Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 TAF9P2-201ENST00000454958 515 ntBASIC1.61□□□□□ -2.15
EIF3EP60228 AC006026.2-201ENST00000457376 180 ntBASIC1.61□□□□□ -2.15
EIF3EP60228 RAP1BP2-201ENST00000478270 544 ntBASIC1.61□□□□□ -2.15
EIF3EP60228 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.61□□□□□ -2.15
EIF3EP60228 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.61□□□□□ -2.15
EIF3EP60228 RNU6-685P-201ENST00000517088 95 ntBASIC1.61□□□□□ -2.15
EIF3EP60228 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.61□□□□□ -2.15
EIF3EP60228 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.61□□□□□ -2.15
EIF3EP60228 RMST_4.1-201ENST00000616886 107 ntBASIC1.61□□□□□ -2.15
EIF3EP60228 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
EIF3EP60228 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.6□□□□□ -2.15
EIF3EP60228 CBX3P1-201ENST00000325243 554 ntBASIC1.6□□□□□ -2.15
EIF3EP60228 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
EIF3EP60228 RNA5SP501-201ENST00000410990 112 ntBASIC1.6□□□□□ -2.15
EIF3EP60228 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.6□□□□□ -2.15
EIF3EP60228 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.6□□□□□ -2.15
EIF3EP60228 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.6□□□□□ -2.15
EIF3EP60228 AC116337.1-201ENST00000509680 687 ntBASIC1.6□□□□□ -2.15
EIF3EP60228 RNU6-1220P-201ENST00000517126 108 ntBASIC1.6□□□□□ -2.15
EIF3EP60228 AP005660.1-201ENST00000522972 293 ntBASIC1.6□□□□□ -2.15
EIF3EP60228 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.6□□□□□ -2.15
EIF3EP60228 RPL21P5-201ENST00000554662 472 ntBASIC1.6□□□□□ -2.15
EIF3EP60228 AL050303.3-201ENST00000613704 284 ntBASIC1.6□□□□□ -2.15
EIF3EP60228 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.6□□□□□ -2.15
EIF3EP60228 ZNF680P1-201ENST00000436625 1469 ntBASIC1.6□□□□□ -2.15
EIF3EP60228 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
EIF3EP60228 RNU6-212P-201ENST00000362642 104 ntBASIC1.59□□□□□ -2.15
EIF3EP60228 Y_RNA.99-201ENST00000363138 105 ntBASIC1.59□□□□□ -2.15
EIF3EP60228 RNU6-1164P-201ENST00000364428 107 ntBASIC1.59□□□□□ -2.15
EIF3EP60228 MIR597-201ENST00000384968 97 ntBASIC1.59□□□□□ -2.15
EIF3EP60228 BTF3L4P2-201ENST00000392798 346 ntBASIC1.59□□□□□ -2.15
EIF3EP60228 BTF3L4P1-201ENST00000413813 468 ntBASIC1.59□□□□□ -2.15
EIF3EP60228 RPL21P90-201ENST00000415692 466 ntBASIC1.59□□□□□ -2.15
EIF3EP60228 AC011233.1-201ENST00000422812 283 ntBASIC1.59□□□□□ -2.15
EIF3EP60228 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.59□□□□□ -2.15
EIF3EP60228 HMGB1P31-201ENST00000437242 427 ntBASIC1.59□□□□□ -2.15
EIF3EP60228 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.59□□□□□ -2.15
EIF3EP60228 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.59□□□□□ -2.15
EIF3EP60228 AC023790.1-201ENST00000482174 347 ntBASIC1.59□□□□□ -2.15
EIF3EP60228 MTCYBP40-201ENST00000509390 1135 ntBASIC1.59□□□□□ -2.15
EIF3EP60228 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.59□□□□□ -2.15
EIF3EP60228 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.59□□□□□ -2.15
EIF3EP60228 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.59□□□□□ -2.15
EIF3EP60228 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.59□□□□□ -2.15
EIF3EP60228 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.59□□□□□ -2.15
EIF3EP60228 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.59□□□□□ -2.15
EIF3EP60228 AC078795.2-201ENST00000602835 1252 ntBASIC1.59□□□□□ -2.15
EIF3EP60228 WISP1-OT1-201ENST00000602893 642 ntBASIC1.59□□□□□ -2.15
EIF3EP60228 AL022161.1-201ENST00000604390 213 ntBASIC1.59□□□□□ -2.15
EIF3EP60228 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.59□□□□□ -2.15
EIF3EP60228 AC016925.2-201ENST00000605108 242 ntBASIC1.59□□□□□ -2.15
EIF3EP60228 AL121992.2-201ENST00000606262 256 ntBASIC1.59□□□□□ -2.15
EIF3EP60228 BX248123.2-201ENST00000606318 124 ntBASIC1.59□□□□□ -2.15
EIF3EP60228 AC004908.3-201ENST00000610248 625 ntBASIC1.59□□□□□ -2.15
EIF3EP60228 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.59□□□□□ -2.15
EIF3EP60228 AC068787.1-201ENST00000623908 691 ntBASIC1.59□□□□□ -2.15
EIF3EP60228 AL359740.1-201ENST00000624340 592 ntBASIC1.59□□□□□ -2.15
EIF3EP60228 AC019226.2-201ENST00000625973 424 ntBASIC1.59□□□□□ -2.15
EIF3EP60228 AC002543.1-201ENST00000299783 1954 ntBASIC1.59□□□□□ -2.16
EIF3EP60228 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
EIF3EP60228 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
EIF3EP60228 RNU6-78P-201ENST00000362897 107 ntBASIC1.58□□□□□ -2.16
EIF3EP60228 SNORD56.1-201ENST00000362913 68 ntBASIC1.58□□□□□ -2.16
EIF3EP60228 SNORA26.9-201ENST00000391322 122 ntBASIC1.58□□□□□ -2.16
EIF3EP60228 RAP1BP3-201ENST00000407180 549 ntBASIC1.58□□□□□ -2.16
EIF3EP60228 RNU6-387P-201ENST00000411331 105 ntBASIC1.58□□□□□ -2.16
EIF3EP60228 CYCSP49-201ENST00000420810 319 ntBASIC1.58□□□□□ -2.16
EIF3EP60228 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.58□□□□□ -2.16
EIF3EP60228 AC000111.3-201ENST00000433478 193 ntBASIC1.58□□□□□ -2.16
EIF3EP60228 MTATP6P16-201ENST00000434543 526 ntBASIC1.58□□□□□ -2.16
EIF3EP60228 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.58□□□□□ -2.16
EIF3EP60228 AC007969.2-201ENST00000441891 191 ntBASIC1.58□□□□□ -2.16
EIF3EP60228 AC007677.1-201ENST00000445757 515 ntBASIC1.58□□□□□ -2.16
EIF3EP60228 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.58□□□□□ -2.16
EIF3EP60228 AL513124.1-201ENST00000450410 614 ntBASIC1.58□□□□□ -2.16
EIF3EP60228 HMGN2P23-201ENST00000456759 269 ntBASIC1.58□□□□□ -2.16
EIF3EP60228 snoU13.15-201ENST00000459407 104 ntBASIC1.58□□□□□ -2.16
EIF3EP60228 RPL30P1-201ENST00000488676 339 ntBASIC1.58□□□□□ -2.16
EIF3EP60228 AC005178.1-201ENST00000508392 440 ntBASIC1.58□□□□□ -2.16
EIF3EP60228 RNU6-1129P-201ENST00000515964 104 ntBASIC1.58□□□□□ -2.16
EIF3EP60228 SCARNA24.1-201ENST00000516465 137 ntBASIC1.58□□□□□ -2.16
EIF3EP60228 EEF1A1P37-201ENST00000522748 715 ntBASIC1.58□□□□□ -2.16
EIF3EP60228 AC009977.1-201ENST00000586015 570 ntBASIC1.58□□□□□ -2.16
EIF3EP60228 AC073539.2-201ENST00000597113 165 ntBASIC1.58□□□□□ -2.16
EIF3EP60228 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.58□□□□□ -2.16
EIF3EP60228 AC009159.2-201ENST00000617603 606 ntBASIC1.58□□□□□ -2.16
EIF3EP60228 AC007792.1-201ENST00000623023 402 ntBASIC1.58□□□□□ -2.16
EIF3EP60228 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.58□□□□□ -2.16
EIF3EP60228 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
EIF3EP60228 RNU6-661P-201ENST00000362409 107 ntBASIC1.57□□□□□ -2.16
EIF3EP60228 RNU6-169P-201ENST00000365336 107 ntBASIC1.57□□□□□ -2.16
EIF3EP60228 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.57□□□□□ -2.16
EIF3EP60228 RNU6-338P-201ENST00000383888 105 ntBASIC1.57□□□□□ -2.16
EIF3EP60228 RNU6-997P-201ENST00000384725 107 ntBASIC1.57□□□□□ -2.16
EIF3EP60228 MIR320A-201ENST00000385302 82 ntBASIC1.57□□□□□ -2.16
EIF3EP60228 MIR1304-201ENST00000408243 91 ntBASIC1.57□□□□□ -2.16
EIF3EP60228 RNU2-3P-201ENST00000410144 191 ntBASIC1.57□□□□□ -2.16
EIF3EP60228 RNA5SP111-201ENST00000411386 101 ntBASIC1.57□□□□□ -2.16
EIF3EP60228 HMGB1P18-201ENST00000438801 619 ntBASIC1.57□□□□□ -2.16
EIF3EP60228 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms