Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PCDH1Q08174 AC004825.2-201ENST00000616634 455 ntBASIC4.11□□□□□ -1.75
PCDH1Q08174 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDH1Q08174 BX322639.1-202ENST00000423987 2213 ntBASIC4.11□□□□□ -1.75
PCDH1Q08174 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDH1Q08174 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDH1Q08174 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.11□□□□□ -1.75
PCDH1Q08174 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PCDH1Q08174 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PCDH1Q08174 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PCDH1Q08174 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PCDH1Q08174 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDH1Q08174 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDH1Q08174 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
PCDH1Q08174 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDH1Q08174 SNORA31-201ENST00000362607 130 ntBASIC4.1□□□□□ -1.75
PCDH1Q08174 RNU1-14P-201ENST00000362759 152 ntBASIC4.1□□□□□ -1.75
PCDH1Q08174 SNORA72.2-201ENST00000365028 127 ntBASIC4.1□□□□□ -1.75
PCDH1Q08174 SNORD50.2-201ENST00000365465 70 ntBASIC4.1□□□□□ -1.75
PCDH1Q08174 RPL21P17-201ENST00000397467 475 ntBASIC4.1□□□□□ -1.75
PCDH1Q08174 RNU6-394P-201ENST00000410735 107 ntBASIC4.1□□□□□ -1.75
PCDH1Q08174 RPL23AP26-201ENST00000412728 464 ntBASIC4.1□□□□□ -1.75
PCDH1Q08174 AC012306.1-201ENST00000423267 114 ntBASIC4.1□□□□□ -1.75
PCDH1Q08174 AC009237.7-201ENST00000447357 229 ntBASIC4.1□□□□□ -1.75
PCDH1Q08174 HMGN2P10-201ENST00000448085 265 ntBASIC4.1□□□□□ -1.75
PCDH1Q08174 RPL26P9-201ENST00000457466 433 ntBASIC4.1□□□□□ -1.75
PCDH1Q08174 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.1□□□□□ -1.75
PCDH1Q08174 RPS29P20-201ENST00000489592 171 ntBASIC4.1□□□□□ -1.75
PCDH1Q08174 CYCSP23-201ENST00000519781 313 ntBASIC4.1□□□□□ -1.75
PCDH1Q08174 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.1□□□□□ -1.75
PCDH1Q08174 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PCDH1Q08174 MIR548AI-201ENST00000579940 88 ntBASIC4.1□□□□□ -1.75
PCDH1Q08174 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.1□□□□□ -1.75
PCDH1Q08174 AC005828.6-201ENST00000606610 232 ntBASIC4.1□□□□□ -1.75
PCDH1Q08174 AC104465.1-201ENST00000611365 139 ntBASIC4.1□□□□□ -1.75
PCDH1Q08174 MIR6758-201ENST00000620653 63 ntBASIC4.1□□□□□ -1.75
PCDH1Q08174 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDH1Q08174 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDH1Q08174 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDH1Q08174 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDH1Q08174 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PCDH1Q08174 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PCDH1Q08174 ZNF204P-201ENST00000416749 2397 ntBASIC4.1□□□□□ -1.75
PCDH1Q08174 LINC02471-203ENST00000641941 4752 ntBASIC4.1□□□□□ -1.75
PCDH1Q08174 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.1□□□□□ -1.75
PCDH1Q08174 MAPK10-253ENST00000641010 4072 ntBASIC4.1□□□□□ -1.75
PCDH1Q08174 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
PCDH1Q08174 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.09□□□□□ -1.75
PCDH1Q08174 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDH1Q08174 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PCDH1Q08174 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
PCDH1Q08174 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDH1Q08174 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
PCDH1Q08174 Y_RNA.8-201ENST00000362353 102 ntBASIC4.09□□□□□ -1.75
PCDH1Q08174 Y_RNA.217-201ENST00000364214 105 ntBASIC4.09□□□□□ -1.75
PCDH1Q08174 Y_RNA.304-201ENST00000365011 112 ntBASIC4.09□□□□□ -1.75
PCDH1Q08174 MIR3074-201ENST00000384885 81 ntBASIC4.09□□□□□ -1.75
PCDH1Q08174 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDH1Q08174 FTH1P6-201ENST00000430768 320 ntBASIC4.09□□□□□ -1.75
PCDH1Q08174 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDH1Q08174 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.09□□□□□ -1.75
PCDH1Q08174 RPL39P29-201ENST00000447779 157 ntBASIC4.09□□□□□ -1.75
PCDH1Q08174 RNA5SP246-201ENST00000458909 119 ntBASIC4.09□□□□□ -1.75
PCDH1Q08174 Y_RNA.641-201ENST00000459414 105 ntBASIC4.09□□□□□ -1.75
PCDH1Q08174 RPS23P7-201ENST00000466210 444 ntBASIC4.09□□□□□ -1.75
PCDH1Q08174 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.09□□□□□ -1.75
PCDH1Q08174 AC074133.1-201ENST00000515696 183 ntBASIC4.09□□□□□ -1.75
PCDH1Q08174 RNU6-1219P-201ENST00000516143 112 ntBASIC4.09□□□□□ -1.75
PCDH1Q08174 AC055872.1-201ENST00000570978 278 ntBASIC4.09□□□□□ -1.75
PCDH1Q08174 MIR4308-201ENST00000580634 81 ntBASIC4.09□□□□□ -1.75
PCDH1Q08174 AC073073.2-201ENST00000609827 2578 ntBASIC4.09□□□□□ -1.75
PCDH1Q08174 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDH1Q08174 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PCDH1Q08174 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
PCDH1Q08174 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
PCDH1Q08174 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.09□□□□□ -1.76
PCDH1Q08174 ADAM3A-203ENST00000461344 2157 ntBASIC4.09□□□□□ -1.76
PCDH1Q08174 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PCDH1Q08174 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDH1Q08174 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDH1Q08174 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
PCDH1Q08174 RNU6-1285P-201ENST00000363480 105 ntBASIC4.08□□□□□ -1.76
PCDH1Q08174 Y_RNA.262-201ENST00000364641 102 ntBASIC4.08□□□□□ -1.76
PCDH1Q08174 RNA5SP390-201ENST00000410191 113 ntBASIC4.08□□□□□ -1.76
PCDH1Q08174 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.08□□□□□ -1.76
PCDH1Q08174 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCDH1Q08174 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.08□□□□□ -1.76
PCDH1Q08174 RNU6-625P-201ENST00000459412 107 ntBASIC4.08□□□□□ -1.76
PCDH1Q08174 AC006517.1-201ENST00000480485 328 ntBASIC4.08□□□□□ -1.76
PCDH1Q08174 RPS26P15-201ENST00000488067 348 ntBASIC4.08□□□□□ -1.76
PCDH1Q08174 RNU5F-8P-201ENST00000515941 111 ntBASIC4.08□□□□□ -1.76
PCDH1Q08174 RNA5SP49-201ENST00000516450 115 ntBASIC4.08□□□□□ -1.76
PCDH1Q08174 RNU6-928P-201ENST00000516876 104 ntBASIC4.08□□□□□ -1.76
PCDH1Q08174 RN7SKP289-201ENST00000517244 295 ntBASIC4.08□□□□□ -1.76
PCDH1Q08174 IGLVIV-65-201ENST00000517313 360 ntBASIC4.08□□□□□ -1.76
PCDH1Q08174 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.08□□□□□ -1.76
PCDH1Q08174 MTND5P35-201ENST00000557537 1720 ntBASIC4.08□□□□□ -1.76
PCDH1Q08174 AC021739.1-201ENST00000559631 174 ntBASIC4.08□□□□□ -1.76
PCDH1Q08174 AC110491.1-201ENST00000562191 2010 ntBASIC4.08□□□□□ -1.76
PCDH1Q08174 MIR4277-201ENST00000578298 84 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms