Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 RN7SKP49-201ENST00000516675 260 ntBASIC0.34□□□□□ -2.36
RPS28P62857 SNORA70.24-201ENST00000517233 118 ntBASIC0.34□□□□□ -2.36
RPS28P62857 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.34□□□□□ -2.36
RPS28P62857 MTCO3P15-201ENST00000526563 574 ntBASIC0.34□□□□□ -2.36
RPS28P62857 BNIP3P6-201ENST00000549284 499 ntBASIC0.34□□□□□ -2.36
RPS28P62857 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.34□□□□□ -2.36
RPS28P62857 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC0.34□□□□□ -2.36
RPS28P62857 MIR1273C-201ENST00000578669 77 ntBASIC0.34□□□□□ -2.36
RPS28P62857 AC069545.1-201ENST00000605671 358 ntBASIC0.34□□□□□ -2.36
RPS28P62857 MIR8084-201ENST00000614105 89 ntBASIC0.34□□□□□ -2.36
RPS28P62857 AL159153.1-201ENST00000619688 317 ntBASIC0.34□□□□□ -2.36
RPS28P62857 AL159152.1-201ENST00000635019 2587 ntBASIC0.34□□□□□ -2.36
RPS28P62857 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
RPS28P62857 OR4G2P-201ENST00000328113 903 ntBASIC0.33□□□□□ -2.36
RPS28P62857 RNU4-51P-201ENST00000364206 140 ntBASIC0.33□□□□□ -2.36
RPS28P62857 SNORA4.3-201ENST00000365564 137 ntBASIC0.33□□□□□ -2.36
RPS28P62857 RNU6-945P-201ENST00000383947 107 ntBASIC0.33□□□□□ -2.36
RPS28P62857 MIR937-201ENST00000401271 86 ntBASIC0.33□□□□□ -2.36
RPS28P62857 RNU6ATAC34P-201ENST00000408879 121 ntBASIC0.33□□□□□ -2.36
RPS28P62857 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.33□□□□□ -2.36
RPS28P62857 MRPS36P1-201ENST00000421291 307 ntBASIC0.33□□□□□ -2.36
RPS28P62857 RAB28P5-201ENST00000427490 651 ntBASIC0.33□□□□□ -2.36
RPS28P62857 AL831737.1-201ENST00000441288 271 ntBASIC0.33□□□□□ -2.36
RPS28P62857 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC0.33□□□□□ -2.36
RPS28P62857 NDUFAF4P2-201ENST00000445374 520 ntBASIC0.33□□□□□ -2.36
RPS28P62857 SUMO2P5-201ENST00000506790 245 ntBASIC0.33□□□□□ -2.36
RPS28P62857 RNY4P37-201ENST00000516225 96 ntBASIC0.33□□□□□ -2.36
RPS28P62857 RNU6-914P-201ENST00000516749 109 ntBASIC0.33□□□□□ -2.36
RPS28P62857 MIR3683-201ENST00000580847 82 ntBASIC0.33□□□□□ -2.36
RPS28P62857 AC011494.1-201ENST00000596454 237 ntBASIC0.33□□□□□ -2.36
RPS28P62857 AC068620.3-201ENST00000602749 560 ntBASIC0.33□□□□□ -2.36
RPS28P62857 AC005229.3-201ENST00000603438 323 ntBASIC0.33□□□□□ -2.36
RPS28P62857 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC0.33□□□□□ -2.36
RPS28P62857 AC004777.1-201ENST00000624317 287 ntBASIC0.33□□□□□ -2.36
RPS28P62857 AC064859.1-201ENST00000624741 174 ntBASIC0.33□□□□□ -2.36
RPS28P62857 SCARNA4-202ENST00000625402 129 ntBASIC0.33□□□□□ -2.36
RPS28P62857 MIR340-201ENST00000362125 95 ntBASIC0.32□□□□□ -2.36
RPS28P62857 RNU6-1123P-201ENST00000362347 106 ntBASIC0.32□□□□□ -2.36
RPS28P62857 SNORA80A-201ENST00000363922 136 ntBASIC0.32□□□□□ -2.36
RPS28P62857 RNA5SP190-201ENST00000365222 118 ntBASIC0.32□□□□□ -2.36
RPS28P62857 RNU6-278P-201ENST00000390945 109 ntBASIC0.32□□□□□ -2.36
RPS28P62857 SNORA12-201ENST00000391162 147 ntBASIC0.32□□□□□ -2.36
RPS28P62857 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.32□□□□□ -2.36
RPS28P62857 Y_RNA.623-201ENST00000411128 95 ntBASIC0.32□□□□□ -2.36
RPS28P62857 AC073910.1-201ENST00000445047 438 ntBASIC0.32□□□□□ -2.36
RPS28P62857 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.32□□□□□ -2.36
RPS28P62857 AC121161.1-201ENST00000510606 652 ntBASIC0.32□□□□□ -2.36
RPS28P62857 RNA5SP255-201ENST00000516370 107 ntBASIC0.32□□□□□ -2.36
RPS28P62857 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.32□□□□□ -2.36
RPS28P62857 AC087897.1-201ENST00000550134 156 ntBASIC0.32□□□□□ -2.36
RPS28P62857 AL442163.3-201ENST00000554110 156 ntBASIC0.32□□□□□ -2.36
RPS28P62857 DNAJC19P9-201ENST00000555084 351 ntBASIC0.32□□□□□ -2.36
RPS28P62857 MIR1254-2-201ENST00000579553 63 ntBASIC0.32□□□□□ -2.36
RPS28P62857 MIR4648-201ENST00000580107 72 ntBASIC0.32□□□□□ -2.36
RPS28P62857 MIR4435-1-201ENST00000582552 80 ntBASIC0.32□□□□□ -2.36
RPS28P62857 AL645939.4-201ENST00000604495 135 ntBASIC0.32□□□□□ -2.36
RPS28P62857 RPL21P136-201ENST00000605378 396 ntBASIC0.32□□□□□ -2.36
RPS28P62857 AL353765.1-201ENST00000605514 183 ntBASIC0.32□□□□□ -2.36
RPS28P62857 MIR6078-201ENST00000611069 100 ntBASIC0.32□□□□□ -2.36
RPS28P62857 MTND5P42-201ENST00000637720 498 ntBASIC0.32□□□□□ -2.36
RPS28P62857 SNORD56.1-201ENST00000362913 68 ntBASIC0.31□□□□□ -2.36
RPS28P62857 SNORD18A-201ENST00000363753 72 ntBASIC0.31□□□□□ -2.36
RPS28P62857 SNORD32B-201ENST00000364460 84 ntBASIC0.31□□□□□ -2.36
RPS28P62857 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
RPS28P62857 MTCO2P1-201ENST00000424648 477 ntBASIC0.31□□□□□ -2.36
RPS28P62857 RPS27P1-201ENST00000450552 247 ntBASIC0.31□□□□□ -2.36
RPS28P62857 AC009474.2-201ENST00000451383 136 ntBASIC0.31□□□□□ -2.36
RPS28P62857 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.31□□□□□ -2.36
RPS28P62857 RPL39P38-201ENST00000467018 153 ntBASIC0.31□□□□□ -2.36
RPS28P62857 AC048334.1-201ENST00000477975 159 ntBASIC0.31□□□□□ -2.36
RPS28P62857 RNU6-677P-201ENST00000516914 101 ntBASIC0.31□□□□□ -2.36
RPS28P62857 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.31□□□□□ -2.36
RPS28P62857 MIR3162-201ENST00000581818 82 ntBASIC0.31□□□□□ -2.36
RPS28P62857 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.31□□□□□ -2.36
RPS28P62857 Z83818.1-201ENST00000603584 150 ntBASIC0.31□□□□□ -2.36
RPS28P62857 AL136363.2-201ENST00000604173 851 ntBASIC0.31□□□□□ -2.36
RPS28P62857 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC0.31□□□□□ -2.36
RPS28P62857 AC022893.3-201ENST00000607665 437 ntBASIC0.31□□□□□ -2.36
RPS28P62857 AC126177.8-201ENST00000618339 1015 ntBASIC0.31□□□□□ -2.36
RPS28P62857 IGHVIII-44-202ENST00000636235 289 ntBASIC0.31□□□□□ -2.36
RPS28P62857 SNORA71.3-201ENST00000362582 128 ntBASIC0.3□□□□□ -2.36
RPS28P62857 SNORA17.3-201ENST00000391159 129 ntBASIC0.3□□□□□ -2.36
RPS28P62857 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.3□□□□□ -2.36
RPS28P62857 RPS3AP37-201ENST00000419176 745 ntBASIC0.3□□□□□ -2.36
RPS28P62857 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.3□□□□□ -2.36
RPS28P62857 USP9YP14-201ENST00000430663 563 ntBASIC0.3□□□□□ -2.36
RPS28P62857 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.3□□□□□ -2.36
RPS28P62857 ART2BP-201ENST00000453501 499 ntBASIC0.3□□□□□ -2.36
RPS28P62857 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.3□□□□□ -2.36
RPS28P62857 AL122001.1-201ENST00000457027 370 ntBASIC0.3□□□□□ -2.36
RPS28P62857 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.3□□□□□ -2.36
RPS28P62857 TOMM22P6-201ENST00000465035 409 ntBASIC0.3□□□□□ -2.36
RPS28P62857 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.3□□□□□ -2.36
RPS28P62857 MTCO3P28-201ENST00000513351 515 ntBASIC0.3□□□□□ -2.36
RPS28P62857 SNORD79.1-201ENST00000516069 84 ntBASIC0.3□□□□□ -2.36
RPS28P62857 RNU6-295P-201ENST00000516901 104 ntBASIC0.3□□□□□ -2.36
RPS28P62857 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.3□□□□□ -2.36
RPS28P62857 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.3□□□□□ -2.36
RPS28P62857 DEFB131D-201ENST00000526803 184 ntBASIC0.3□□□□□ -2.36
RPS28P62857 AP001893.2-201ENST00000526949 202 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms