Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.51□□□□□ -2.01
PDX1P52945 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
PDX1P52945 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
PDX1P52945 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.51□□□□□ -2.01
PDX1P52945 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.51□□□□□ -2.01
PDX1P52945 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.51□□□□□ -2.01
PDX1P52945 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PDX1P52945 RNU6-858P-201ENST00000362436 107 ntBASIC2.51□□□□□ -2.01
PDX1P52945 SNORD62.1-201ENST00000362541 86 ntBASIC2.51□□□□□ -2.01
PDX1P52945 RNU6-1252P-201ENST00000363054 104 ntBASIC2.51□□□□□ -2.01
PDX1P52945 SNORD116-20-201ENST00000384529 92 ntBASIC2.51□□□□□ -2.01
PDX1P52945 MIR518C-201ENST00000384822 101 ntBASIC2.51□□□□□ -2.01
PDX1P52945 EIF4E2P1-201ENST00000393781 255 ntBASIC2.51□□□□□ -2.01
PDX1P52945 AL133475.1-201ENST00000404414 305 ntBASIC2.51□□□□□ -2.01
PDX1P52945 AL162578.1-201ENST00000406202 378 ntBASIC2.51□□□□□ -2.01
PDX1P52945 RNA5SP118-201ENST00000410385 109 ntBASIC2.51□□□□□ -2.01
PDX1P52945 RNU6-1140P-201ENST00000410517 106 ntBASIC2.51□□□□□ -2.01
PDX1P52945 RNU6-1328P-201ENST00000410938 106 ntBASIC2.51□□□□□ -2.01
PDX1P52945 RNU6-373P-201ENST00000411247 98 ntBASIC2.51□□□□□ -2.01
PDX1P52945 SNORD56-201ENST00000413522 71 ntBASIC2.51□□□□□ -2.01
PDX1P52945 ARL5AP1-201ENST00000418991 388 ntBASIC2.51□□□□□ -2.01
PDX1P52945 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.51□□□□□ -2.01
PDX1P52945 GZMAP1-201ENST00000503054 631 ntBASIC2.51□□□□□ -2.01
PDX1P52945 ANXA2P1-201ENST00000505539 926 ntBASIC2.51□□□□□ -2.01
PDX1P52945 AL117351.2-201ENST00000513571 157 ntBASIC2.51□□□□□ -2.01
PDX1P52945 RNU6-358P-201ENST00000516564 75 ntBASIC2.51□□□□□ -2.01
PDX1P52945 BTF3P12-201ENST00000519620 469 ntBASIC2.51□□□□□ -2.01
PDX1P52945 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.51□□□□□ -2.01
PDX1P52945 AP005597.4-201ENST00000526762 229 ntBASIC2.51□□□□□ -2.01
PDX1P52945 CYCSP27-201ENST00000527643 293 ntBASIC2.51□□□□□ -2.01
PDX1P52945 AP000763.2-201ENST00000540641 163 ntBASIC2.51□□□□□ -2.01
PDX1P52945 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.51□□□□□ -2.01
PDX1P52945 RNU6-85P-201ENST00000605989 107 ntBASIC2.51□□□□□ -2.01
PDX1P52945 CTSLP2-204ENST00000629029 392 ntBASIC2.51□□□□□ -2.01
PDX1P52945 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
PDX1P52945 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.5□□□□□ -2.01
PDX1P52945 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.5□□□□□ -2.01
PDX1P52945 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
PDX1P52945 Y_RNA.86-201ENST00000363020 111 ntBASIC2.5□□□□□ -2.01
PDX1P52945 Y_RNA.157-201ENST00000363638 102 ntBASIC2.5□□□□□ -2.01
PDX1P52945 RNU5E-7P-201ENST00000365290 117 ntBASIC2.5□□□□□ -2.01
PDX1P52945 Y_RNA.390-201ENST00000383932 102 ntBASIC2.5□□□□□ -2.01
PDX1P52945 RNU6-748P-201ENST00000384648 107 ntBASIC2.5□□□□□ -2.01
PDX1P52945 MIR147B-201ENST00000390185 80 ntBASIC2.5□□□□□ -2.01
PDX1P52945 AL356776.1-201ENST00000406574 447 ntBASIC2.5□□□□□ -2.01
PDX1P52945 AL117339.3-201ENST00000418733 162 ntBASIC2.5□□□□□ -2.01
PDX1P52945 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.5□□□□□ -2.01
PDX1P52945 AL513185.2-201ENST00000425543 193 ntBASIC2.5□□□□□ -2.01
PDX1P52945 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.5□□□□□ -2.01
PDX1P52945 AC010095.1-201ENST00000443543 144 ntBASIC2.5□□□□□ -2.01
PDX1P52945 OSTCP8-201ENST00000445117 448 ntBASIC2.5□□□□□ -2.01
PDX1P52945 RNU7-138P-201ENST00000459479 64 ntBASIC2.5□□□□□ -2.01
PDX1P52945 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.5□□□□□ -2.01
PDX1P52945 MTCYBP40-201ENST00000509390 1135 ntBASIC2.5□□□□□ -2.01
PDX1P52945 FAM206BP-201ENST00000510179 541 ntBASIC2.5□□□□□ -2.01
PDX1P52945 RNU6-1314P-201ENST00000517139 104 ntBASIC2.5□□□□□ -2.01
PDX1P52945 RNU6-323P-201ENST00000521915 107 ntBASIC2.5□□□□□ -2.01
PDX1P52945 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.5□□□□□ -2.01
PDX1P52945 AC243972.3-201ENST00000539655 198 ntBASIC2.5□□□□□ -2.01
PDX1P52945 AC025423.5-201ENST00000550230 219 ntBASIC2.5□□□□□ -2.01
PDX1P52945 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.5□□□□□ -2.01
PDX1P52945 AL357078.3-201ENST00000607528 618 ntBASIC2.5□□□□□ -2.01
PDX1P52945 AC097372.5-201ENST00000623665 376 ntBASIC2.5□□□□□ -2.01
PDX1P52945 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PDX1P52945 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.5□□□□□ -2.01
PDX1P52945 RNU6-428P-201ENST00000362942 107 ntBASIC2.49□□□□□ -2.01
PDX1P52945 AL096701.2-201ENST00000416920 238 ntBASIC2.49□□□□□ -2.01
PDX1P52945 AC092473.1-201ENST00000441098 221 ntBASIC2.49□□□□□ -2.01
PDX1P52945 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.49□□□□□ -2.01
PDX1P52945 AL031274.1-201ENST00000450334 232 ntBASIC2.49□□□□□ -2.01
PDX1P52945 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PDX1P52945 RPL7P43-201ENST00000478876 753 ntBASIC2.49□□□□□ -2.01
PDX1P52945 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.49□□□□□ -2.01
PDX1P52945 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.49□□□□□ -2.01
PDX1P52945 MTCO2P30-201ENST00000503662 364 ntBASIC2.49□□□□□ -2.01
PDX1P52945 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.49□□□□□ -2.01
PDX1P52945 RNU5F-8P-201ENST00000515941 111 ntBASIC2.49□□□□□ -2.01
PDX1P52945 AC069113.1-201ENST00000517763 267 ntBASIC2.49□□□□□ -2.01
PDX1P52945 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.49□□□□□ -2.01
PDX1P52945 AF235103.2-201ENST00000525753 346 ntBASIC2.49□□□□□ -2.01
PDX1P52945 AC009163.5-201ENST00000575421 637 ntBASIC2.49□□□□□ -2.01
PDX1P52945 MIR3941-201ENST00000582572 103 ntBASIC2.49□□□□□ -2.01
PDX1P52945 MIR4635-201ENST00000583759 79 ntBASIC2.49□□□□□ -2.01
PDX1P52945 OR1M4P-201ENST00000589199 287 ntBASIC2.49□□□□□ -2.01
PDX1P52945 AL670379.10-201ENST00000604330 253 ntBASIC2.49□□□□□ -2.01
PDX1P52945 AL670379.9-201ENST00000605428 253 ntBASIC2.49□□□□□ -2.01
PDX1P52945 AC021646.1-201ENST00000605469 484 ntBASIC2.49□□□□□ -2.01
PDX1P52945 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.49□□□□□ -2.01
PDX1P52945 U4.7-201ENST00000638126 106 ntBASIC2.49□□□□□ -2.01
PDX1P52945 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PDX1P52945 ZNF658B-202ENST00000615961 3375 ntBASIC2.49□□□□□ -2.01
PDX1P52945 ZNF519P1-201ENST00000449011 1626 ntBASIC2.49□□□□□ -2.01
PDX1P52945 RBBP8P1-201ENST00000449447 1844 ntBASIC2.49□□□□□ -2.01
PDX1P52945 CASC19-280ENST00000642102 1351 ntBASIC2.49□□□□□ -2.01
PDX1P52945 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.48□□□□□ -2.01
PDX1P52945 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.48□□□□□ -2.01
PDX1P52945 AL513475.1-201ENST00000406602 315 ntBASIC2.48□□□□□ -2.01
PDX1P52945 USP9YP20-201ENST00000419224 558 ntBASIC2.48□□□□□ -2.01
PDX1P52945 ATG3P1-201ENST00000419507 911 ntBASIC2.48□□□□□ -2.01
PDX1P52945 AC007547.1-201ENST00000462177 490 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms