Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 RNU6-331P-201ENST00000384724 107 ntBASIC0.51□□□□□ -2.33
GTF2A1P52655 MIR508-201ENST00000384857 115 ntBASIC0.51□□□□□ -2.33
GTF2A1P52655 MTCO1P56-201ENST00000401674 224 ntBASIC0.51□□□□□ -2.33
GTF2A1P52655 Y_RNA.597-201ENST00000410463 100 ntBASIC0.51□□□□□ -2.33
GTF2A1P52655 RNU2-23P-201ENST00000410545 195 ntBASIC0.51□□□□□ -2.33
GTF2A1P52655 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.51□□□□□ -2.33
GTF2A1P52655 SNRPEP7-201ENST00000438350 220 ntBASIC0.51□□□□□ -2.33
GTF2A1P52655 CALM1P1-201ENST00000442082 433 ntBASIC0.51□□□□□ -2.33
GTF2A1P52655 RPS27AP8-201ENST00000452665 445 ntBASIC0.51□□□□□ -2.33
GTF2A1P52655 BET1P1-201ENST00000482276 359 ntBASIC0.51□□□□□ -2.33
GTF2A1P52655 RPL39P36-201ENST00000490784 156 ntBASIC0.51□□□□□ -2.33
GTF2A1P52655 AC134050.1-201ENST00000495088 933 ntBASIC0.51□□□□□ -2.33
GTF2A1P52655 AC034244.1-201ENST00000507687 207 ntBASIC0.51□□□□□ -2.33
GTF2A1P52655 RNA5SP458-201ENST00000516188 119 ntBASIC0.51□□□□□ -2.33
GTF2A1P52655 RNA5SP121-201ENST00000516537 101 ntBASIC0.51□□□□□ -2.33
GTF2A1P52655 RNU5A-4P-201ENST00000516588 111 ntBASIC0.51□□□□□ -2.33
GTF2A1P52655 SNORA70.22-201ENST00000517160 124 ntBASIC0.51□□□□□ -2.33
GTF2A1P52655 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.51□□□□□ -2.33
GTF2A1P52655 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.51□□□□□ -2.33
GTF2A1P52655 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.51□□□□□ -2.33
GTF2A1P52655 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.51□□□□□ -2.33
GTF2A1P52655 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.51□□□□□ -2.33
GTF2A1P52655 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC0.51□□□□□ -2.33
GTF2A1P52655 MIR3664-201ENST00000579074 99 ntBASIC0.51□□□□□ -2.33
GTF2A1P52655 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.51□□□□□ -2.33
GTF2A1P52655 AC022022.2-201ENST00000602989 360 ntBASIC0.51□□□□□ -2.33
GTF2A1P52655 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.51□□□□□ -2.33
GTF2A1P52655 AL358072.1-201ENST00000604156 575 ntBASIC0.51□□□□□ -2.33
GTF2A1P52655 BNIP3P31-201ENST00000604515 566 ntBASIC0.51□□□□□ -2.33
GTF2A1P52655 AL356094.1-201ENST00000624663 1212 ntBASIC0.51□□□□□ -2.33
GTF2A1P52655 AL079343.1-201ENST00000572358 1771 ntBASIC0.5□□□□□ -2.33
GTF2A1P52655 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.5□□□□□ -2.33
GTF2A1P52655 MIR96-201ENST00000362288 78 ntBASIC0.5□□□□□ -2.33
GTF2A1P52655 RNU6-942P-201ENST00000363002 107 ntBASIC0.5□□□□□ -2.33
GTF2A1P52655 SNORD114-24-201ENST00000365029 72 ntBASIC0.5□□□□□ -2.33
GTF2A1P52655 MIR19B1-201ENST00000384829 87 ntBASIC0.5□□□□□ -2.33
GTF2A1P52655 MIR194-1-201ENST00000384892 85 ntBASIC0.5□□□□□ -2.33
GTF2A1P52655 MIR10B-201ENST00000385011 110 ntBASIC0.5□□□□□ -2.33
GTF2A1P52655 AL356776.1-201ENST00000406574 447 ntBASIC0.5□□□□□ -2.33
GTF2A1P52655 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.5□□□□□ -2.33
GTF2A1P52655 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.5□□□□□ -2.33
GTF2A1P52655 RPS15AP10-201ENST00000432472 382 ntBASIC0.5□□□□□ -2.33
GTF2A1P52655 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.5□□□□□ -2.33
GTF2A1P52655 RNU6-333P-201ENST00000459117 107 ntBASIC0.5□□□□□ -2.33
GTF2A1P52655 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.5□□□□□ -2.33
GTF2A1P52655 AC009646.1-201ENST00000510455 318 ntBASIC0.5□□□□□ -2.33
GTF2A1P52655 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.5□□□□□ -2.33
GTF2A1P52655 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.5□□□□□ -2.33
GTF2A1P52655 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.5□□□□□ -2.33
GTF2A1P52655 AC060771.1-201ENST00000582031 164 ntBASIC0.5□□□□□ -2.33
GTF2A1P52655 MIR4293-201ENST00000584305 78 ntBASIC0.5□□□□□ -2.33
GTF2A1P52655 AL590229.1-201ENST00000603497 542 ntBASIC0.5□□□□□ -2.33
GTF2A1P52655 BNIP3P9-201ENST00000603714 553 ntBASIC0.5□□□□□ -2.33
GTF2A1P52655 MIR8084-201ENST00000614105 89 ntBASIC0.5□□□□□ -2.33
GTF2A1P52655 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.5□□□□□ -2.33
GTF2A1P52655 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.5□□□□□ -2.33
GTF2A1P52655 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.5□□□□□ -2.33
GTF2A1P52655 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
GTF2A1P52655 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
GTF2A1P52655 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.49□□□□□ -2.33
GTF2A1P52655 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.49□□□□□ -2.33
GTF2A1P52655 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.49□□□□□ -2.33
GTF2A1P52655 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.49□□□□□ -2.33
GTF2A1P52655 TOMM22P6-201ENST00000465035 409 ntBASIC0.49□□□□□ -2.33
GTF2A1P52655 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.49□□□□□ -2.33
GTF2A1P52655 AC121161.1-201ENST00000510606 652 ntBASIC0.49□□□□□ -2.33
GTF2A1P52655 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
GTF2A1P52655 RNU6-143P-201ENST00000516942 93 ntBASIC0.49□□□□□ -2.33
GTF2A1P52655 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.49□□□□□ -2.33
GTF2A1P52655 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.49□□□□□ -2.33
GTF2A1P52655 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.49□□□□□ -2.33
GTF2A1P52655 AL359821.1-201ENST00000605519 182 ntBASIC0.49□□□□□ -2.33
GTF2A1P52655 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.49□□□□□ -2.33
GTF2A1P52655 AC063943.3-201ENST00000615562 356 ntBASIC0.49□□□□□ -2.33
GTF2A1P52655 AP000676.3-201ENST00000623299 569 ntBASIC0.49□□□□□ -2.33
GTF2A1P52655 AC023934.1-201ENST00000574529 2389 ntBASIC0.49□□□□□ -2.33
GTF2A1P52655 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.48□□□□□ -2.33
GTF2A1P52655 MTND4P21-201ENST00000453886 1357 ntBASIC0.48□□□□□ -2.33
GTF2A1P52655 Y_RNA.332-201ENST00000365271 113 ntBASIC0.48□□□□□ -2.33
GTF2A1P52655 MIR19A-201ENST00000384878 82 ntBASIC0.48□□□□□ -2.33
GTF2A1P52655 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.48□□□□□ -2.33
GTF2A1P52655 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.48□□□□□ -2.33
GTF2A1P52655 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.48□□□□□ -2.33
GTF2A1P52655 MTND1P30-201ENST00000441241 901 ntBASIC0.48□□□□□ -2.33
GTF2A1P52655 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.48□□□□□ -2.33
GTF2A1P52655 AC108059.3-201ENST00000456388 214 ntBASIC0.48□□□□□ -2.33
GTF2A1P52655 HMGB1P30-201ENST00000492455 606 ntBASIC0.48□□□□□ -2.33
GTF2A1P52655 RNU6-64P-201ENST00000517119 105 ntBASIC0.48□□□□□ -2.33
GTF2A1P52655 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.48□□□□□ -2.33
GTF2A1P52655 AC016727.1-205ENST00000605437 569 ntBASIC0.48□□□□□ -2.33
GTF2A1P52655 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.48□□□□□ -2.33
GTF2A1P52655 AC130324.3-201ENST00000614165 542 ntBASIC0.48□□□□□ -2.33
GTF2A1P52655 AL512643.1-201ENST00000635735 524 ntBASIC0.48□□□□□ -2.33
GTF2A1P52655 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.48□□□□□ -2.33
GTF2A1P52655 MIR340-201ENST00000362125 95 ntBASIC0.47□□□□□ -2.33
GTF2A1P52655 RNU5B-1-201ENST00000363286 116 ntBASIC0.47□□□□□ -2.33
GTF2A1P52655 Y_RNA.534-201ENST00000384599 112 ntBASIC0.47□□□□□ -2.33
GTF2A1P52655 RNU6-817P-201ENST00000391083 104 ntBASIC0.47□□□□□ -2.33
GTF2A1P52655 AL079342.2-201ENST00000403367 482 ntBASIC0.47□□□□□ -2.33
GTF2A1P52655 UBE2V1P15-201ENST00000407776 448 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms