Protein–RNA interactions for Protein: P49711

CTCF, Transcriptional repressor CTCF, humanhuman

Predicted RBP Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFP49711 AC092593.1-201ENST00000515413 1815 ntBASIC2.98□□□□□ -1.93
CTCFP49711 RNY3P3-201ENST00000363816 102 ntBASIC2.98□□□□□ -1.93
CTCFP49711 MIR514A2-201ENST00000385131 88 ntBASIC2.98□□□□□ -1.93
CTCFP49711 MIR514A3-201ENST00000385132 88 ntBASIC2.98□□□□□ -1.93
CTCFP49711 SNORD37.1-201ENST00000390968 65 ntBASIC2.98□□□□□ -1.93
CTCFP49711 RNA5SP213-201ENST00000391031 106 ntBASIC2.98□□□□□ -1.93
CTCFP49711 SNORD115-47-201ENST00000391226 86 ntBASIC2.98□□□□□ -1.93
CTCFP49711 RPLP0P7-201ENST00000416050 667 ntBASIC2.98□□□□□ -1.93
CTCFP49711 EIF1P1-201ENST00000421436 341 ntBASIC2.98□□□□□ -1.93
CTCFP49711 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CTCFP49711 AL161651.1-201ENST00000440882 223 ntBASIC2.98□□□□□ -1.93
CTCFP49711 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.98□□□□□ -1.93
CTCFP49711 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.98□□□□□ -1.93
CTCFP49711 PRPS1P1-201ENST00000445305 876 ntBASIC2.98□□□□□ -1.93
CTCFP49711 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.98□□□□□ -1.93
CTCFP49711 AC233279.1-201ENST00000455300 423 ntBASIC2.98□□□□□ -1.93
CTCFP49711 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CTCFP49711 BTF3P15-201ENST00000455606 336 ntBASIC2.98□□□□□ -1.93
CTCFP49711 AC103975.1-201ENST00000482506 483 ntBASIC2.98□□□□□ -1.93
CTCFP49711 RNU6-581P-201ENST00000516214 105 ntBASIC2.98□□□□□ -1.93
CTCFP49711 RPPH1-2P-201ENST00000516688 293 ntBASIC2.98□□□□□ -1.93
CTCFP49711 SNORD19.2-201ENST00000516978 73 ntBASIC2.98□□□□□ -1.93
CTCFP49711 HSPE1P18-201ENST00000517602 280 ntBASIC2.98□□□□□ -1.93
CTCFP49711 MTND1P5-201ENST00000517906 940 ntBASIC2.98□□□□□ -1.93
CTCFP49711 ELOCP31-201ENST00000540463 467 ntBASIC2.98□□□□□ -1.93
CTCFP49711 AL118558.2-201ENST00000556294 238 ntBASIC2.98□□□□□ -1.93
CTCFP49711 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.98□□□□□ -1.93
CTCFP49711 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.98□□□□□ -1.93
CTCFP49711 AC091152.3-201ENST00000604227 325 ntBASIC2.98□□□□□ -1.93
CTCFP49711 snoU13.31-201ENST00000607291 104 ntBASIC2.98□□□□□ -1.93
CTCFP49711 AC010378.1-201ENST00000619270 362 ntBASIC2.98□□□□□ -1.93
CTCFP49711 AL031601.2-202ENST00000622650 282 ntBASIC2.98□□□□□ -1.93
CTCFP49711 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.97□□□□□ -1.93
CTCFP49711 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CTCFP49711 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.97□□□□□ -1.93
CTCFP49711 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CTCFP49711 RNU1-100P-201ENST00000365255 165 ntBASIC2.97□□□□□ -1.93
CTCFP49711 RNU6-72P-201ENST00000384285 79 ntBASIC2.97□□□□□ -1.93
CTCFP49711 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.97□□□□□ -1.93
CTCFP49711 HMGN2P35-201ENST00000412164 270 ntBASIC2.97□□□□□ -1.93
CTCFP49711 RPS3AP44-201ENST00000425466 790 ntBASIC2.97□□□□□ -1.93
CTCFP49711 AC092427.1-202ENST00000430569 476 ntBASIC2.97□□□□□ -1.93
CTCFP49711 AC112220.1-201ENST00000434628 355 ntBASIC2.97□□□□□ -1.93
CTCFP49711 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.97□□□□□ -1.93
CTCFP49711 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.97□□□□□ -1.93
CTCFP49711 RPS15AP7-201ENST00000439294 405 ntBASIC2.97□□□□□ -1.93
CTCFP49711 OSTCP8-201ENST00000445117 448 ntBASIC2.97□□□□□ -1.93
CTCFP49711 AC107626.1-201ENST00000471084 183 ntBASIC2.97□□□□□ -1.93
CTCFP49711 SRIP1-201ENST00000489235 288 ntBASIC2.97□□□□□ -1.93
CTCFP49711 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.97□□□□□ -1.93
CTCFP49711 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.97□□□□□ -1.93
CTCFP49711 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.97□□□□□ -1.93
CTCFP49711 MRPS36P2-201ENST00000512569 299 ntBASIC2.97□□□□□ -1.93
CTCFP49711 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.97□□□□□ -1.93
CTCFP49711 RNU6-718P-201ENST00000516166 105 ntBASIC2.97□□□□□ -1.93
CTCFP49711 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.97□□□□□ -1.93
CTCFP49711 AC009163.5-201ENST00000575421 637 ntBASIC2.97□□□□□ -1.93
CTCFP49711 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.97□□□□□ -1.93
CTCFP49711 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.97□□□□□ -1.93
CTCFP49711 AL355877.2-201ENST00000603670 358 ntBASIC2.97□□□□□ -1.93
CTCFP49711 AC090115.4-201ENST00000609970 188 ntBASIC2.97□□□□□ -1.93
CTCFP49711 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.97□□□□□ -1.93
CTCFP49711 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.97□□□□□ -1.93
CTCFP49711 RNU1-17P-201ENST00000363022 152 ntBASIC2.96□□□□□ -1.94
CTCFP49711 Y_RNA.256-201ENST00000364594 104 ntBASIC2.96□□□□□ -1.94
CTCFP49711 AL096701.2-201ENST00000416920 238 ntBASIC2.96□□□□□ -1.94
CTCFP49711 PGBD4P6-201ENST00000421501 610 ntBASIC2.96□□□□□ -1.94
CTCFP49711 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.96□□□□□ -1.94
CTCFP49711 MTND3P16-201ENST00000452205 344 ntBASIC2.96□□□□□ -1.94
CTCFP49711 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.96□□□□□ -1.94
CTCFP49711 RNU7-167P-201ENST00000459160 62 ntBASIC2.96□□□□□ -1.94
CTCFP49711 DYNLL1P5-201ENST00000467158 270 ntBASIC2.96□□□□□ -1.94
CTCFP49711 MTCO3P38-201ENST00000468910 766 ntBASIC2.96□□□□□ -1.94
CTCFP49711 AP000852.1-201ENST00000472460 573 ntBASIC2.96□□□□□ -1.94
CTCFP49711 AC090525.1-201ENST00000479116 478 ntBASIC2.96□□□□□ -1.94
CTCFP49711 RPL38P4-201ENST00000502376 214 ntBASIC2.96□□□□□ -1.94
CTCFP49711 AC116655.1-201ENST00000508324 901 ntBASIC2.96□□□□□ -1.94
CTCFP49711 AC234781.5-201ENST00000508429 271 ntBASIC2.96□□□□□ -1.94
CTCFP49711 SNORD60.2-201ENST00000516883 86 ntBASIC2.96□□□□□ -1.94
CTCFP49711 SNORA31.18-201ENST00000517043 134 ntBASIC2.96□□□□□ -1.94
CTCFP49711 RN7SKP40-201ENST00000517211 242 ntBASIC2.96□□□□□ -1.94
CTCFP49711 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.96□□□□□ -1.94
CTCFP49711 MTND1P35-201ENST00000526739 508 ntBASIC2.96□□□□□ -1.94
CTCFP49711 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.96□□□□□ -1.94
CTCFP49711 AC004486.1-201ENST00000546846 233 ntBASIC2.96□□□□□ -1.94
CTCFP49711 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.96□□□□□ -1.94
CTCFP49711 AC090115.3-201ENST00000553218 849 ntBASIC2.96□□□□□ -1.94
CTCFP49711 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.96□□□□□ -1.94
CTCFP49711 MIR5194-201ENST00000582634 120 ntBASIC2.96□□□□□ -1.94
CTCFP49711 AL391813.1-201ENST00000603098 260 ntBASIC2.96□□□□□ -1.94
CTCFP49711 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.96□□□□□ -1.94
CTCFP49711 AC092794.1-201ENST00000612734 582 ntBASIC2.96□□□□□ -1.94
CTCFP49711 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.96□□□□□ -1.94
CTCFP49711 Y_RNA.89-201ENST00000363031 102 ntBASIC2.95□□□□□ -1.94
CTCFP49711 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.95□□□□□ -1.94
CTCFP49711 FGF7P8-201ENST00000402994 292 ntBASIC2.95□□□□□ -1.94
CTCFP49711 U3.37-201ENST00000408528 213 ntBASIC2.95□□□□□ -1.94
CTCFP49711 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.95□□□□□ -1.94
CTCFP49711 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.95□□□□□ -1.94
CTCFP49711 snoU109.2-201ENST00000459316 135 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms