Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
HIST1H1AQ02539 RNU6-110P-201ENST00000384508 104 ntBASIC0.41□□□□□ -2.34
HIST1H1AQ02539 SNORD12-201ENST00000391002 90 ntBASIC0.41□□□□□ -2.34
HIST1H1AQ02539 UBE2V1P10-201ENST00000414685 269 ntBASIC0.41□□□□□ -2.34
HIST1H1AQ02539 MTCO2P25-201ENST00000447065 681 ntBASIC0.41□□□□□ -2.34
HIST1H1AQ02539 Y_RNA.638-201ENST00000459374 113 ntBASIC0.41□□□□□ -2.34
HIST1H1AQ02539 RPS29P1-201ENST00000465274 159 ntBASIC0.41□□□□□ -2.34
HIST1H1AQ02539 BET1P1-201ENST00000482276 359 ntBASIC0.41□□□□□ -2.34
HIST1H1AQ02539 ATP5EP1-201ENST00000510257 156 ntBASIC0.41□□□□□ -2.34
HIST1H1AQ02539 SNORA31.19-201ENST00000517079 126 ntBASIC0.41□□□□□ -2.34
HIST1H1AQ02539 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.41□□□□□ -2.34
HIST1H1AQ02539 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.41□□□□□ -2.34
HIST1H1AQ02539 AC023538.1-201ENST00000534576 736 ntBASIC0.41□□□□□ -2.34
HIST1H1AQ02539 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.41□□□□□ -2.34
HIST1H1AQ02539 ZNF971P-201ENST00000562068 1249 ntBASIC0.41□□□□□ -2.34
HIST1H1AQ02539 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.41□□□□□ -2.34
HIST1H1AQ02539 AC009229.3-201ENST00000608056 282 ntBASIC0.41□□□□□ -2.34
HIST1H1AQ02539 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.41□□□□□ -2.34
HIST1H1AQ02539 AC010615.1-201ENST00000594254 1764 ntBASIC0.4□□□□□ -2.35
HIST1H1AQ02539 SNORD114-22-201ENST00000365423 72 ntBASIC0.4□□□□□ -2.35
HIST1H1AQ02539 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.4□□□□□ -2.35
HIST1H1AQ02539 RNU6-622P-201ENST00000384272 103 ntBASIC0.4□□□□□ -2.35
HIST1H1AQ02539 MIR605-201ENST00000385078 83 ntBASIC0.4□□□□□ -2.35
HIST1H1AQ02539 AL359634.1-202ENST00000404721 284 ntBASIC0.4□□□□□ -2.35
HIST1H1AQ02539 RPS3AP1-201ENST00000413190 320 ntBASIC0.4□□□□□ -2.35
HIST1H1AQ02539 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.4□□□□□ -2.35
HIST1H1AQ02539 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.4□□□□□ -2.35
HIST1H1AQ02539 AC063976.4-201ENST00000421971 163 ntBASIC0.4□□□□□ -2.35
HIST1H1AQ02539 MTND2P20-201ENST00000440805 661 ntBASIC0.4□□□□□ -2.35
HIST1H1AQ02539 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.4□□□□□ -2.35
HIST1H1AQ02539 AL157398.1-201ENST00000452981 186 ntBASIC0.4□□□□□ -2.35
HIST1H1AQ02539 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.4□□□□□ -2.35
HIST1H1AQ02539 SNRPFP3-201ENST00000457792 225 ntBASIC0.4□□□□□ -2.35
HIST1H1AQ02539 SNORD124-201ENST00000459577 104 ntBASIC0.4□□□□□ -2.35
HIST1H1AQ02539 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
HIST1H1AQ02539 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.4□□□□□ -2.35
HIST1H1AQ02539 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.4□□□□□ -2.35
HIST1H1AQ02539 AC074344.1-201ENST00000512823 224 ntBASIC0.4□□□□□ -2.35
HIST1H1AQ02539 RNU6-143P-201ENST00000516942 93 ntBASIC0.4□□□□□ -2.35
HIST1H1AQ02539 OR6C7P-201ENST00000547875 934 ntBASIC0.4□□□□□ -2.35
HIST1H1AQ02539 CYP4A27P-201ENST00000567218 190 ntBASIC0.4□□□□□ -2.35
HIST1H1AQ02539 MIR3124-201ENST00000582636 67 ntBASIC0.4□□□□□ -2.35
HIST1H1AQ02539 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.4□□□□□ -2.35
HIST1H1AQ02539 AC005332.6-201ENST00000613178 446 ntBASIC0.4□□□□□ -2.35
HIST1H1AQ02539 RNA5SP432-201ENST00000362480 116 ntBASIC0.39□□□□□ -2.35
HIST1H1AQ02539 Y_RNA.40-201ENST00000362645 93 ntBASIC0.39□□□□□ -2.35
HIST1H1AQ02539 Y_RNA.191-201ENST00000363972 113 ntBASIC0.39□□□□□ -2.35
HIST1H1AQ02539 Y_RNA.332-201ENST00000365271 113 ntBASIC0.39□□□□□ -2.35
HIST1H1AQ02539 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.39□□□□□ -2.35
HIST1H1AQ02539 SNORA40C-201ENST00000391285 128 ntBASIC0.39□□□□□ -2.35
HIST1H1AQ02539 Y_RNA.597-201ENST00000410463 100 ntBASIC0.39□□□□□ -2.35
HIST1H1AQ02539 AC083875.1-201ENST00000419509 405 ntBASIC0.39□□□□□ -2.35
HIST1H1AQ02539 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.39□□□□□ -2.35
HIST1H1AQ02539 RAC1P6-201ENST00000423911 575 ntBASIC0.39□□□□□ -2.35
HIST1H1AQ02539 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.39□□□□□ -2.35
HIST1H1AQ02539 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.39□□□□□ -2.35
HIST1H1AQ02539 AL353752.1-201ENST00000454946 260 ntBASIC0.39□□□□□ -2.35
HIST1H1AQ02539 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.39□□□□□ -2.35
HIST1H1AQ02539 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.39□□□□□ -2.35
HIST1H1AQ02539 AC079140.3-201ENST00000511111 550 ntBASIC0.39□□□□□ -2.35
HIST1H1AQ02539 RNU4-54P-201ENST00000516428 129 ntBASIC0.39□□□□□ -2.35
HIST1H1AQ02539 RNA5SP168-201ENST00000516642 112 ntBASIC0.39□□□□□ -2.35
HIST1H1AQ02539 SUMO2P18-201ENST00000518873 252 ntBASIC0.39□□□□□ -2.35
HIST1H1AQ02539 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
HIST1H1AQ02539 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.39□□□□□ -2.35
HIST1H1AQ02539 ZKSCAN7P1-201ENST00000543668 673 ntBASIC0.39□□□□□ -2.35
HIST1H1AQ02539 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.39□□□□□ -2.35
HIST1H1AQ02539 MIR4714-201ENST00000580728 77 ntBASIC0.39□□□□□ -2.35
HIST1H1AQ02539 AL590229.1-201ENST00000603497 542 ntBASIC0.39□□□□□ -2.35
HIST1H1AQ02539 AC104465.1-201ENST00000611365 139 ntBASIC0.39□□□□□ -2.35
HIST1H1AQ02539 AC245060.5-201ENST00000610778 3293 ntBASIC0.39□□□□□ -2.35
HIST1H1AQ02539 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.38□□□□□ -2.35
HIST1H1AQ02539 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
HIST1H1AQ02539 AC068700.1-201ENST00000565862 3754 ntBASIC0.38□□□□□ -2.35
HIST1H1AQ02539 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
HIST1H1AQ02539 AL356776.1-201ENST00000406574 447 ntBASIC0.38□□□□□ -2.35
HIST1H1AQ02539 MIR1276-201ENST00000408707 83 ntBASIC0.38□□□□□ -2.35
HIST1H1AQ02539 DPRXP1-201ENST00000426312 460 ntBASIC0.38□□□□□ -2.35
HIST1H1AQ02539 RPS15AP10-201ENST00000432472 382 ntBASIC0.38□□□□□ -2.35
HIST1H1AQ02539 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.38□□□□□ -2.35
HIST1H1AQ02539 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.38□□□□□ -2.35
HIST1H1AQ02539 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.38□□□□□ -2.35
HIST1H1AQ02539 MRPL42P4-201ENST00000453267 443 ntBASIC0.38□□□□□ -2.35
HIST1H1AQ02539 AC108729.2-201ENST00000476543 840 ntBASIC0.38□□□□□ -2.35
HIST1H1AQ02539 FABP5P5-201ENST00000515537 406 ntBASIC0.38□□□□□ -2.35
HIST1H1AQ02539 SNORA31.4-201ENST00000516049 129 ntBASIC0.38□□□□□ -2.35
HIST1H1AQ02539 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.38□□□□□ -2.35
HIST1H1AQ02539 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.38□□□□□ -2.35
HIST1H1AQ02539 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.38□□□□□ -2.35
HIST1H1AQ02539 AC022432.1-201ENST00000595739 310 ntBASIC0.38□□□□□ -2.35
HIST1H1AQ02539 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.38□□□□□ -2.35
HIST1H1AQ02539 AL359740.1-201ENST00000624340 592 ntBASIC0.38□□□□□ -2.35
HIST1H1AQ02539 AC107982.1-201ENST00000507171 1300 ntBASIC0.38□□□□□ -2.35
HIST1H1AQ02539 RNA5SP361-201ENST00000362686 118 ntBASIC0.37□□□□□ -2.35
HIST1H1AQ02539 SNORA63D-201ENST00000364359 132 ntBASIC0.37□□□□□ -2.35
HIST1H1AQ02539 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.37□□□□□ -2.35
HIST1H1AQ02539 AC027644.1-201ENST00000419595 298 ntBASIC0.37□□□□□ -2.35
HIST1H1AQ02539 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.37□□□□□ -2.35
HIST1H1AQ02539 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.37□□□□□ -2.35
HIST1H1AQ02539 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms