Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 CBX3P6-201ENST00000430257 527 ntBASIC1.14□□□□□ -2.23
ACTBP60709 RPL23AP30-201ENST00000432419 501 ntBASIC1.14□□□□□ -2.23
ACTBP60709 RPS15AP10-201ENST00000432472 382 ntBASIC1.14□□□□□ -2.23
ACTBP60709 MTND1P32-201ENST00000433043 938 ntBASIC1.14□□□□□ -2.23
ACTBP60709 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.14□□□□□ -2.23
ACTBP60709 USP9YP17-201ENST00000444617 696 ntBASIC1.14□□□□□ -2.23
ACTBP60709 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.14□□□□□ -2.23
ACTBP60709 RPL23AP35-201ENST00000451906 501 ntBASIC1.14□□□□□ -2.23
ACTBP60709 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.14□□□□□ -2.23
ACTBP60709 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.14□□□□□ -2.23
ACTBP60709 snoU109.2-201ENST00000459316 135 ntBASIC1.14□□□□□ -2.23
ACTBP60709 AL163540.1-201ENST00000485382 386 ntBASIC1.14□□□□□ -2.23
ACTBP60709 RNU6-965P-201ENST00000516721 96 ntBASIC1.14□□□□□ -2.23
ACTBP60709 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.14□□□□□ -2.23
ACTBP60709 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.14□□□□□ -2.23
ACTBP60709 AC005668.1-201ENST00000571142 476 ntBASIC1.14□□□□□ -2.23
ACTBP60709 MIR3169-201ENST00000578032 83 ntBASIC1.14□□□□□ -2.23
ACTBP60709 MIR4303-201ENST00000581299 66 ntBASIC1.14□□□□□ -2.23
ACTBP60709 AL512598.1-201ENST00000610158 273 ntBASIC1.14□□□□□ -2.23
ACTBP60709 AC021755.4-201ENST00000616620 456 ntBASIC1.14□□□□□ -2.23
ACTBP60709 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.14□□□□□ -2.23
ACTBP60709 MIR1248-201ENST00000629190 106 ntBASIC1.14□□□□□ -2.23
ACTBP60709 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.14□□□□□ -2.23
ACTBP60709 AL445523.1-201ENST00000451184 1362 ntBASIC1.13□□□□□ -2.23
ACTBP60709 OR4G2P-201ENST00000328113 903 ntBASIC1.13□□□□□ -2.23
ACTBP60709 RNU6-384P-201ENST00000364900 104 ntBASIC1.13□□□□□ -2.23
ACTBP60709 MIR10A-201ENST00000385043 110 ntBASIC1.13□□□□□ -2.23
ACTBP60709 RNU6-1242P-201ENST00000391052 103 ntBASIC1.13□□□□□ -2.23
ACTBP60709 MTCYBP5-201ENST00000423752 1135 ntBASIC1.13□□□□□ -2.23
ACTBP60709 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.13□□□□□ -2.23
ACTBP60709 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.13□□□□□ -2.23
ACTBP60709 AL031313.1-201ENST00000448435 256 ntBASIC1.13□□□□□ -2.23
ACTBP60709 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.13□□□□□ -2.23
ACTBP60709 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.13□□□□□ -2.23
ACTBP60709 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.13□□□□□ -2.23
ACTBP60709 RPL30P1-201ENST00000488676 339 ntBASIC1.13□□□□□ -2.23
ACTBP60709 Y_RNA.687-201ENST00000516558 91 ntBASIC1.13□□□□□ -2.23
ACTBP60709 SNORA43.2-201ENST00000516652 128 ntBASIC1.13□□□□□ -2.23
ACTBP60709 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.13□□□□□ -2.23
ACTBP60709 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.13□□□□□ -2.23
ACTBP60709 RAB11AP2-201ENST00000545905 639 ntBASIC1.13□□□□□ -2.23
ACTBP60709 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.13□□□□□ -2.23
ACTBP60709 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.13□□□□□ -2.23
ACTBP60709 AC068338.1-201ENST00000565567 176 ntBASIC1.13□□□□□ -2.23
ACTBP60709 SUB1P4-201ENST00000566062 339 ntBASIC1.13□□□□□ -2.23
ACTBP60709 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.13□□□□□ -2.23
ACTBP60709 AC018645.2-201ENST00000609151 472 ntBASIC1.13□□□□□ -2.23
ACTBP60709 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.13□□□□□ -2.23
ACTBP60709 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
ACTBP60709 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.13□□□□□ -2.23
ACTBP60709 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
ACTBP60709 MTND4P16-201ENST00000466108 1367 ntBASIC1.12□□□□□ -2.23
ACTBP60709 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
ACTBP60709 Y_RNA.97-201ENST00000363094 102 ntBASIC1.12□□□□□ -2.23
ACTBP60709 RNY4P16-201ENST00000364768 94 ntBASIC1.12□□□□□ -2.23
ACTBP60709 RNU6-439P-201ENST00000384188 106 ntBASIC1.12□□□□□ -2.23
ACTBP60709 MIR1267-201ENST00000408723 78 ntBASIC1.12□□□□□ -2.23
ACTBP60709 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.12□□□□□ -2.23
ACTBP60709 ZNF736P1Y-201ENST00000440402 1276 ntBASIC1.12□□□□□ -2.23
ACTBP60709 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.12□□□□□ -2.23
ACTBP60709 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.12□□□□□ -2.23
ACTBP60709 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.12□□□□□ -2.23
ACTBP60709 AC019288.1-201ENST00000557918 224 ntBASIC1.12□□□□□ -2.23
ACTBP60709 AC022022.2-201ENST00000602989 360 ntBASIC1.12□□□□□ -2.23
ACTBP60709 AL353778.1-201ENST00000603149 408 ntBASIC1.12□□□□□ -2.23
ACTBP60709 AP002360.4-201ENST00000606980 481 ntBASIC1.12□□□□□ -2.23
ACTBP60709 snoU13.31-201ENST00000607291 104 ntBASIC1.12□□□□□ -2.23
ACTBP60709 AL359547.2-201ENST00000615810 418 ntBASIC1.12□□□□□ -2.23
ACTBP60709 AC008993.2-201ENST00000631744 806 ntBASIC1.12□□□□□ -2.23
ACTBP60709 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.12□□□□□ -2.23
ACTBP60709 ZNF209P-201ENST00000593450 2304 ntBASIC1.11□□□□□ -2.23
ACTBP60709 snoU2_19.1-201ENST00000362361 80 ntBASIC1.11□□□□□ -2.23
ACTBP60709 RNU6-212P-201ENST00000362642 104 ntBASIC1.11□□□□□ -2.23
ACTBP60709 RNU6-1222P-201ENST00000384615 107 ntBASIC1.11□□□□□ -2.23
ACTBP60709 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.11□□□□□ -2.23
ACTBP60709 RNU4-62P-201ENST00000410125 130 ntBASIC1.11□□□□□ -2.23
ACTBP60709 BTF3L4P1-201ENST00000413813 468 ntBASIC1.11□□□□□ -2.23
ACTBP60709 AC006366.1-201ENST00000422002 759 ntBASIC1.11□□□□□ -2.23
ACTBP60709 MTND4P20-201ENST00000424125 869 ntBASIC1.11□□□□□ -2.23
ACTBP60709 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.11□□□□□ -2.23
ACTBP60709 AC009474.2-201ENST00000451383 136 ntBASIC1.11□□□□□ -2.23
ACTBP60709 RPS26P55-201ENST00000471178 356 ntBASIC1.11□□□□□ -2.23
ACTBP60709 RPL30P7-201ENST00000479312 323 ntBASIC1.11□□□□□ -2.23
ACTBP60709 AC010409.1-201ENST00000487382 476 ntBASIC1.11□□□□□ -2.23
ACTBP60709 HMGN1P13-201ENST00000505795 138 ntBASIC1.11□□□□□ -2.23
ACTBP60709 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.11□□□□□ -2.23
ACTBP60709 AC011979.2-201ENST00000527568 352 ntBASIC1.11□□□□□ -2.23
ACTBP60709 AC087441.2-201ENST00000529141 262 ntBASIC1.11□□□□□ -2.23
ACTBP60709 AL356057.1-201ENST00000533798 831 ntBASIC1.11□□□□□ -2.23
ACTBP60709 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.11□□□□□ -2.23
ACTBP60709 BNIP3P6-201ENST00000549284 499 ntBASIC1.11□□□□□ -2.23
ACTBP60709 AL161670.1-201ENST00000554348 137 ntBASIC1.11□□□□□ -2.23
ACTBP60709 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.11□□□□□ -2.23
ACTBP60709 MIR3118-1-201ENST00000581787 76 ntBASIC1.11□□□□□ -2.23
ACTBP60709 AL136363.2-201ENST00000604173 851 ntBASIC1.11□□□□□ -2.23
ACTBP60709 AC007792.1-201ENST00000623023 402 ntBASIC1.11□□□□□ -2.23
ACTBP60709 AC022513.1-201ENST00000624512 117 ntBASIC1.11□□□□□ -2.23
ACTBP60709 OR4G3P-201ENST00000633500 913 ntBASIC1.11□□□□□ -2.23
ACTBP60709 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
ACTBP60709 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms