Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 Y_RNA.132-201ENST00000363421 102 ntBASIC2.77□□□□□ -1.97
CDH12P55289 RNU6-527P-201ENST00000363425 104 ntBASIC2.77□□□□□ -1.97
CDH12P55289 U8.8-201ENST00000365399 135 ntBASIC2.77□□□□□ -1.97
CDH12P55289 RNU6-933P-201ENST00000384424 107 ntBASIC2.77□□□□□ -1.97
CDH12P55289 RNU6-174P-201ENST00000410406 106 ntBASIC2.77□□□□□ -1.97
CDH12P55289 RN7SKP123-201ENST00000410732 291 ntBASIC2.77□□□□□ -1.97
CDH12P55289 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CDH12P55289 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.77□□□□□ -1.97
CDH12P55289 NIPA2P5-201ENST00000452282 464 ntBASIC2.77□□□□□ -1.97
CDH12P55289 AC006026.2-201ENST00000457376 180 ntBASIC2.77□□□□□ -1.97
CDH12P55289 RPS29P27-201ENST00000463711 170 ntBASIC2.77□□□□□ -1.97
CDH12P55289 RPL23AP49-201ENST00000492925 468 ntBASIC2.77□□□□□ -1.97
CDH12P55289 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.77□□□□□ -1.97
CDH12P55289 RNU6-1170P-201ENST00000515974 106 ntBASIC2.77□□□□□ -1.97
CDH12P55289 ACA59.2-201ENST00000517061 156 ntBASIC2.77□□□□□ -1.97
CDH12P55289 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CDH12P55289 AC109446.1-201ENST00000566172 220 ntBASIC2.77□□□□□ -1.97
CDH12P55289 AL080274.1-201ENST00000605565 220 ntBASIC2.77□□□□□ -1.97
CDH12P55289 AC092608.2-201ENST00000624427 218 ntBASIC2.77□□□□□ -1.97
CDH12P55289 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
CDH12P55289 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.77□□□□□ -1.97
CDH12P55289 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.77□□□□□ -1.97
CDH12P55289 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.76□□□□□ -1.97
CDH12P55289 Y_RNA.2-201ENST00000362330 96 ntBASIC2.76□□□□□ -1.97
CDH12P55289 Y_RNA.146-201ENST00000363549 102 ntBASIC2.76□□□□□ -1.97
CDH12P55289 RNA5SP267-201ENST00000364893 126 ntBASIC2.76□□□□□ -1.97
CDH12P55289 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.76□□□□□ -1.97
CDH12P55289 RNU6-596P-201ENST00000365395 98 ntBASIC2.76□□□□□ -1.97
CDH12P55289 RNU6-474P-201ENST00000384243 107 ntBASIC2.76□□□□□ -1.97
CDH12P55289 RNU6-692P-201ENST00000384496 107 ntBASIC2.76□□□□□ -1.97
CDH12P55289 MIR521-1-201ENST00000384902 87 ntBASIC2.76□□□□□ -1.97
CDH12P55289 MIR181B1-201ENST00000385240 110 ntBASIC2.76□□□□□ -1.97
CDH12P55289 U3.19-201ENST00000390893 196 ntBASIC2.76□□□□□ -1.97
CDH12P55289 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
CDH12P55289 MIR887-201ENST00000401258 79 ntBASIC2.76□□□□□ -1.97
CDH12P55289 RNA5SP120-201ENST00000410900 112 ntBASIC2.76□□□□□ -1.97
CDH12P55289 AL451074.5-201ENST00000415894 435 ntBASIC2.76□□□□□ -1.97
CDH12P55289 AC074117.2-201ENST00000417130 397 ntBASIC2.76□□□□□ -1.97
CDH12P55289 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH12P55289 USMG5P1-201ENST00000425964 177 ntBASIC2.76□□□□□ -1.97
CDH12P55289 RPL21P40-201ENST00000428586 483 ntBASIC2.76□□□□□ -1.97
CDH12P55289 MTND3P9-201ENST00000429526 346 ntBASIC2.76□□□□□ -1.97
CDH12P55289 AC005534.2-201ENST00000431047 433 ntBASIC2.76□□□□□ -1.97
CDH12P55289 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH12P55289 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH12P55289 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH12P55289 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH12P55289 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH12P55289 U8.21-201ENST00000459536 136 ntBASIC2.76□□□□□ -1.97
CDH12P55289 RPS29P2-201ENST00000479278 136 ntBASIC2.76□□□□□ -1.97
CDH12P55289 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.76□□□□□ -1.97
CDH12P55289 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.76□□□□□ -1.97
CDH12P55289 AC108043.1-201ENST00000512696 574 ntBASIC2.76□□□□□ -1.97
CDH12P55289 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.76□□□□□ -1.97
CDH12P55289 SCARNA16.2-201ENST00000516520 172 ntBASIC2.76□□□□□ -1.97
CDH12P55289 SNORA31.18-201ENST00000517043 134 ntBASIC2.76□□□□□ -1.97
CDH12P55289 AP005902.1-201ENST00000521358 186 ntBASIC2.76□□□□□ -1.97
CDH12P55289 AC009163.5-201ENST00000575421 637 ntBASIC2.76□□□□□ -1.97
CDH12P55289 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH12P55289 BNIP3P22-201ENST00000593399 556 ntBASIC2.76□□□□□ -1.97
CDH12P55289 AC091152.3-201ENST00000604227 325 ntBASIC2.76□□□□□ -1.97
CDH12P55289 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.76□□□□□ -1.97
CDH12P55289 AC241585.2-209ENST00000638217 143 ntBASIC2.76□□□□□ -1.97
CDH12P55289 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
CDH12P55289 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CDH12P55289 AL161431.1-201ENST00000618966 4205 ntBASIC2.76□□□□□ -1.97
CDH12P55289 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.76□□□□□ -1.97
CDH12P55289 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CDH12P55289 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CDH12P55289 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CDH12P55289 MTND5P10-201ENST00000603719 1809 ntBASIC2.75□□□□□ -1.97
CDH12P55289 SNORA71.3-201ENST00000362582 128 ntBASIC2.75□□□□□ -1.97
CDH12P55289 SNORD56.1-201ENST00000362913 68 ntBASIC2.75□□□□□ -1.97
CDH12P55289 SNORA75.6-201ENST00000391318 127 ntBASIC2.75□□□□□ -1.97
CDH12P55289 MIR1302-11-201ENST00000408051 138 ntBASIC2.75□□□□□ -1.97
CDH12P55289 MIR1302-9-201ENST00000408365 138 ntBASIC2.75□□□□□ -1.97
CDH12P55289 MIR1302-10-201ENST00000408734 138 ntBASIC2.75□□□□□ -1.97
CDH12P55289 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.75□□□□□ -1.97
CDH12P55289 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.75□□□□□ -1.97
CDH12P55289 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH12P55289 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH12P55289 AC243964.1-201ENST00000441814 261 ntBASIC2.75□□□□□ -1.97
CDH12P55289 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.75□□□□□ -1.97
CDH12P55289 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH12P55289 MIR2053-201ENST00000459295 91 ntBASIC2.75□□□□□ -1.97
CDH12P55289 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.75□□□□□ -1.97
CDH12P55289 RN7SL601P-201ENST00000471221 293 ntBASIC2.75□□□□□ -1.97
CDH12P55289 MED28P2-201ENST00000475771 317 ntBASIC2.75□□□□□ -1.97
CDH12P55289 FO393415.2-201ENST00000480085 343 ntBASIC2.75□□□□□ -1.97
CDH12P55289 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH12P55289 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH12P55289 RNU6-120P-201ENST00000516077 103 ntBASIC2.75□□□□□ -1.97
CDH12P55289 SNORD59.2-201ENST00000516873 68 ntBASIC2.75□□□□□ -1.97
CDH12P55289 SNORA31.23-201ENST00000517219 133 ntBASIC2.75□□□□□ -1.97
CDH12P55289 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.75□□□□□ -1.97
CDH12P55289 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH12P55289 AC010186.2-204ENST00000537668 439 ntBASIC2.75□□□□□ -1.97
CDH12P55289 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH12P55289 AC020661.2-201ENST00000560114 134 ntBASIC2.75□□□□□ -1.97
CDH12P55289 MTCO3P13-201ENST00000577757 781 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms