Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AL356057.1-201ENST00000533798 831 ntBASIC0.19□□□□□ -2.38
UBA52P62987 MRPS36P5-201ENST00000551909 298 ntBASIC0.19□□□□□ -2.38
UBA52P62987 NIFKP8-201ENST00000560500 874 ntBASIC0.19□□□□□ -2.38
UBA52P62987 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.19□□□□□ -2.38
UBA52P62987 AL139344.1-201ENST00000605228 195 ntBASIC0.19□□□□□ -2.38
UBA52P62987 AC034229.4-201ENST00000607861 441 ntBASIC0.19□□□□□ -2.38
UBA52P62987 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
UBA52P62987 AC009269.6-201ENST00000621778 588 ntBASIC0.19□□□□□ -2.38
UBA52P62987 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.19□□□□□ -2.38
UBA52P62987 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
UBA52P62987 RNU6-945P-201ENST00000383947 107 ntBASIC0.18□□□□□ -2.38
UBA52P62987 RNU6-348P-201ENST00000384386 107 ntBASIC0.18□□□□□ -2.38
UBA52P62987 RNU2-7P-201ENST00000410794 178 ntBASIC0.18□□□□□ -2.38
UBA52P62987 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.18□□□□□ -2.38
UBA52P62987 OR6C5P-201ENST00000452388 923 ntBASIC0.18□□□□□ -2.38
UBA52P62987 AC116655.1-201ENST00000508324 901 ntBASIC0.18□□□□□ -2.38
UBA52P62987 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.18□□□□□ -2.38
UBA52P62987 AP001893.2-201ENST00000526949 202 ntBASIC0.18□□□□□ -2.38
UBA52P62987 AP003327.1-201ENST00000529684 127 ntBASIC0.18□□□□□ -2.38
UBA52P62987 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.18□□□□□ -2.38
UBA52P62987 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.18□□□□□ -2.38
UBA52P62987 AC091057.3-201ENST00000602684 733 ntBASIC0.18□□□□□ -2.38
UBA52P62987 AC009237.15-201ENST00000610252 501 ntBASIC0.18□□□□□ -2.38
UBA52P62987 AC010133.1-201ENST00000615809 842 ntBASIC0.18□□□□□ -2.38
UBA52P62987 MIR6718-201ENST00000616153 80 ntBASIC0.18□□□□□ -2.38
UBA52P62987 AC023934.1-201ENST00000574529 2389 ntBASIC0.17□□□□□ -2.38
UBA52P62987 AL391994.1-201ENST00000254724 282 ntBASIC0.17□□□□□ -2.38
UBA52P62987 RNU6-160P-201ENST00000384591 107 ntBASIC0.17□□□□□ -2.38
UBA52P62987 MIR16-1-201ENST00000385271 89 ntBASIC0.17□□□□□ -2.38
UBA52P62987 RNU1-119P-201ENST00000391122 165 ntBASIC0.17□□□□□ -2.38
UBA52P62987 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.17□□□□□ -2.38
UBA52P62987 AC063976.4-201ENST00000421971 163 ntBASIC0.17□□□□□ -2.38
UBA52P62987 AC002429.1-201ENST00000437672 148 ntBASIC0.17□□□□□ -2.38
UBA52P62987 MTCO2P25-201ENST00000447065 681 ntBASIC0.17□□□□□ -2.38
UBA52P62987 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.17□□□□□ -2.38
UBA52P62987 RNA5SP395-201ENST00000516567 118 ntBASIC0.17□□□□□ -2.38
UBA52P62987 RNU6-965P-201ENST00000516721 96 ntBASIC0.17□□□□□ -2.38
UBA52P62987 RNU6-1183P-201ENST00000517054 60 ntBASIC0.17□□□□□ -2.38
UBA52P62987 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC0.17□□□□□ -2.38
UBA52P62987 AL590705.4-201ENST00000532209 134 ntBASIC0.17□□□□□ -2.38
UBA52P62987 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.17□□□□□ -2.38
UBA52P62987 MIR5094-201ENST00000578766 85 ntBASIC0.17□□□□□ -2.38
UBA52P62987 AC010620.1-201ENST00000601088 1102 ntBASIC0.17□□□□□ -2.38
UBA52P62987 AC093913.1-201ENST00000614178 329 ntBASIC0.17□□□□□ -2.38
UBA52P62987 AC018926.1-201ENST00000616335 435 ntBASIC0.17□□□□□ -2.38
UBA52P62987 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.17□□□□□ -2.38
UBA52P62987 AC002550.2-201ENST00000621246 394 ntBASIC0.17□□□□□ -2.38
UBA52P62987 AC093648.1-201ENST00000623546 606 ntBASIC0.17□□□□□ -2.38
UBA52P62987 SGO1P1-201ENST00000603525 1447 ntBASIC0.16□□□□□ -2.38
UBA52P62987 RNU6-418P-201ENST00000384035 107 ntBASIC0.16□□□□□ -2.38
UBA52P62987 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
UBA52P62987 SNORD12-201ENST00000391002 90 ntBASIC0.16□□□□□ -2.38
UBA52P62987 DHFRP6-201ENST00000401776 268 ntBASIC0.16□□□□□ -2.38
UBA52P62987 RPL21P111-201ENST00000418453 477 ntBASIC0.16□□□□□ -2.38
UBA52P62987 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.16□□□□□ -2.38
UBA52P62987 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.16□□□□□ -2.38
UBA52P62987 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.16□□□□□ -2.38
UBA52P62987 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.16□□□□□ -2.38
UBA52P62987 FABP5P15-201ENST00000453566 214 ntBASIC0.16□□□□□ -2.38
UBA52P62987 RNU2-53P-201ENST00000516257 147 ntBASIC0.16□□□□□ -2.38
UBA52P62987 RNA5SP255-201ENST00000516370 107 ntBASIC0.16□□□□□ -2.38
UBA52P62987 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.16□□□□□ -2.38
UBA52P62987 AC025423.5-201ENST00000550230 219 ntBASIC0.16□□□□□ -2.38
UBA52P62987 AL121579.1-201ENST00000555129 305 ntBASIC0.16□□□□□ -2.38
UBA52P62987 AL353765.1-201ENST00000605514 183 ntBASIC0.16□□□□□ -2.38
UBA52P62987 AL133445.2-201ENST00000611191 527 ntBASIC0.16□□□□□ -2.38
UBA52P62987 uc_338.15-201ENST00000615470 191 ntBASIC0.16□□□□□ -2.38
UBA52P62987 AL596245.1-201ENST00000618994 362 ntBASIC0.16□□□□□ -2.38
UBA52P62987 AL158163.2-201ENST00000619110 700 ntBASIC0.16□□□□□ -2.38
UBA52P62987 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
UBA52P62987 RNU4-12P-201ENST00000365233 139 ntBASIC0.15□□□□□ -2.39
UBA52P62987 Y_RNA.476-201ENST00000384347 108 ntBASIC0.15□□□□□ -2.39
UBA52P62987 RNA5SP299-201ENST00000391203 116 ntBASIC0.15□□□□□ -2.39
UBA52P62987 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.15□□□□□ -2.39
UBA52P62987 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.15□□□□□ -2.39
UBA52P62987 AC104651.1-201ENST00000427559 735 ntBASIC0.15□□□□□ -2.39
UBA52P62987 MTND3P4-201ENST00000453537 303 ntBASIC0.15□□□□□ -2.39
UBA52P62987 AC010631.1-201ENST00000474150 156 ntBASIC0.15□□□□□ -2.39
UBA52P62987 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.15□□□□□ -2.39
UBA52P62987 AC091435.1-201ENST00000505442 584 ntBASIC0.15□□□□□ -2.39
UBA52P62987 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.15□□□□□ -2.39
UBA52P62987 RNU6-927P-201ENST00000516199 100 ntBASIC0.15□□□□□ -2.39
UBA52P62987 RNA5SP285-201ENST00000516619 119 ntBASIC0.15□□□□□ -2.39
UBA52P62987 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.15□□□□□ -2.39
UBA52P62987 AC093012.1-202ENST00000549403 582 ntBASIC0.15□□□□□ -2.39
UBA52P62987 AC012065.4-201ENST00000602445 679 ntBASIC0.15□□□□□ -2.39
UBA52P62987 AL161798.1-201ENST00000604630 131 ntBASIC0.15□□□□□ -2.39
UBA52P62987 AC105148.1-201ENST00000604961 409 ntBASIC0.15□□□□□ -2.39
UBA52P62987 AC006213.5-201ENST00000619673 288 ntBASIC0.15□□□□□ -2.39
UBA52P62987 AC013470.4-201ENST00000619978 986 ntBASIC0.15□□□□□ -2.39
UBA52P62987 AC067863.3-201ENST00000624172 122 ntBASIC0.15□□□□□ -2.39
UBA52P62987 MIR1248-201ENST00000629190 106 ntBASIC0.15□□□□□ -2.39
UBA52P62987 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.15□□□□□ -2.39
UBA52P62987 RNU4-79P-201ENST00000362764 141 ntBASIC0.14□□□□□ -2.39
UBA52P62987 RNU6-743P-201ENST00000364151 106 ntBASIC0.14□□□□□ -2.39
UBA52P62987 MIR186-201ENST00000384988 86 ntBASIC0.14□□□□□ -2.39
UBA52P62987 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.14□□□□□ -2.39
UBA52P62987 MTCO2P12-201ENST00000427426 682 ntBASIC0.14□□□□□ -2.39
UBA52P62987 RPL31P35-201ENST00000431058 377 ntBASIC0.14□□□□□ -2.39
UBA52P62987 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms