q7 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 FAM35BP-202ENST00000497389 3337 ntBASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 snoU2_19.2-201ENST00000363024 80 ntBASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 RNU1-18P-201ENST00000363062 164 ntBASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 RNU6-778P-201ENST00000363269 103 ntBASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 RNY1-201ENST00000364228 113 ntBASIC4.49□□□□□ -1.69
USPL1Q5W0Q7 Y_RNA.237-201ENST00000364439 102 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms