Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 PDCD5P2-201ENST00000507570 312 ntBASIC0.34□□□□□ -2.36
CPSF1Q10570 RNU6-927P-201ENST00000516199 100 ntBASIC0.34□□□□□ -2.36
CPSF1Q10570 RNU2-53P-201ENST00000516257 147 ntBASIC0.34□□□□□ -2.36
CPSF1Q10570 RNU4-54P-201ENST00000516428 129 ntBASIC0.34□□□□□ -2.36
CPSF1Q10570 RNU6-885P-201ENST00000516607 104 ntBASIC0.34□□□□□ -2.36
CPSF1Q10570 SNORA70.22-201ENST00000517160 124 ntBASIC0.34□□□□□ -2.36
CPSF1Q10570 AC090142.3-201ENST00000519012 385 ntBASIC0.34□□□□□ -2.36
CPSF1Q10570 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.34□□□□□ -2.36
CPSF1Q10570 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.34□□□□□ -2.36
CPSF1Q10570 AC012065.4-201ENST00000602445 679 ntBASIC0.34□□□□□ -2.36
CPSF1Q10570 MIR6134-201ENST00000617606 109 ntBASIC0.34□□□□□ -2.36
CPSF1Q10570 AC134026.1-201ENST00000623249 2239 ntBASIC0.34□□□□□ -2.36
CPSF1Q10570 RNU6-1167P-201ENST00000363227 94 ntBASIC0.33□□□□□ -2.36
CPSF1Q10570 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.33□□□□□ -2.36
CPSF1Q10570 RNU6-1274P-201ENST00000384557 107 ntBASIC0.33□□□□□ -2.36
CPSF1Q10570 TAF13P2-201ENST00000416876 286 ntBASIC0.33□□□□□ -2.36
CPSF1Q10570 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.33□□□□□ -2.36
CPSF1Q10570 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.33□□□□□ -2.36
CPSF1Q10570 RAD1P2-201ENST00000446414 663 ntBASIC0.33□□□□□ -2.36
CPSF1Q10570 MTND1P16-201ENST00000465177 898 ntBASIC0.33□□□□□ -2.36
CPSF1Q10570 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.33□□□□□ -2.36
CPSF1Q10570 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.33□□□□□ -2.36
CPSF1Q10570 AC136619.2-201ENST00000563361 631 ntBASIC0.33□□□□□ -2.36
CPSF1Q10570 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.33□□□□□ -2.36
CPSF1Q10570 MIR3664-201ENST00000579074 99 ntBASIC0.33□□□□□ -2.36
CPSF1Q10570 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.33□□□□□ -2.36
CPSF1Q10570 7SK.7-201ENST00000603504 247 ntBASIC0.33□□□□□ -2.36
CPSF1Q10570 AC009237.15-201ENST00000610252 501 ntBASIC0.33□□□□□ -2.36
CPSF1Q10570 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.33□□□□□ -2.36
CPSF1Q10570 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
CPSF1Q10570 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.32□□□□□ -2.36
CPSF1Q10570 RNU6-743P-201ENST00000364151 106 ntBASIC0.32□□□□□ -2.36
CPSF1Q10570 SNORA27.3-201ENST00000364937 134 ntBASIC0.32□□□□□ -2.36
CPSF1Q10570 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.32□□□□□ -2.36
CPSF1Q10570 AC019070.1-201ENST00000415008 1024 ntBASIC0.32□□□□□ -2.36
CPSF1Q10570 GPM6BP2-201ENST00000432046 144 ntBASIC0.32□□□□□ -2.36
CPSF1Q10570 MTCO1P57-201ENST00000432182 261 ntBASIC0.32□□□□□ -2.36
CPSF1Q10570 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.32□□□□□ -2.36
CPSF1Q10570 GTF2IP13-201ENST00000438487 386 ntBASIC0.32□□□□□ -2.36
CPSF1Q10570 MTND2P4-201ENST00000445034 1004 ntBASIC0.32□□□□□ -2.36
CPSF1Q10570 GPM6BP1-201ENST00000446387 144 ntBASIC0.32□□□□□ -2.36
CPSF1Q10570 COX6CP6-201ENST00000490840 228 ntBASIC0.32□□□□□ -2.36
CPSF1Q10570 AC091435.1-201ENST00000505442 584 ntBASIC0.32□□□□□ -2.36
CPSF1Q10570 RNA5SP285-201ENST00000516619 119 ntBASIC0.32□□□□□ -2.36
CPSF1Q10570 RNU6-1183P-201ENST00000517054 60 ntBASIC0.32□□□□□ -2.36
CPSF1Q10570 AC090615.1-201ENST00000577519 154 ntBASIC0.32□□□□□ -2.36
CPSF1Q10570 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.32□□□□□ -2.36
CPSF1Q10570 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.32□□□□□ -2.36
CPSF1Q10570 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.32□□□□□ -2.36
CPSF1Q10570 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.32□□□□□ -2.36
CPSF1Q10570 AC009269.6-201ENST00000621778 588 ntBASIC0.32□□□□□ -2.36
CPSF1Q10570 FARSBP1-201ENST00000435808 1778 ntBASIC0.32□□□□□ -2.36
CPSF1Q10570 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.32□□□□□ -2.36
CPSF1Q10570 RNU6-110P-201ENST00000384508 104 ntBASIC0.31□□□□□ -2.36
CPSF1Q10570 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.31□□□□□ -2.36
CPSF1Q10570 RPL21P111-201ENST00000418453 477 ntBASIC0.31□□□□□ -2.36
CPSF1Q10570 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.31□□□□□ -2.36
CPSF1Q10570 AL591704.1-201ENST00000432574 275 ntBASIC0.31□□□□□ -2.36
CPSF1Q10570 RPL36AP53-201ENST00000432891 316 ntBASIC0.31□□□□□ -2.36
CPSF1Q10570 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.31□□□□□ -2.36
CPSF1Q10570 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC0.31□□□□□ -2.36
CPSF1Q10570 RNA5SP503-201ENST00000517047 117 ntBASIC0.31□□□□□ -2.36
CPSF1Q10570 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.31□□□□□ -2.36
CPSF1Q10570 EIF4A1P12-201ENST00000551910 141 ntBASIC0.31□□□□□ -2.36
CPSF1Q10570 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.31□□□□□ -2.36
CPSF1Q10570 AC040896.1-201ENST00000613819 479 ntBASIC0.31□□□□□ -2.36
CPSF1Q10570 AC006213.5-201ENST00000619673 288 ntBASIC0.31□□□□□ -2.36
CPSF1Q10570 RNU6-1078P-201ENST00000364522 103 ntBASIC0.3□□□□□ -2.36
CPSF1Q10570 RNU6-40P-201ENST00000384254 107 ntBASIC0.3□□□□□ -2.36
CPSF1Q10570 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.3□□□□□ -2.36
CPSF1Q10570 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.3□□□□□ -2.36
CPSF1Q10570 AC002542.1-201ENST00000440683 193 ntBASIC0.3□□□□□ -2.36
CPSF1Q10570 HAR1A.1-201ENST00000459583 118 ntBASIC0.3□□□□□ -2.36
CPSF1Q10570 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.3□□□□□ -2.36
CPSF1Q10570 MTND5P13-201ENST00000513046 1079 ntBASIC0.3□□□□□ -2.36
CPSF1Q10570 SNORA3.4-201ENST00000515969 96 ntBASIC0.3□□□□□ -2.36
CPSF1Q10570 RNU6-965P-201ENST00000516721 96 ntBASIC0.3□□□□□ -2.36
CPSF1Q10570 RNA5SP337-201ENST00000517007 109 ntBASIC0.3□□□□□ -2.36
CPSF1Q10570 MIR5094-201ENST00000578766 85 ntBASIC0.3□□□□□ -2.36
CPSF1Q10570 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.3□□□□□ -2.36
CPSF1Q10570 AC022432.1-201ENST00000595739 310 ntBASIC0.3□□□□□ -2.36
CPSF1Q10570 AC073410.2-201ENST00000603240 332 ntBASIC0.3□□□□□ -2.36
CPSF1Q10570 AC007792.1-201ENST00000623023 402 ntBASIC0.3□□□□□ -2.36
CPSF1Q10570 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
CPSF1Q10570 RNA5SP361-201ENST00000362686 118 ntBASIC0.3□□□□□ -2.36
CPSF1Q10570 SNORD114-6-201ENST00000364393 72 ntBASIC0.3□□□□□ -2.36
CPSF1Q10570 Y_RNA.294-201ENST00000364916 102 ntBASIC0.3□□□□□ -2.36
CPSF1Q10570 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.3□□□□□ -2.36
CPSF1Q10570 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC0.3□□□□□ -2.36
CPSF1Q10570 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CPSF1Q10570 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.3□□□□□ -2.36
CPSF1Q10570 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.3□□□□□ -2.36
CPSF1Q10570 AC130509.1-201ENST00000464158 433 ntBASIC0.3□□□□□ -2.36
CPSF1Q10570 AL590705.4-201ENST00000532209 134 ntBASIC0.3□□□□□ -2.36
CPSF1Q10570 AC018630.3-201ENST00000542637 96 ntBASIC0.3□□□□□ -2.36
CPSF1Q10570 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.3□□□□□ -2.36
CPSF1Q10570 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CPSF1Q10570 AL365434.2-201ENST00000607979 234 ntBASIC0.3□□□□□ -2.36
CPSF1Q10570 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CPSF1Q10570 AC019226.1-201ENST00000625666 515 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms