Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 RPS27AP8-201ENST00000452665 445 ntBASIC0.82□□□□□ -2.28
CCL20P78556 RNU6-276P-201ENST00000516114 96 ntBASIC0.82□□□□□ -2.28
CCL20P78556 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.82□□□□□ -2.28
CCL20P78556 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.82□□□□□ -2.28
CCL20P78556 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.82□□□□□ -2.28
CCL20P78556 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC0.82□□□□□ -2.28
CCL20P78556 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.82□□□□□ -2.28
CCL20P78556 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.82□□□□□ -2.28
CCL20P78556 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC0.82□□□□□ -2.28
CCL20P78556 DEFB131E-202ENST00000602581 683 ntBASIC0.82□□□□□ -2.28
CCL20P78556 AL136363.2-201ENST00000604173 851 ntBASIC0.82□□□□□ -2.28
CCL20P78556 SNORD114-21-201ENST00000606412 72 ntBASIC0.82□□□□□ -2.28
CCL20P78556 AC095038.3-201ENST00000634439 195 ntBASIC0.82□□□□□ -2.28
CCL20P78556 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.82□□□□□ -2.28
CCL20P78556 MTND5P9-201ENST00000503854 1755 ntBASIC0.82□□□□□ -2.28
CCL20P78556 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC0.82□□□□□ -2.28
CCL20P78556 AC099786.3-201ENST00000565735 1410 ntBASIC0.81□□□□□ -2.28
CCL20P78556 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
CCL20P78556 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CCL20P78556 SNORD116.1-201ENST00000365628 92 ntBASIC0.81□□□□□ -2.28
CCL20P78556 MIR520A-201ENST00000384862 85 ntBASIC0.81□□□□□ -2.28
CCL20P78556 RNU6-360P-201ENST00000390944 104 ntBASIC0.81□□□□□ -2.28
CCL20P78556 PIGPP2-201ENST00000411569 458 ntBASIC0.81□□□□□ -2.28
CCL20P78556 EBAG9P1-201ENST00000418955 543 ntBASIC0.81□□□□□ -2.28
CCL20P78556 FTH1P12-201ENST00000432137 551 ntBASIC0.81□□□□□ -2.28
CCL20P78556 FTH1P25-201ENST00000447665 469 ntBASIC0.81□□□□□ -2.28
CCL20P78556 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC0.81□□□□□ -2.28
CCL20P78556 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.81□□□□□ -2.28
CCL20P78556 OR2AQ1P-201ENST00000451972 200 ntBASIC0.81□□□□□ -2.28
CCL20P78556 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.81□□□□□ -2.28
CCL20P78556 SNORA3.4-201ENST00000515969 96 ntBASIC0.81□□□□□ -2.28
CCL20P78556 RNU2-10P-201ENST00000516375 211 ntBASIC0.81□□□□□ -2.28
CCL20P78556 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.81□□□□□ -2.28
CCL20P78556 RAB11AP2-201ENST00000545905 639 ntBASIC0.81□□□□□ -2.28
CCL20P78556 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.81□□□□□ -2.28
CCL20P78556 MIR548AC-201ENST00000585049 88 ntBASIC0.81□□□□□ -2.28
CCL20P78556 BNIP3P31-201ENST00000604515 566 ntBASIC0.81□□□□□ -2.28
CCL20P78556 AC090578.1-201ENST00000604955 591 ntBASIC0.81□□□□□ -2.28
CCL20P78556 AL158032.1-201ENST00000605401 106 ntBASIC0.81□□□□□ -2.28
CCL20P78556 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
CCL20P78556 AC013412.1-201ENST00000610687 192 ntBASIC0.81□□□□□ -2.28
CCL20P78556 AL359547.2-201ENST00000615810 418 ntBASIC0.81□□□□□ -2.28
CCL20P78556 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
CCL20P78556 Y_RNA.46-201ENST00000362695 102 ntBASIC0.8□□□□□ -2.28
CCL20P78556 RNU6-433P-201ENST00000363216 104 ntBASIC0.8□□□□□ -2.28
CCL20P78556 RNU6-26P-201ENST00000383985 107 ntBASIC0.8□□□□□ -2.28
CCL20P78556 RNU6-1179P-201ENST00000384667 107 ntBASIC0.8□□□□□ -2.28
CCL20P78556 MIR548B-201ENST00000385247 97 ntBASIC0.8□□□□□ -2.28
CCL20P78556 C8orf59P1-201ENST00000429930 303 ntBASIC0.8□□□□□ -2.28
CCL20P78556 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.8□□□□□ -2.28
CCL20P78556 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC0.8□□□□□ -2.28
CCL20P78556 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.8□□□□□ -2.28
CCL20P78556 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.8□□□□□ -2.28
CCL20P78556 UBE2DNL-203ENST00000474922 222 ntBASIC0.8□□□□□ -2.28
CCL20P78556 RNU5F-2P-201ENST00000516066 82 ntBASIC0.8□□□□□ -2.28
CCL20P78556 SUMO2P18-201ENST00000518873 252 ntBASIC0.8□□□□□ -2.28
CCL20P78556 AC010376.1-201ENST00000522101 334 ntBASIC0.8□□□□□ -2.28
CCL20P78556 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC0.8□□□□□ -2.28
CCL20P78556 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.8□□□□□ -2.28
CCL20P78556 AC091544.4-201ENST00000555268 342 ntBASIC0.8□□□□□ -2.28
CCL20P78556 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.8□□□□□ -2.28
CCL20P78556 CYP3A52P-201ENST00000563326 91 ntBASIC0.8□□□□□ -2.28
CCL20P78556 OR4G3P-201ENST00000633500 913 ntBASIC0.8□□□□□ -2.28
CCL20P78556 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC0.8□□□□□ -2.28
CCL20P78556 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.8□□□□□ -2.28
CCL20P78556 Y_RNA.255-201ENST00000364581 97 ntBASIC0.79□□□□□ -2.28
CCL20P78556 RNU6-384P-201ENST00000364900 104 ntBASIC0.79□□□□□ -2.28
CCL20P78556 SNORA12-201ENST00000391162 147 ntBASIC0.79□□□□□ -2.28
CCL20P78556 RNU2-7P-201ENST00000410794 178 ntBASIC0.79□□□□□ -2.28
CCL20P78556 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.79□□□□□ -2.28
CCL20P78556 RPL23AP36-201ENST00000413895 458 ntBASIC0.79□□□□□ -2.28
CCL20P78556 RPL21P90-201ENST00000415692 466 ntBASIC0.79□□□□□ -2.28
CCL20P78556 AC123900.1-201ENST00000420390 96 ntBASIC0.79□□□□□ -2.28
CCL20P78556 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.79□□□□□ -2.28
CCL20P78556 EIF1P1-201ENST00000421436 341 ntBASIC0.79□□□□□ -2.28
CCL20P78556 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC0.79□□□□□ -2.28
CCL20P78556 AC006366.1-201ENST00000422002 759 ntBASIC0.79□□□□□ -2.28
CCL20P78556 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.79□□□□□ -2.28
CCL20P78556 CST2P1-201ENST00000425770 87 ntBASIC0.79□□□□□ -2.28
CCL20P78556 TOMM20P4-201ENST00000427861 435 ntBASIC0.79□□□□□ -2.28
CCL20P78556 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.79□□□□□ -2.28
CCL20P78556 EEF1A1P39-201ENST00000440791 250 ntBASIC0.79□□□□□ -2.28
CCL20P78556 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.79□□□□□ -2.28
CCL20P78556 MTCO3P9-201ENST00000506989 781 ntBASIC0.79□□□□□ -2.28
CCL20P78556 AC005741.1-201ENST00000511094 432 ntBASIC0.79□□□□□ -2.28
CCL20P78556 RNA5SP437-201ENST00000517249 129 ntBASIC0.79□□□□□ -2.28
CCL20P78556 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.79□□□□□ -2.28
CCL20P78556 AC092451.2-201ENST00000538746 658 ntBASIC0.79□□□□□ -2.28
CCL20P78556 AC123904.2-201ENST00000548059 300 ntBASIC0.79□□□□□ -2.28
CCL20P78556 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.79□□□□□ -2.28
CCL20P78556 MIR4303-201ENST00000581299 66 ntBASIC0.79□□□□□ -2.28
CCL20P78556 AC144521.1-201ENST00000607148 956 ntBASIC0.79□□□□□ -2.28
CCL20P78556 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CCL20P78556 SNORD32B-201ENST00000364460 84 ntBASIC0.78□□□□□ -2.28
CCL20P78556 RNY4P16-201ENST00000364768 94 ntBASIC0.78□□□□□ -2.28
CCL20P78556 SNORA70.7-201ENST00000384159 133 ntBASIC0.78□□□□□ -2.28
CCL20P78556 SNORA70B-201ENST00000384210 135 ntBASIC0.78□□□□□ -2.28
CCL20P78556 RNU6-1065P-201ENST00000384513 106 ntBASIC0.78□□□□□ -2.28
CCL20P78556 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.78□□□□□ -2.28
CCL20P78556 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms