Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 MIR5692C1-201ENST00000585309 91 ntBASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 BNIP3P25-201ENST00000596023 559 ntBASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 AC024153.1-201ENST00000603103 365 ntBASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 AL356280.1-201ENST00000603614 379 ntBASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.45□□□□□ -2.02
PDLIM3Q53GG5 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 CDC27P3-201ENST00000635418 1910 ntBASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 SNORD56.1-201ENST00000362913 68 ntBASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 RNU6-428P-201ENST00000362942 107 ntBASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 RNU6-527P-201ENST00000363425 104 ntBASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 Y_RNA.167-201ENST00000363735 109 ntBASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 RNU6-82P-201ENST00000363970 107 ntBASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 Y_RNA.390-201ENST00000383932 102 ntBASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 EIF4E2P1-201ENST00000393781 255 ntBASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 RAP1BP3-201ENST00000407180 549 ntBASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 RNU6-1140P-201ENST00000410517 106 ntBASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 Z98742.2-201ENST00000431564 187 ntBASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 AC105272.1-201ENST00000438604 198 ntBASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 RBMX2P4-201ENST00000441256 376 ntBASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 AP001324.2-201ENST00000461163 319 ntBASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 SNRPGP7-201ENST00000469016 106 ntBASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 AC008628.2-201ENST00000502605 298 ntBASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 AC108210.2-201ENST00000503681 201 ntBASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 RNU6-991P-201ENST00000516168 107 ntBASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 AC107953.1-201ENST00000522216 297 ntBASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 MTCO3P23-201ENST00000561363 289 ntBASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 AC060780.3-201ENST00000589464 80 ntBASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 AL121917.1-203ENST00000605534 577 ntBASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 AC069234.5-201ENST00000611056 416 ntBASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 AL359198.2-201ENST00000611836 194 ntBASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 AL136221.1-201ENST00000621449 509 ntBASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.44□□□□□ -2.02
PDLIM3Q53GG5 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 RNU6-78P-201ENST00000362897 107 ntBASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 SNORA71.1-201ENST00000364523 117 ntBASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 RNU6-1283P-201ENST00000365314 105 ntBASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 RNU6-827P-201ENST00000365553 106 ntBASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 SNORD88.1-201ENST00000408684 91 ntBASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 RNU6-1148P-201ENST00000410992 104 ntBASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 AL451074.5-201ENST00000415894 435 ntBASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 RPS29P6-201ENST00000438196 145 ntBASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 AC108938.1-201ENST00000451204 136 ntBASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 RPL39P5-202ENST00000512505 151 ntBASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 RNU5F-8P-201ENST00000515941 111 ntBASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 SNORA43.2-201ENST00000516652 128 ntBASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 CYCSP27-201ENST00000527643 293 ntBASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 AC103996.1-201ENST00000555468 102 ntBASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 AC015712.3-201ENST00000559380 164 ntBASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 AC009163.5-201ENST00000575421 637 ntBASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 MIR5194-201ENST00000582634 120 ntBASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 AC006504.8-201ENST00000621046 635 ntBASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 Z69720.2-201ENST00000624755 279 ntBASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 SCARNA4-202ENST00000625402 129 ntBASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 MAPK10-266ENST00000641066 6555 ntBASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.43□□□□□ -2.02
PDLIM3Q53GG5 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
PDLIM3Q53GG5 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PDLIM3Q53GG5 U8.2-201ENST00000363156 134 ntBASIC2.42□□□□□ -2.02
PDLIM3Q53GG5 Y_RNA.157-201ENST00000363638 102 ntBASIC2.42□□□□□ -2.02
PDLIM3Q53GG5 MT-TL1-201ENST00000386347 75 ntBASIC2.42□□□□□ -2.02
PDLIM3Q53GG5 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.42□□□□□ -2.02
PDLIM3Q53GG5 SNORD56-201ENST00000413522 71 ntBASIC2.42□□□□□ -2.02
PDLIM3Q53GG5 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.42□□□□□ -2.02
PDLIM3Q53GG5 AL096701.2-201ENST00000416920 238 ntBASIC2.42□□□□□ -2.02
PDLIM3Q53GG5 AC138623.1-201ENST00000418060 216 ntBASIC2.42□□□□□ -2.02
PDLIM3Q53GG5 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.42□□□□□ -2.02
PDLIM3Q53GG5 AL513185.2-201ENST00000425543 193 ntBASIC2.42□□□□□ -2.02
PDLIM3Q53GG5 AC063976.3-201ENST00000426849 329 ntBASIC2.42□□□□□ -2.02
PDLIM3Q53GG5 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.42□□□□□ -2.02
PDLIM3Q53GG5 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.42□□□□□ -2.02
PDLIM3Q53GG5 AC004383.1-201ENST00000438135 289 ntBASIC2.42□□□□□ -2.02
PDLIM3Q53GG5 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.42□□□□□ -2.02
PDLIM3Q53GG5 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms