Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 PPP1R2P5-201ENST00000457256 603 ntBASIC2.39□□□□□ -2.03
NKX2-1P43699 AC008571.1-201ENST00000467232 300 ntBASIC2.39□□□□□ -2.03
NKX2-1P43699 RPL36AP48-201ENST00000485521 314 ntBASIC2.39□□□□□ -2.03
NKX2-1P43699 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.39□□□□□ -2.03
NKX2-1P43699 AC103851.1-201ENST00000506833 274 ntBASIC2.39□□□□□ -2.03
NKX2-1P43699 AC096745.1-201ENST00000509945 370 ntBASIC2.39□□□□□ -2.03
NKX2-1P43699 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.39□□□□□ -2.03
NKX2-1P43699 TBCAP3-201ENST00000512475 312 ntBASIC2.39□□□□□ -2.03
NKX2-1P43699 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.39□□□□□ -2.03
NKX2-1P43699 SNORA9.3-201ENST00000516383 129 ntBASIC2.39□□□□□ -2.03
NKX2-1P43699 RNU6-826P-201ENST00000516827 104 ntBASIC2.39□□□□□ -2.03
NKX2-1P43699 CKS1BP7-201ENST00000522230 235 ntBASIC2.39□□□□□ -2.03
NKX2-1P43699 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.39□□□□□ -2.03
NKX2-1P43699 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.39□□□□□ -2.03
NKX2-1P43699 IMMP1LP2-201ENST00000552954 492 ntBASIC2.39□□□□□ -2.03
NKX2-1P43699 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.39□□□□□ -2.03
NKX2-1P43699 RPS3AP23-202ENST00000574601 686 ntBASIC2.39□□□□□ -2.03
NKX2-1P43699 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.39□□□□□ -2.03
NKX2-1P43699 BNIP3P16-201ENST00000589779 534 ntBASIC2.39□□□□□ -2.03
NKX2-1P43699 RPS15AP11-201ENST00000594193 385 ntBASIC2.39□□□□□ -2.03
NKX2-1P43699 AL356280.1-201ENST00000603614 379 ntBASIC2.39□□□□□ -2.03
NKX2-1P43699 AL121917.1-203ENST00000605534 577 ntBASIC2.39□□□□□ -2.03
NKX2-1P43699 RNU6-6P-201ENST00000606623 107 ntBASIC2.39□□□□□ -2.03
NKX2-1P43699 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.39□□□□□ -2.03
NKX2-1P43699 AC104237.2-201ENST00000612456 443 ntBASIC2.39□□□□□ -2.03
NKX2-1P43699 AC024581.2-201ENST00000619986 252 ntBASIC2.39□□□□□ -2.03
NKX2-1P43699 U6.105-201ENST00000637379 88 ntBASIC2.39□□□□□ -2.03
NKX2-1P43699 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.39□□□□□ -2.03
NKX2-1P43699 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
NKX2-1P43699 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
NKX2-1P43699 MTND4P27-201ENST00000450813 1354 ntBASIC2.38□□□□□ -2.03
NKX2-1P43699 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
NKX2-1P43699 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
NKX2-1P43699 AL035425.3-201ENST00000564206 4996 ntBASIC2.38□□□□□ -2.03
NKX2-1P43699 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
NKX2-1P43699 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.38□□□□□ -2.03
NKX2-1P43699 RNA5SP72-201ENST00000364442 117 ntBASIC2.38□□□□□ -2.03
NKX2-1P43699 RNU6-622P-201ENST00000384272 103 ntBASIC2.38□□□□□ -2.03
NKX2-1P43699 RNU6-95P-201ENST00000384697 107 ntBASIC2.38□□□□□ -2.03
NKX2-1P43699 MIR670-201ENST00000390142 98 ntBASIC2.38□□□□□ -2.03
NKX2-1P43699 RNU6-1106P-201ENST00000390845 107 ntBASIC2.38□□□□□ -2.03
NKX2-1P43699 RNU4-47P-201ENST00000410876 114 ntBASIC2.38□□□□□ -2.03
NKX2-1P43699 AL139396.1-201ENST00000421137 167 ntBASIC2.38□□□□□ -2.03
NKX2-1P43699 BX276092.3-201ENST00000424182 230 ntBASIC2.38□□□□□ -2.03
NKX2-1P43699 AC006028.1-201ENST00000438379 402 ntBASIC2.38□□□□□ -2.03
NKX2-1P43699 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.38□□□□□ -2.03
NKX2-1P43699 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.38□□□□□ -2.03
NKX2-1P43699 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
NKX2-1P43699 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.38□□□□□ -2.03
NKX2-1P43699 EEF1B2P7-201ENST00000451177 676 ntBASIC2.38□□□□□ -2.03
NKX2-1P43699 RN7SL863P-201ENST00000462370 296 ntBASIC2.38□□□□□ -2.03
NKX2-1P43699 AC109925.1-201ENST00000478069 331 ntBASIC2.38□□□□□ -2.03
NKX2-1P43699 RN7SL297P-201ENST00000483161 293 ntBASIC2.38□□□□□ -2.03
NKX2-1P43699 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.38□□□□□ -2.03
NKX2-1P43699 RNU6-377P-201ENST00000515965 102 ntBASIC2.38□□□□□ -2.03
NKX2-1P43699 RNU6-277P-201ENST00000516272 106 ntBASIC2.38□□□□□ -2.03
NKX2-1P43699 RN7SKP272-201ENST00000516988 232 ntBASIC2.38□□□□□ -2.03
NKX2-1P43699 SNORA31.23-201ENST00000517219 133 ntBASIC2.38□□□□□ -2.03
NKX2-1P43699 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.38□□□□□ -2.03
NKX2-1P43699 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.38□□□□□ -2.03
NKX2-1P43699 MIR1254-2-201ENST00000579553 63 ntBASIC2.38□□□□□ -2.03
NKX2-1P43699 MIR4429-201ENST00000580105 73 ntBASIC2.38□□□□□ -2.03
NKX2-1P43699 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.38□□□□□ -2.03
NKX2-1P43699 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.38□□□□□ -2.03
NKX2-1P43699 RPL23AP88-201ENST00000605759 454 ntBASIC2.38□□□□□ -2.03
NKX2-1P43699 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.38□□□□□ -2.03
NKX2-1P43699 MIR7975-201ENST00000619350 68 ntBASIC2.38□□□□□ -2.03
NKX2-1P43699 MIR6075-201ENST00000620782 95 ntBASIC2.38□□□□□ -2.03
NKX2-1P43699 AL359697.1-201ENST00000624879 587 ntBASIC2.38□□□□□ -2.03
NKX2-1P43699 AC080128.1-201ENST00000474389 1917 ntBASIC2.38□□□□□ -2.03
NKX2-1P43699 RBBP8P1-201ENST00000449447 1844 ntBASIC2.38□□□□□ -2.03
NKX2-1P43699 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NKX2-1P43699 AL355596.1-201ENST00000565399 3996 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 Z82195.2-201ENST00000612348 18351 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 OR56A5-201ENST00000340110 738 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
NKX2-1P43699 MIR22-201ENST00000362190 85 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 SNORD114-19-201ENST00000363072 75 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 RNU6-797P-201ENST00000363101 109 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 Y_RNA.184-201ENST00000363884 108 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 RNU6-105P-201ENST00000363909 104 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
NKX2-1P43699 RNU1-109P-201ENST00000383960 147 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 Y_RNA.482-201ENST00000384377 111 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
NKX2-1P43699 AL357075.1-201ENST00000404107 726 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 AL030996.1-201ENST00000411430 235 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.37□□□□□ -2.03
NKX2-1P43699 AC124916.1-201ENST00000444020 547 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 MRPL50P4-201ENST00000446432 475 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.37□□□□□ -2.03
NKX2-1P43699 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.37□□□□□ -2.03
NKX2-1P43699 RPL23AP70-201ENST00000483361 460 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 AC097462.2-201ENST00000504623 481 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 RNU6-1332P-201ENST00000516666 104 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 RN7SKP40-201ENST00000517211 242 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.37□□□□□ -2.03
NKX2-1P43699 AP005639.2-201ENST00000527592 928 ntBASIC2.37□□□□□ -2.03
NKX2-1P43699 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.37□□□□□ -2.03
NKX2-1P43699 AC010186.2-204ENST00000537668 439 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 157.6 ms