Protein–RNA interactions for Protein: Q15459

SF3A1, Splicing factor 3A subunit 1, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1Q15459 HMGN1P13-201ENST00000505795 138 ntBASIC3.94□□□□□ -1.78
SF3A1Q15459 AC110768.1-201ENST00000509222 400 ntBASIC3.94□□□□□ -1.78
SF3A1Q15459 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.94□□□□□ -1.78
SF3A1Q15459 SCARNA16.2-201ENST00000516520 172 ntBASIC3.94□□□□□ -1.78
SF3A1Q15459 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.94□□□□□ -1.78
SF3A1Q15459 AL161756.2-201ENST00000604597 246 ntBASIC3.94□□□□□ -1.78
SF3A1Q15459 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SF3A1Q15459 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SF3A1Q15459 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.94□□□□□ -1.78
SF3A1Q15459 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
SF3A1Q15459 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SF3A1Q15459 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SF3A1Q15459 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SF3A1Q15459 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.93□□□□□ -1.78
SF3A1Q15459 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SF3A1Q15459 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.93□□□□□ -1.78
SF3A1Q15459 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SF3A1Q15459 RNU6-968P-201ENST00000384076 107 ntBASIC3.93□□□□□ -1.78
SF3A1Q15459 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SF3A1Q15459 RNU6-174P-201ENST00000410406 106 ntBASIC3.93□□□□□ -1.78
SF3A1Q15459 RPS20P15-201ENST00000412792 311 ntBASIC3.93□□□□□ -1.78
SF3A1Q15459 AL356968.1-201ENST00000416622 474 ntBASIC3.93□□□□□ -1.78
SF3A1Q15459 AC097463.2-201ENST00000421074 142 ntBASIC3.93□□□□□ -1.78
SF3A1Q15459 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.93□□□□□ -1.78
SF3A1Q15459 BX276092.3-201ENST00000424182 230 ntBASIC3.93□□□□□ -1.78
SF3A1Q15459 BX679664.1-201ENST00000434429 253 ntBASIC3.93□□□□□ -1.78
SF3A1Q15459 AC244670.1-201ENST00000436879 112 ntBASIC3.93□□□□□ -1.78
SF3A1Q15459 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.93□□□□□ -1.78
SF3A1Q15459 GPM6BP3-201ENST00000442797 145 ntBASIC3.93□□□□□ -1.78
SF3A1Q15459 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.93□□□□□ -1.78
SF3A1Q15459 UBE2V1P7-201ENST00000446395 340 ntBASIC3.93□□□□□ -1.78
SF3A1Q15459 AC006445.1-201ENST00000491925 405 ntBASIC3.93□□□□□ -1.78
SF3A1Q15459 AC104564.1-201ENST00000493028 407 ntBASIC3.93□□□□□ -1.78
SF3A1Q15459 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.93□□□□□ -1.78
SF3A1Q15459 AC016632.1-201ENST00000503994 196 ntBASIC3.93□□□□□ -1.78
SF3A1Q15459 RNA5SP384-201ENST00000516615 116 ntBASIC3.93□□□□□ -1.78
SF3A1Q15459 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.93□□□□□ -1.78
SF3A1Q15459 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.93□□□□□ -1.78
SF3A1Q15459 AC079598.5-201ENST00000547460 117 ntBASIC3.93□□□□□ -1.78
SF3A1Q15459 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.93□□□□□ -1.78
SF3A1Q15459 AC103810.1-201ENST00000579873 453 ntBASIC3.93□□□□□ -1.78
SF3A1Q15459 AL133255.1-201ENST00000606374 441 ntBASIC3.93□□□□□ -1.78
SF3A1Q15459 MIR7851-201ENST00000610611 160 ntBASIC3.93□□□□□ -1.78
SF3A1Q15459 AL359198.2-201ENST00000611836 194 ntBASIC3.93□□□□□ -1.78
SF3A1Q15459 AL442067.2-201ENST00000614033 363 ntBASIC3.93□□□□□ -1.78
SF3A1Q15459 AC022140.2-201ENST00000623500 188 ntBASIC3.93□□□□□ -1.78
SF3A1Q15459 AC092608.2-201ENST00000624427 218 ntBASIC3.93□□□□□ -1.78
SF3A1Q15459 AL034408.1-202ENST00000636088 415 ntBASIC3.93□□□□□ -1.78
SF3A1Q15459 AC009093.8-201ENST00000641769 292 ntBASIC3.93□□□□□ -1.78
SF3A1Q15459 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SF3A1Q15459 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.93□□□□□ -1.78
SF3A1Q15459 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
SF3A1Q15459 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SF3A1Q15459 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SF3A1Q15459 Y_RNA.48-201ENST00000362710 103 ntBASIC3.92□□□□□ -1.78
SF3A1Q15459 RNU6-486P-201ENST00000363116 107 ntBASIC3.92□□□□□ -1.78
SF3A1Q15459 RNU6-596P-201ENST00000365395 98 ntBASIC3.92□□□□□ -1.78
SF3A1Q15459 SNORA5A-201ENST00000384111 134 ntBASIC3.92□□□□□ -1.78
SF3A1Q15459 RNU1-57P-201ENST00000384491 166 ntBASIC3.92□□□□□ -1.78
SF3A1Q15459 EIF1AXP1-201ENST00000419267 435 ntBASIC3.92□□□□□ -1.78
SF3A1Q15459 EIF4EP2-201ENST00000422816 654 ntBASIC3.92□□□□□ -1.78
SF3A1Q15459 RPL23AP95-201ENST00000426806 265 ntBASIC3.92□□□□□ -1.78
SF3A1Q15459 TRIAP1P1-201ENST00000427062 225 ntBASIC3.92□□□□□ -1.78
SF3A1Q15459 AC146507.2-201ENST00000460608 476 ntBASIC3.92□□□□□ -1.78
SF3A1Q15459 AC021205.2-201ENST00000480069 347 ntBASIC3.92□□□□□ -1.78
SF3A1Q15459 AC097473.1-201ENST00000508142 408 ntBASIC3.92□□□□□ -1.78
SF3A1Q15459 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.92□□□□□ -1.78
SF3A1Q15459 AC026403.1-201ENST00000518938 295 ntBASIC3.92□□□□□ -1.78
SF3A1Q15459 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.92□□□□□ -1.78
SF3A1Q15459 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.92□□□□□ -1.78
SF3A1Q15459 AC115990.1-201ENST00000526957 301 ntBASIC3.92□□□□□ -1.78
SF3A1Q15459 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.92□□□□□ -1.78
SF3A1Q15459 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.92□□□□□ -1.78
SF3A1Q15459 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.92□□□□□ -1.78
SF3A1Q15459 AC005899.2-201ENST00000584353 90 ntBASIC3.92□□□□□ -1.78
SF3A1Q15459 AC080078.3-201ENST00000605407 463 ntBASIC3.92□□□□□ -1.78
SF3A1Q15459 AL160413.1-201ENST00000622780 310 ntBASIC3.92□□□□□ -1.78
SF3A1Q15459 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SF3A1Q15459 OR56A5-201ENST00000340110 738 ntBASIC3.91□□□□□ -1.78
SF3A1Q15459 RNU1-75P-201ENST00000347264 129 ntBASIC3.91□□□□□ -1.78
SF3A1Q15459 Y_RNA.315-201ENST00000365117 102 ntBASIC3.91□□□□□ -1.78
SF3A1Q15459 RNU6-142P-201ENST00000384019 107 ntBASIC3.91□□□□□ -1.78
SF3A1Q15459 RNU6-784P-201ENST00000384330 106 ntBASIC3.91□□□□□ -1.78
SF3A1Q15459 Y_RNA.533-201ENST00000384596 114 ntBASIC3.91□□□□□ -1.78
SF3A1Q15459 MIR186-201ENST00000384988 86 ntBASIC3.91□□□□□ -1.78
SF3A1Q15459 MIR218-1-201ENST00000384999 110 ntBASIC3.91□□□□□ -1.78
SF3A1Q15459 Y_RNA.579-201ENST00000390939 94 ntBASIC3.91□□□□□ -1.78
SF3A1Q15459 AL353997.1-201ENST00000432936 108 ntBASIC3.91□□□□□ -1.78
SF3A1Q15459 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.91□□□□□ -1.78
SF3A1Q15459 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.91□□□□□ -1.78
SF3A1Q15459 AC096576.1-201ENST00000489014 359 ntBASIC3.91□□□□□ -1.78
SF3A1Q15459 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
SF3A1Q15459 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.91□□□□□ -1.78
SF3A1Q15459 MIR3199-1-201ENST00000582434 88 ntBASIC3.91□□□□□ -1.78
SF3A1Q15459 AC006557.5-201ENST00000603126 811 ntBASIC3.91□□□□□ -1.78
SF3A1Q15459 AC007179.3-201ENST00000604976 235 ntBASIC3.91□□□□□ -1.78
SF3A1Q15459 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
SF3A1Q15459 AC017071.1-201ENST00000564407 2204 ntBASIC3.91□□□□□ -1.78
SF3A1Q15459 MTND5P19-201ENST00000424872 1794 ntBASIC3.91□□□□□ -1.78
SF3A1Q15459 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms