Protein–RNA interactions for Protein: Q13011

ECH1, Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECH1Q13011 AP002453.2-201ENST00000533503 320 ntBASIC1.64□□□□□ -2.15
ECH1Q13011 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.64□□□□□ -2.15
ECH1Q13011 AC018630.3-201ENST00000542637 96 ntBASIC1.64□□□□□ -2.15
ECH1Q13011 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.64□□□□□ -2.15
ECH1Q13011 MIR4299-201ENST00000577899 72 ntBASIC1.64□□□□□ -2.15
ECH1Q13011 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.64□□□□□ -2.15
ECH1Q13011 MIR4287-201ENST00000579398 78 ntBASIC1.64□□□□□ -2.15
ECH1Q13011 MIR4775-201ENST00000581168 75 ntBASIC1.64□□□□□ -2.15
ECH1Q13011 AC098848.2-201ENST00000588023 330 ntBASIC1.64□□□□□ -2.15
ECH1Q13011 AC008250.2-201ENST00000615261 205 ntBASIC1.64□□□□□ -2.15
ECH1Q13011 AC007494.3-201ENST00000624660 743 ntBASIC1.64□□□□□ -2.15
ECH1Q13011 AC002543.1-201ENST00000299783 1954 ntBASIC1.63□□□□□ -2.15
ECH1Q13011 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.63□□□□□ -2.15
ECH1Q13011 AP006437.1-201ENST00000641440 3685 ntBASIC1.63□□□□□ -2.15
ECH1Q13011 RNU6-212P-201ENST00000362642 104 ntBASIC1.63□□□□□ -2.15
ECH1Q13011 SNORA16.1-201ENST00000364597 132 ntBASIC1.63□□□□□ -2.15
ECH1Q13011 RNU6-546P-201ENST00000383991 107 ntBASIC1.63□□□□□ -2.15
ECH1Q13011 RNU6-550P-201ENST00000391057 101 ntBASIC1.63□□□□□ -2.15
ECH1Q13011 RNU4-26P-201ENST00000410270 107 ntBASIC1.63□□□□□ -2.15
ECH1Q13011 SNORD56-201ENST00000413522 71 ntBASIC1.63□□□□□ -2.15
ECH1Q13011 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
ECH1Q13011 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.63□□□□□ -2.15
ECH1Q13011 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
ECH1Q13011 ART2BP-201ENST00000453501 499 ntBASIC1.63□□□□□ -2.15
ECH1Q13011 PRELID3BP1-201ENST00000457142 540 ntBASIC1.63□□□□□ -2.15
ECH1Q13011 PPP1R2P5-201ENST00000457256 603 ntBASIC1.63□□□□□ -2.15
ECH1Q13011 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.63□□□□□ -2.15
ECH1Q13011 RPL30P1-201ENST00000488676 339 ntBASIC1.63□□□□□ -2.15
ECH1Q13011 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.63□□□□□ -2.15
ECH1Q13011 AC117532.1-201ENST00000514638 323 ntBASIC1.63□□□□□ -2.15
ECH1Q13011 SNORD27.1-201ENST00000516319 72 ntBASIC1.63□□□□□ -2.15
ECH1Q13011 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.63□□□□□ -2.15
ECH1Q13011 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.63□□□□□ -2.15
ECH1Q13011 OR5AL2P-201ENST00000532185 920 ntBASIC1.63□□□□□ -2.15
ECH1Q13011 AC022616.8-201ENST00000533569 253 ntBASIC1.63□□□□□ -2.15
ECH1Q13011 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.63□□□□□ -2.15
ECH1Q13011 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.63□□□□□ -2.15
ECH1Q13011 DEFB122-202ENST00000569013 197 ntBASIC1.63□□□□□ -2.15
ECH1Q13011 AC010928.2-201ENST00000588017 287 ntBASIC1.63□□□□□ -2.15
ECH1Q13011 AL136363.2-201ENST00000604173 851 ntBASIC1.63□□□□□ -2.15
ECH1Q13011 AL773524.1-201ENST00000614065 229 ntBASIC1.63□□□□□ -2.15
ECH1Q13011 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.63□□□□□ -2.15
ECH1Q13011 AC007792.1-201ENST00000623023 402 ntBASIC1.63□□□□□ -2.15
ECH1Q13011 Z69720.2-201ENST00000624755 279 ntBASIC1.63□□□□□ -2.15
ECH1Q13011 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.63□□□□□ -2.15
ECH1Q13011 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
ECH1Q13011 AC008555.8-201ENST00000623602 2168 ntBASIC1.62□□□□□ -2.15
ECH1Q13011 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.62□□□□□ -2.15
ECH1Q13011 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
ECH1Q13011 snoU2_19.1-201ENST00000362361 80 ntBASIC1.62□□□□□ -2.15
ECH1Q13011 RNU6-45P-201ENST00000384471 107 ntBASIC1.62□□□□□ -2.15
ECH1Q13011 SNORA40.3-201ENST00000390964 122 ntBASIC1.62□□□□□ -2.15
ECH1Q13011 RNU2-20P-201ENST00000410425 191 ntBASIC1.62□□□□□ -2.15
ECH1Q13011 RPS20P15-201ENST00000412792 311 ntBASIC1.62□□□□□ -2.15
ECH1Q13011 AL158823.1-201ENST00000418441 478 ntBASIC1.62□□□□□ -2.15
ECH1Q13011 AL669831.1-202ENST00000428504 417 ntBASIC1.62□□□□□ -2.15
ECH1Q13011 IFNA20P-201ENST00000436840 528 ntBASIC1.62□□□□□ -2.15
ECH1Q13011 GTF2IP13-201ENST00000438487 386 ntBASIC1.62□□□□□ -2.15
ECH1Q13011 DNAJC19P4-201ENST00000440115 345 ntBASIC1.62□□□□□ -2.15
ECH1Q13011 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.62□□□□□ -2.15
ECH1Q13011 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.62□□□□□ -2.15
ECH1Q13011 AL033528.1-201ENST00000453780 140 ntBASIC1.62□□□□□ -2.15
ECH1Q13011 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.62□□□□□ -2.15
ECH1Q13011 AC060788.1-201ENST00000521318 469 ntBASIC1.62□□□□□ -2.15
ECH1Q13011 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.62□□□□□ -2.15
ECH1Q13011 AC012414.6-201ENST00000568241 401 ntBASIC1.62□□□□□ -2.15
ECH1Q13011 MIR3682-201ENST00000581338 84 ntBASIC1.62□□□□□ -2.15
ECH1Q13011 MIR3945-201ENST00000581853 98 ntBASIC1.62□□□□□ -2.15
ECH1Q13011 AL078605.1-201ENST00000603529 500 ntBASIC1.62□□□□□ -2.15
ECH1Q13011 AC004908.3-201ENST00000610248 625 ntBASIC1.62□□□□□ -2.15
ECH1Q13011 AC091834.1-201ENST00000614543 472 ntBASIC1.62□□□□□ -2.15
ECH1Q13011 AP001506.1-201ENST00000615444 211 ntBASIC1.62□□□□□ -2.15
ECH1Q13011 U4.7-201ENST00000638126 106 ntBASIC1.62□□□□□ -2.15
ECH1Q13011 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.61□□□□□ -2.15
ECH1Q13011 SNORD114-1-201ENST00000362705 72 ntBASIC1.61□□□□□ -2.15
ECH1Q13011 MIR583-201ENST00000384846 75 ntBASIC1.61□□□□□ -2.15
ECH1Q13011 MIR1-2-201ENST00000384961 85 ntBASIC1.61□□□□□ -2.15
ECH1Q13011 RNU6-248P-201ENST00000410720 107 ntBASIC1.61□□□□□ -2.15
ECH1Q13011 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.61□□□□□ -2.15
ECH1Q13011 C1DP2-201ENST00000418167 426 ntBASIC1.61□□□□□ -2.15
ECH1Q13011 MTND2P18-201ENST00000419962 1030 ntBASIC1.61□□□□□ -2.15
ECH1Q13011 BX510359.4-201ENST00000423750 193 ntBASIC1.61□□□□□ -2.15
ECH1Q13011 RPL31P35-201ENST00000431058 377 ntBASIC1.61□□□□□ -2.15
ECH1Q13011 GPR143P-201ENST00000434155 205 ntBASIC1.61□□□□□ -2.15
ECH1Q13011 AC079781.2-201ENST00000446424 169 ntBASIC1.61□□□□□ -2.15
ECH1Q13011 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.61□□□□□ -2.15
ECH1Q13011 RPL39P29-201ENST00000447779 157 ntBASIC1.61□□□□□ -2.15
ECH1Q13011 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.61□□□□□ -2.15
ECH1Q13011 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.61□□□□□ -2.15
ECH1Q13011 AL122001.1-201ENST00000457027 370 ntBASIC1.61□□□□□ -2.15
ECH1Q13011 AL162395.1-201ENST00000457882 422 ntBASIC1.61□□□□□ -2.15
ECH1Q13011 snoU109.1-201ENST00000459339 135 ntBASIC1.61□□□□□ -2.15
ECH1Q13011 SNORD42A-201ENST00000459584 64 ntBASIC1.61□□□□□ -2.15
ECH1Q13011 RPL23AP42-201ENST00000471152 471 ntBASIC1.61□□□□□ -2.15
ECH1Q13011 RPL21P99-201ENST00000480369 423 ntBASIC1.61□□□□□ -2.15
ECH1Q13011 AC074344.1-201ENST00000512823 224 ntBASIC1.61□□□□□ -2.15
ECH1Q13011 AC104136.1-201ENST00000512969 394 ntBASIC1.61□□□□□ -2.15
ECH1Q13011 RNU1-41P-201ENST00000516161 162 ntBASIC1.61□□□□□ -2.15
ECH1Q13011 RNU1-48P-201ENST00000516400 162 ntBASIC1.61□□□□□ -2.15
ECH1Q13011 RNU6-410P-201ENST00000517006 107 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms