Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 Y_RNA.259-201ENST00000364619 101 ntBASIC3.22□□□□□ -1.89
COPAP53621 RNU6-827P-201ENST00000365553 106 ntBASIC3.22□□□□□ -1.89
COPAP53621 U3.26-201ENST00000391236 204 ntBASIC3.22□□□□□ -1.89
COPAP53621 FTH1P15-201ENST00000406984 280 ntBASIC3.22□□□□□ -1.89
COPAP53621 AL365496.1-201ENST00000426885 215 ntBASIC3.22□□□□□ -1.89
COPAP53621 AC009969.1-201ENST00000438726 172 ntBASIC3.22□□□□□ -1.89
COPAP53621 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.22□□□□□ -1.89
COPAP53621 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.22□□□□□ -1.89
COPAP53621 RN7SL75P-201ENST00000461926 281 ntBASIC3.22□□□□□ -1.89
COPAP53621 MRPL42P6-201ENST00000486397 371 ntBASIC3.22□□□□□ -1.89
COPAP53621 SEM1P1-201ENST00000506694 209 ntBASIC3.22□□□□□ -1.89
COPAP53621 AC116337.1-201ENST00000509680 687 ntBASIC3.22□□□□□ -1.89
COPAP53621 AC008885.1-201ENST00000514930 301 ntBASIC3.22□□□□□ -1.89
COPAP53621 RNA5SP385-201ENST00000515947 110 ntBASIC3.22□□□□□ -1.89
COPAP53621 SNORA43.2-201ENST00000516652 128 ntBASIC3.22□□□□□ -1.89
COPAP53621 RNU6-1016P-201ENST00000516689 94 ntBASIC3.22□□□□□ -1.89
COPAP53621 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.22□□□□□ -1.89
COPAP53621 UBL5P2-201ENST00000583788 219 ntBASIC3.22□□□□□ -1.89
COPAP53621 AC024153.1-201ENST00000603103 365 ntBASIC3.22□□□□□ -1.89
COPAP53621 AL355877.2-201ENST00000603670 358 ntBASIC3.22□□□□□ -1.89
COPAP53621 AL160413.1-201ENST00000622780 310 ntBASIC3.22□□□□□ -1.89
COPAP53621 AL359757.2-201ENST00000624309 274 ntBASIC3.22□□□□□ -1.89
COPAP53621 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
COPAP53621 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
COPAP53621 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
COPAP53621 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
COPAP53621 AC093831.2-201ENST00000624393 3427 ntBASIC3.21□□□□□ -1.9
COPAP53621 AL355596.1-201ENST00000565399 3996 ntBASIC3.21□□□□□ -1.9
COPAP53621 AC008264.2-201ENST00000610193 3731 ntBASIC3.21□□□□□ -1.9
COPAP53621 RNU6-942P-201ENST00000363002 107 ntBASIC3.21□□□□□ -1.9
COPAP53621 RNU6-527P-201ENST00000363425 104 ntBASIC3.21□□□□□ -1.9
COPAP53621 RNU6-1180P-201ENST00000364935 107 ntBASIC3.21□□□□□ -1.9
COPAP53621 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.21□□□□□ -1.9
COPAP53621 SNORA44-201ENST00000384584 132 ntBASIC3.21□□□□□ -1.9
COPAP53621 RNU6-1011P-201ENST00000384668 107 ntBASIC3.21□□□□□ -1.9
COPAP53621 RPL21P75-201ENST00000396599 483 ntBASIC3.21□□□□□ -1.9
COPAP53621 RPL21P28-201ENST00000401418 483 ntBASIC3.21□□□□□ -1.9
COPAP53621 AL138885.1-201ENST00000405921 675 ntBASIC3.21□□□□□ -1.9
COPAP53621 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.21□□□□□ -1.9
COPAP53621 RNU2-25P-201ENST00000411041 191 ntBASIC3.21□□□□□ -1.9
COPAP53621 AC245054.2-201ENST00000415639 319 ntBASIC3.21□□□□□ -1.9
COPAP53621 RPS15AP10-201ENST00000432472 382 ntBASIC3.21□□□□□ -1.9
COPAP53621 AC012308.1-201ENST00000451232 178 ntBASIC3.21□□□□□ -1.9
COPAP53621 UQCRHP3-201ENST00000451503 251 ntBASIC3.21□□□□□ -1.9
COPAP53621 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.21□□□□□ -1.9
COPAP53621 RPL21P39-201ENST00000463605 483 ntBASIC3.21□□□□□ -1.9
COPAP53621 AC087190.1-201ENST00000484462 480 ntBASIC3.21□□□□□ -1.9
COPAP53621 AC093591.1-201ENST00000491435 481 ntBASIC3.21□□□□□ -1.9
COPAP53621 AC018437.1-201ENST00000492214 406 ntBASIC3.21□□□□□ -1.9
COPAP53621 RPS27P26-201ENST00000494583 239 ntBASIC3.21□□□□□ -1.9
COPAP53621 RPL21P16-201ENST00000495531 483 ntBASIC3.21□□□□□ -1.9
COPAP53621 AK3P2-201ENST00000507976 429 ntBASIC3.21□□□□□ -1.9
COPAP53621 ACA59.2-201ENST00000517061 156 ntBASIC3.21□□□□□ -1.9
COPAP53621 HSPE1P20-201ENST00000538133 289 ntBASIC3.21□□□□□ -1.9
COPAP53621 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.21□□□□□ -1.9
COPAP53621 LARP7P3-201ENST00000579888 337 ntBASIC3.21□□□□□ -1.9
COPAP53621 MIR5690-201ENST00000583739 73 ntBASIC3.21□□□□□ -1.9
COPAP53621 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.21□□□□□ -1.9
COPAP53621 AL591516.1-201ENST00000611326 274 ntBASIC3.21□□□□□ -1.9
COPAP53621 SCARNA15.3-201ENST00000626315 122 ntBASIC3.21□□□□□ -1.9
COPAP53621 SCARNA4.1-201ENST00000628597 123 ntBASIC3.21□□□□□ -1.9
COPAP53621 MTND4LP32-201ENST00000636111 270 ntBASIC3.21□□□□□ -1.9
COPAP53621 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.21□□□□□ -1.9
COPAP53621 U4.7-201ENST00000638126 106 ntBASIC3.21□□□□□ -1.9
COPAP53621 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
COPAP53621 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
COPAP53621 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
COPAP53621 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
COPAP53621 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.2□□□□□ -1.9
COPAP53621 AC010889.1-201ENST00000566193 2666 ntBASIC3.2□□□□□ -1.9
COPAP53621 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
COPAP53621 RNU1-140P-201ENST00000365040 165 ntBASIC3.2□□□□□ -1.9
COPAP53621 Y_RNA.315-201ENST00000365117 102 ntBASIC3.2□□□□□ -1.9
COPAP53621 SNORD116-20-201ENST00000384529 92 ntBASIC3.2□□□□□ -1.9
COPAP53621 SNORA46-201ENST00000384762 135 ntBASIC3.2□□□□□ -1.9
COPAP53621 RNU6-750P-201ENST00000390946 107 ntBASIC3.2□□□□□ -1.9
COPAP53621 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.2□□□□□ -1.9
COPAP53621 AC244505.4-201ENST00000434905 287 ntBASIC3.2□□□□□ -1.9
COPAP53621 SSXP5-201ENST00000443473 287 ntBASIC3.2□□□□□ -1.9
COPAP53621 RNU6-1037P-201ENST00000459571 107 ntBASIC3.2□□□□□ -1.9
COPAP53621 RPL23AP49-201ENST00000492925 468 ntBASIC3.2□□□□□ -1.9
COPAP53621 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
COPAP53621 SNORD19.2-201ENST00000516978 73 ntBASIC3.2□□□□□ -1.9
COPAP53621 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.2□□□□□ -1.9
COPAP53621 AC010186.2-204ENST00000537668 439 ntBASIC3.2□□□□□ -1.9
COPAP53621 AC103996.1-201ENST00000555468 102 ntBASIC3.2□□□□□ -1.9
COPAP53621 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.2□□□□□ -1.9
COPAP53621 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.2□□□□□ -1.9
COPAP53621 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.2□□□□□ -1.9
COPAP53621 AC044792.1-201ENST00000593294 196 ntBASIC3.2□□□□□ -1.9
COPAP53621 AL356055.1-201ENST00000602528 446 ntBASIC3.2□□□□□ -1.9
COPAP53621 AL133255.1-201ENST00000606374 441 ntBASIC3.2□□□□□ -1.9
COPAP53621 AC019193.3-201ENST00000609144 554 ntBASIC3.2□□□□□ -1.9
COPAP53621 AL161423.1-201ENST00000613700 262 ntBASIC3.2□□□□□ -1.9
COPAP53621 uc_338.25-201ENST00000613756 156 ntBASIC3.2□□□□□ -1.9
COPAP53621 AC084781.2-201ENST00000615568 161 ntBASIC3.2□□□□□ -1.9
COPAP53621 AC244517.12-201ENST00000623581 663 ntBASIC3.2□□□□□ -1.9
COPAP53621 AC006386.2-201ENST00000624491 75 ntBASIC3.2□□□□□ -1.9
COPAP53621 AC012005.1-201ENST00000624575 75 ntBASIC3.2□□□□□ -1.9
COPAP53621 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms