Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 FTLP6-201ENST00000355274 422 ntBASIC2.02□□□□□ -2.09
CKAP4Q07065 RNA5SP289-201ENST00000362332 137 ntBASIC2.02□□□□□ -2.09
CKAP4Q07065 U3.12-201ENST00000364498 214 ntBASIC2.02□□□□□ -2.09
CKAP4Q07065 RNU1-73P-201ENST00000383971 164 ntBASIC2.02□□□□□ -2.09
CKAP4Q07065 RNU6-116P-201ENST00000384042 109 ntBASIC2.02□□□□□ -2.09
CKAP4Q07065 MIR301A-201ENST00000385261 86 ntBASIC2.02□□□□□ -2.09
CKAP4Q07065 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CKAP4Q07065 AL606923.1-201ENST00000406616 190 ntBASIC2.02□□□□□ -2.09
CKAP4Q07065 RNU6-373P-201ENST00000411247 98 ntBASIC2.02□□□□□ -2.09
CKAP4Q07065 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.02□□□□□ -2.09
CKAP4Q07065 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.02□□□□□ -2.09
CKAP4Q07065 GPM6BP2-201ENST00000432046 144 ntBASIC2.02□□□□□ -2.09
CKAP4Q07065 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.02□□□□□ -2.09
CKAP4Q07065 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.02□□□□□ -2.09
CKAP4Q07065 GPM6BP1-201ENST00000446387 144 ntBASIC2.02□□□□□ -2.09
CKAP4Q07065 MTATP6P7-201ENST00000453315 681 ntBASIC2.02□□□□□ -2.09
CKAP4Q07065 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.02□□□□□ -2.09
CKAP4Q07065 CECR9-201ENST00000453421 199 ntBASIC2.02□□□□□ -2.09
CKAP4Q07065 RPL37P6-201ENST00000460682 294 ntBASIC2.02□□□□□ -2.09
CKAP4Q07065 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.02□□□□□ -2.09
CKAP4Q07065 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.02□□□□□ -2.09
CKAP4Q07065 CCDC34P1-201ENST00000507441 517 ntBASIC2.02□□□□□ -2.09
CKAP4Q07065 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.02□□□□□ -2.09
CKAP4Q07065 LRRC34P2-201ENST00000514850 553 ntBASIC2.02□□□□□ -2.09
CKAP4Q07065 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.02□□□□□ -2.09
CKAP4Q07065 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.02□□□□□ -2.09
CKAP4Q07065 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.02□□□□□ -2.09
CKAP4Q07065 AC134698.4-201ENST00000523451 826 ntBASIC2.02□□□□□ -2.09
CKAP4Q07065 AF235103.2-201ENST00000525753 346 ntBASIC2.02□□□□□ -2.09
CKAP4Q07065 AL391261.3-201ENST00000557194 520 ntBASIC2.02□□□□□ -2.09
CKAP4Q07065 MIR3122-201ENST00000577243 73 ntBASIC2.02□□□□□ -2.09
CKAP4Q07065 AC024614.2-201ENST00000577584 372 ntBASIC2.02□□□□□ -2.09
CKAP4Q07065 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CKAP4Q07065 MIR1273C-201ENST00000578669 77 ntBASIC2.02□□□□□ -2.09
CKAP4Q07065 RNU6-89P-201ENST00000606519 100 ntBASIC2.02□□□□□ -2.09
CKAP4Q07065 FTX_3.1-201ENST00000610451 147 ntBASIC2.02□□□□□ -2.09
CKAP4Q07065 uc_338.34-201ENST00000617467 174 ntBASIC2.02□□□□□ -2.09
CKAP4Q07065 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.02□□□□□ -2.09
CKAP4Q07065 AC099654.14-201ENST00000638599 341 ntBASIC2.02□□□□□ -2.09
CKAP4Q07065 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CKAP4Q07065 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.02□□□□□ -2.09
CKAP4Q07065 MTND4P14-201ENST00000435799 1354 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 MTND4P27-201ENST00000450813 1354 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 AC010329.5-201ENST00000623497 2174 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 NACAP2-201ENST00000318548 624 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CKAP4Q07065 Y_RNA.167-201ENST00000363735 109 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 RNU6-82P-201ENST00000363970 107 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 Y_RNA.231-201ENST00000364358 102 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 RNU6-522P-201ENST00000364497 107 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 RNU6-715P-201ENST00000365204 103 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 Y_RNA.399-201ENST00000383955 105 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 RNU6-140P-201ENST00000384566 108 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CKAP4Q07065 RNU6-1328P-201ENST00000410938 106 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 RNA5SP111-201ENST00000411386 101 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.01□□□□□ -2.09
CKAP4Q07065 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.01□□□□□ -2.09
CKAP4Q07065 ZNF863P-201ENST00000426746 417 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.01□□□□□ -2.09
CKAP4Q07065 SNRPEP9-201ENST00000436794 238 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 MTATP6P23-201ENST00000440153 476 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 AL360271.2-201ENST00000447710 161 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.01□□□□□ -2.09
CKAP4Q07065 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.01□□□□□ -2.09
CKAP4Q07065 SCARNA18-201ENST00000459004 134 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 TRBV1-201ENST00000476502 284 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 RPS27P21-201ENST00000486977 252 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 MTCYBP18-201ENST00000501056 747 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 AC074344.1-201ENST00000512823 224 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 AC104136.1-201ENST00000512969 394 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.01□□□□□ -2.09
CKAP4Q07065 RNU6-143P-201ENST00000516942 93 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 AC009902.1-201ENST00000519351 183 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 AP005902.1-201ENST00000521358 186 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.01□□□□□ -2.09
CKAP4Q07065 AL118558.2-201ENST00000556294 238 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 AL157871.3-201ENST00000557231 293 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.01□□□□□ -2.09
CKAP4Q07065 MIR5583-1-201ENST00000580941 59 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 AC004805.2-201ENST00000605382 482 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 AC006504.8-201ENST00000621046 635 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 AL512643.1-201ENST00000635735 524 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 U2.21-201ENST00000637295 81 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CKAP4Q07065 KPNA2P1-201ENST00000458289 1591 ntBASIC2.01□□□□□ -2.09
CKAP4Q07065 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
CKAP4Q07065 AC004944.1-201ENST00000517807 3059 ntBASIC2□□□□□ -2.09
CKAP4Q07065 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2□□□□□ -2.09
CKAP4Q07065 Y_RNA.157-201ENST00000363638 102 ntBASIC2□□□□□ -2.09
CKAP4Q07065 SNORA16.1-201ENST00000364597 132 ntBASIC2□□□□□ -2.09
CKAP4Q07065 RNU4-66P-201ENST00000365199 138 ntBASIC2□□□□□ -2.09
CKAP4Q07065 XGY1-201ENST00000381172 446 ntBASIC2□□□□□ -2.09
CKAP4Q07065 SNORA75B-201ENST00000384053 137 ntBASIC2□□□□□ -2.09
CKAP4Q07065 RNY3P14-201ENST00000384309 102 ntBASIC2□□□□□ -2.09
CKAP4Q07065 MIR578-201ENST00000384828 96 ntBASIC2□□□□□ -2.09
CKAP4Q07065 SNORA16.2-201ENST00000390991 127 ntBASIC2□□□□□ -2.09
CKAP4Q07065 ARL5AP1-201ENST00000418991 388 ntBASIC2□□□□□ -2.09
CKAP4Q07065 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms