Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
ABCA4P78363 MIR1912-201ENST00000410389 80 ntBASIC0.5□□□□□ -2.33
ABCA4P78363 RNU4-27P-201ENST00000410889 139 ntBASIC0.5□□□□□ -2.33
ABCA4P78363 AC008267.5-201ENST00000424928 265 ntBASIC0.5□□□□□ -2.33
ABCA4P78363 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.5□□□□□ -2.33
ABCA4P78363 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.5□□□□□ -2.33
ABCA4P78363 PTENP1-201ENST00000447117 1215 ntBASIC0.5□□□□□ -2.33
ABCA4P78363 AC132479.1-201ENST00000449160 144 ntBASIC0.5□□□□□ -2.33
ABCA4P78363 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.5□□□□□ -2.33
ABCA4P78363 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.5□□□□□ -2.33
ABCA4P78363 RNU6-1183P-201ENST00000517054 60 ntBASIC0.5□□□□□ -2.33
ABCA4P78363 RNA5SP404-201ENST00000517118 132 ntBASIC0.5□□□□□ -2.33
ABCA4P78363 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.5□□□□□ -2.33
ABCA4P78363 AC006518.2-201ENST00000542513 940 ntBASIC0.5□□□□□ -2.33
ABCA4P78363 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.5□□□□□ -2.33
ABCA4P78363 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.5□□□□□ -2.33
ABCA4P78363 MIR4653-201ENST00000585107 83 ntBASIC0.5□□□□□ -2.33
ABCA4P78363 BNIP3P31-201ENST00000604515 566 ntBASIC0.5□□□□□ -2.33
ABCA4P78363 AC013244.3-201ENST00000605614 388 ntBASIC0.5□□□□□ -2.33
ABCA4P78363 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
ABCA4P78363 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.5□□□□□ -2.33
ABCA4P78363 MIR302D-201ENST00000362275 68 ntBASIC0.5□□□□□ -2.33
ABCA4P78363 SNORA29-201ENST00000384183 140 ntBASIC0.5□□□□□ -2.33
ABCA4P78363 AL356776.1-201ENST00000406574 447 ntBASIC0.5□□□□□ -2.33
ABCA4P78363 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.5□□□□□ -2.33
ABCA4P78363 AC073614.1-201ENST00000438690 650 ntBASIC0.5□□□□□ -2.33
ABCA4P78363 MTATP6P30-201ENST00000443540 664 ntBASIC0.5□□□□□ -2.33
ABCA4P78363 HSPE1P13-201ENST00000451143 297 ntBASIC0.5□□□□□ -2.33
ABCA4P78363 AC092001.1-201ENST00000453012 261 ntBASIC0.5□□□□□ -2.33
ABCA4P78363 BTF3P15-201ENST00000455606 336 ntBASIC0.5□□□□□ -2.33
ABCA4P78363 HMGN2P9-201ENST00000476875 229 ntBASIC0.5□□□□□ -2.33
ABCA4P78363 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.5□□□□□ -2.33
ABCA4P78363 AC022861.1-201ENST00000522981 663 ntBASIC0.5□□□□□ -2.33
ABCA4P78363 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.5□□□□□ -2.33
ABCA4P78363 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.5□□□□□ -2.33
ABCA4P78363 RPL30P11-203ENST00000598995 310 ntBASIC0.5□□□□□ -2.33
ABCA4P78363 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.5□□□□□ -2.33
ABCA4P78363 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.5□□□□□ -2.33
ABCA4P78363 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.49□□□□□ -2.33
ABCA4P78363 RNU6-1010P-201ENST00000362757 107 ntBASIC0.49□□□□□ -2.33
ABCA4P78363 RNU6-72P-201ENST00000384285 79 ntBASIC0.49□□□□□ -2.33
ABCA4P78363 RNU6-114P-201ENST00000384704 105 ntBASIC0.49□□□□□ -2.33
ABCA4P78363 MIR217-201ENST00000384817 110 ntBASIC0.49□□□□□ -2.33
ABCA4P78363 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.49□□□□□ -2.33
ABCA4P78363 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.49□□□□□ -2.33
ABCA4P78363 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.49□□□□□ -2.33
ABCA4P78363 AL135790.2-201ENST00000437701 267 ntBASIC0.49□□□□□ -2.33
ABCA4P78363 RPL37P6-201ENST00000460682 294 ntBASIC0.49□□□□□ -2.33
ABCA4P78363 MTND1P16-201ENST00000465177 898 ntBASIC0.49□□□□□ -2.33
ABCA4P78363 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.49□□□□□ -2.33
ABCA4P78363 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.49□□□□□ -2.33
ABCA4P78363 MIR4789-201ENST00000577469 82 ntBASIC0.49□□□□□ -2.33
ABCA4P78363 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC0.49□□□□□ -2.33
ABCA4P78363 KATNBL1P5-201ENST00000605015 517 ntBASIC0.49□□□□□ -2.33
ABCA4P78363 AC009033.1-201ENST00000624279 431 ntBASIC0.49□□□□□ -2.33
ABCA4P78363 Z69720.2-201ENST00000624755 279 ntBASIC0.49□□□□□ -2.33
ABCA4P78363 ELL2P3-201ENST00000457883 1602 ntBASIC0.49□□□□□ -2.33
ABCA4P78363 SNORA63.3-201ENST00000362682 132 ntBASIC0.49□□□□□ -2.33
ABCA4P78363 Y_RNA.48-201ENST00000362710 103 ntBASIC0.49□□□□□ -2.33
ABCA4P78363 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.49□□□□□ -2.33
ABCA4P78363 MTCO1P56-201ENST00000401674 224 ntBASIC0.49□□□□□ -2.33
ABCA4P78363 AL357139.1-201ENST00000407792 426 ntBASIC0.49□□□□□ -2.33
ABCA4P78363 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.49□□□□□ -2.33
ABCA4P78363 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.49□□□□□ -2.33
ABCA4P78363 RPS20P10-201ENST00000451209 253 ntBASIC0.49□□□□□ -2.33
ABCA4P78363 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.49□□□□□ -2.33
ABCA4P78363 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.49□□□□□ -2.33
ABCA4P78363 AC018630.3-201ENST00000542637 96 ntBASIC0.49□□□□□ -2.33
ABCA4P78363 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.49□□□□□ -2.33
ABCA4P78363 AC090330.1-201ENST00000588646 764 ntBASIC0.49□□□□□ -2.33
ABCA4P78363 VN1R83P-201ENST00000595685 445 ntBASIC0.49□□□□□ -2.33
ABCA4P78363 AL365434.2-201ENST00000607979 234 ntBASIC0.49□□□□□ -2.33
ABCA4P78363 uc_338.22-201ENST00000622722 187 ntBASIC0.49□□□□□ -2.33
ABCA4P78363 AC132825.7-201ENST00000638744 335 ntBASIC0.49□□□□□ -2.33
ABCA4P78363 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.49□□□□□ -2.33
ABCA4P78363 RNU6-944P-201ENST00000364023 107 ntBASIC0.48□□□□□ -2.33
ABCA4P78363 RNU6-658P-201ENST00000384606 106 ntBASIC0.48□□□□□ -2.33
ABCA4P78363 RAC1P6-201ENST00000423911 575 ntBASIC0.48□□□□□ -2.33
ABCA4P78363 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.48□□□□□ -2.33
ABCA4P78363 AC010153.1-201ENST00000432862 727 ntBASIC0.48□□□□□ -2.33
ABCA4P78363 TRBVB-201ENST00000477100 408 ntBASIC0.48□□□□□ -2.33
ABCA4P78363 AL133373.1-201ENST00000497098 94 ntBASIC0.48□□□□□ -2.33
ABCA4P78363 MTND5P13-201ENST00000513046 1079 ntBASIC0.48□□□□□ -2.33
ABCA4P78363 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.48□□□□□ -2.33
ABCA4P78363 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.48□□□□□ -2.33
ABCA4P78363 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.48□□□□□ -2.33
ABCA4P78363 MZT1P2-201ENST00000604387 248 ntBASIC0.48□□□□□ -2.33
ABCA4P78363 OR4G3P-201ENST00000633500 913 ntBASIC0.48□□□□□ -2.33
ABCA4P78363 AC100821.1-201ENST00000523153 2479 ntBASIC0.48□□□□□ -2.33
ABCA4P78363 MIR29B2-201ENST00000385055 81 ntBASIC0.48□□□□□ -2.33
ABCA4P78363 RNU6-360P-201ENST00000390944 104 ntBASIC0.48□□□□□ -2.33
ABCA4P78363 EIF1P1-201ENST00000421436 341 ntBASIC0.48□□□□□ -2.33
ABCA4P78363 DPRXP1-201ENST00000426312 460 ntBASIC0.48□□□□□ -2.33
ABCA4P78363 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.48□□□□□ -2.33
ABCA4P78363 UBE2V1P8-201ENST00000437166 265 ntBASIC0.48□□□□□ -2.33
ABCA4P78363 FABP5P15-201ENST00000453566 214 ntBASIC0.48□□□□□ -2.33
ABCA4P78363 MTCO2P15-201ENST00000532655 656 ntBASIC0.48□□□□□ -2.33
ABCA4P78363 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.48□□□□□ -2.33
ABCA4P78363 BNIP3P16-201ENST00000589779 534 ntBASIC0.48□□□□□ -2.33
ABCA4P78363 AC034229.4-201ENST00000607861 441 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms