Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 AL157871.3-201ENST00000557231 293 ntBASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 FRG2DP-202ENST00000566967 323 ntBASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 AC138761.3-201ENST00000579993 334 ntBASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 AL359757.2-201ENST00000624309 274 ntBASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.39□□□□□ -2.03
SNAI3Q3KNW1 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 AL359693.1-201ENST00000614959 2407 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 Y_RNA.33-201ENST00000362591 102 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 RNU6-562P-201ENST00000362731 107 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 RNU6-461P-201ENST00000364195 107 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 Y_RNA.333-201ENST00000365274 102 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 RNU6-395P-201ENST00000365662 106 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 RNU1-73P-201ENST00000383971 164 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 RNU6-128P-201ENST00000383976 107 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 RNU6-1297P-201ENST00000384415 104 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 SNORD116-29-201ENST00000384516 83 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 RNU6-1179P-201ENST00000384667 107 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 MIR128-1-201ENST00000384921 82 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 AL512633.1-201ENST00000399931 655 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 RPL37P10-201ENST00000412884 288 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 AL139396.1-201ENST00000421137 167 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 AF228730.4-201ENST00000421457 183 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 MYL8P-204ENST00000431574 518 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 SNAP23P1-201ENST00000433229 246 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 AL135938.1-201ENST00000443141 297 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 RPS27P27-201ENST00000498779 255 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 RNU1-86P-201ENST00000516108 154 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 RNU6-559P-201ENST00000516151 98 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 RNU1-103P-201ENST00000516502 125 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 RNU1-107P-201ENST00000516617 154 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 Y_RNA.718-201ENST00000517110 102 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 AC087854.1-201ENST00000519706 414 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 RNU6-323P-201ENST00000521915 107 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 IMMP1LP2-201ENST00000552954 492 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 AC100830.2-201ENST00000581636 240 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 AC093732.2-201ENST00000607950 274 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 RMST_4.1-201ENST00000616886 107 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 AC126177.8-201ENST00000618339 1015 ntBASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
SNAI3Q3KNW1 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 RNU6-778P-201ENST00000363269 103 ntBASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 Y_RNA.259-201ENST00000364619 101 ntBASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 MIR491-201ENST00000384877 84 ntBASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 RNU6-750P-201ENST00000390946 107 ntBASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 AL513475.1-201ENST00000406602 315 ntBASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 MIR1302-11-201ENST00000408051 138 ntBASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 MIR1302-9-201ENST00000408365 138 ntBASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 MIR1302-10-201ENST00000408734 138 ntBASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 RNU6-1025P-201ENST00000410629 104 ntBASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 NDUFS5P4-201ENST00000412983 318 ntBASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 AC006946.1-201ENST00000429106 328 ntBASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 AC005534.2-201ENST00000431047 433 ntBASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 MTCYBP6-201ENST00000441810 138 ntBASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 AL359672.1-201ENST00000442302 409 ntBASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 RPS3AP12-201ENST00000443616 753 ntBASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 RN7SL297P-201ENST00000483161 293 ntBASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 RPL39P5-202ENST00000512505 151 ntBASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 RNU6-1332P-201ENST00000516666 104 ntBASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 AC009902.1-201ENST00000519351 183 ntBASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 AP005597.4-201ENST00000526762 229 ntBASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 MIR3117-201ENST00000584034 78 ntBASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 MIR1302-2-201ENST00000607096 138 ntBASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 MTND4LP32-201ENST00000636111 270 ntBASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 U2.21-201ENST00000637295 81 ntBASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 Z82195.2-201ENST00000612348 18351 ntBASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 AC110491.1-201ENST00000562191 2010 ntBASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SNAI3Q3KNW1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.36□□□□□ -2.03
SNAI3Q3KNW1 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 186 ms