Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MTCO3P5-201ENST00000433620 714 ntBASIC1.79□□□□□ -2.12
SSR1P43307 NDUFB1P2-201ENST00000449477 176 ntBASIC1.79□□□□□ -2.12
SSR1P43307 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.79□□□□□ -2.12
SSR1P43307 AC116562.3-201ENST00000506136 177 ntBASIC1.79□□□□□ -2.12
SSR1P43307 AC104806.1-201ENST00000508720 308 ntBASIC1.79□□□□□ -2.12
SSR1P43307 FABP5P5-201ENST00000515537 406 ntBASIC1.79□□□□□ -2.12
SSR1P43307 MIR449C-201ENST00000516047 92 ntBASIC1.79□□□□□ -2.12
SSR1P43307 AC060788.1-201ENST00000521318 469 ntBASIC1.79□□□□□ -2.12
SSR1P43307 EEF1A1P37-201ENST00000522748 715 ntBASIC1.79□□□□□ -2.12
SSR1P43307 AC068587.5-201ENST00000528506 175 ntBASIC1.79□□□□□ -2.12
SSR1P43307 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.79□□□□□ -2.12
SSR1P43307 AC022022.2-201ENST00000602989 360 ntBASIC1.79□□□□□ -2.12
SSR1P43307 AC090578.1-201ENST00000604955 591 ntBASIC1.79□□□□□ -2.12
SSR1P43307 AL670379.2-201ENST00000604983 252 ntBASIC1.79□□□□□ -2.12
SSR1P43307 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.79□□□□□ -2.12
SSR1P43307 AC008250.2-201ENST00000615261 205 ntBASIC1.79□□□□□ -2.12
SSR1P43307 AL132822.1-201ENST00000617063 513 ntBASIC1.79□□□□□ -2.12
SSR1P43307 AF246928.1-201ENST00000623768 87 ntBASIC1.79□□□□□ -2.12
SSR1P43307 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.79□□□□□ -2.12
SSR1P43307 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SSR1P43307 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
SSR1P43307 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.78□□□□□ -2.12
SSR1P43307 RNU6-179P-201ENST00000363350 107 ntBASIC1.78□□□□□ -2.12
SSR1P43307 RNU6-546P-201ENST00000383991 107 ntBASIC1.78□□□□□ -2.12
SSR1P43307 RNU2-23P-201ENST00000410545 195 ntBASIC1.78□□□□□ -2.12
SSR1P43307 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.78□□□□□ -2.12
SSR1P43307 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.78□□□□□ -2.12
SSR1P43307 AC104058.1-201ENST00000448028 297 ntBASIC1.78□□□□□ -2.12
SSR1P43307 FDX1P2-201ENST00000450769 375 ntBASIC1.78□□□□□ -2.12
SSR1P43307 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.78□□□□□ -2.12
SSR1P43307 SNRPGP7-201ENST00000469016 106 ntBASIC1.78□□□□□ -2.12
SSR1P43307 UBL5P3-201ENST00000475112 231 ntBASIC1.78□□□□□ -2.12
SSR1P43307 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.78□□□□□ -2.12
SSR1P43307 AC009646.1-201ENST00000510455 318 ntBASIC1.78□□□□□ -2.12
SSR1P43307 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.78□□□□□ -2.12
SSR1P43307 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.78□□□□□ -2.12
SSR1P43307 SNORA44.1-201ENST00000517031 108 ntBASIC1.78□□□□□ -2.12
SSR1P43307 RNU6-232P-201ENST00000517144 64 ntBASIC1.78□□□□□ -2.12
SSR1P43307 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.78□□□□□ -2.12
SSR1P43307 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.78□□□□□ -2.12
SSR1P43307 AL160236.1-201ENST00000556317 195 ntBASIC1.78□□□□□ -2.12
SSR1P43307 AC090616.2-202ENST00000584248 222 ntBASIC1.78□□□□□ -2.12
SSR1P43307 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.78□□□□□ -2.12
SSR1P43307 AC013412.1-201ENST00000610687 192 ntBASIC1.78□□□□□ -2.12
SSR1P43307 uc_338.5-201ENST00000611839 155 ntBASIC1.78□□□□□ -2.12
SSR1P43307 RMST_7.1-201ENST00000621935 268 ntBASIC1.78□□□□□ -2.12
SSR1P43307 MIR1248-201ENST00000629190 106 ntBASIC1.78□□□□□ -2.12
SSR1P43307 OR4G2P-201ENST00000328113 903 ntBASIC1.77□□□□□ -2.13
SSR1P43307 RNU6-1210P-201ENST00000363775 107 ntBASIC1.77□□□□□ -2.13
SSR1P43307 SNORA62.1-201ENST00000364287 154 ntBASIC1.77□□□□□ -2.13
SSR1P43307 SNORD48-201ENST00000364953 64 ntBASIC1.77□□□□□ -2.13
SSR1P43307 SNORD115-7-201ENST00000365306 82 ntBASIC1.77□□□□□ -2.13
SSR1P43307 Y_RNA.367-201ENST00000365544 101 ntBASIC1.77□□□□□ -2.13
SSR1P43307 RNU11-3P-201ENST00000391111 133 ntBASIC1.77□□□□□ -2.13
SSR1P43307 SNORA12-201ENST00000391162 147 ntBASIC1.77□□□□□ -2.13
SSR1P43307 RNU2-3P-201ENST00000410144 191 ntBASIC1.77□□□□□ -2.13
SSR1P43307 Y_RNA.597-201ENST00000410463 100 ntBASIC1.77□□□□□ -2.13
SSR1P43307 Y_RNA.598-201ENST00000410480 95 ntBASIC1.77□□□□□ -2.13
SSR1P43307 CYCSP33-201ENST00000414485 327 ntBASIC1.77□□□□□ -2.13
SSR1P43307 RPL7P54-201ENST00000438336 674 ntBASIC1.77□□□□□ -2.13
SSR1P43307 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.77□□□□□ -2.13
SSR1P43307 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.77□□□□□ -2.13
SSR1P43307 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.77□□□□□ -2.13
SSR1P43307 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.77□□□□□ -2.13
SSR1P43307 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.77□□□□□ -2.13
SSR1P43307 RNU6-991P-201ENST00000516168 107 ntBASIC1.77□□□□□ -2.13
SSR1P43307 AC090572.1-201ENST00000519251 160 ntBASIC1.77□□□□□ -2.13
SSR1P43307 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.77□□□□□ -2.13
SSR1P43307 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.77□□□□□ -2.13
SSR1P43307 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.77□□□□□ -2.13
SSR1P43307 AK6P1-201ENST00000540219 478 ntBASIC1.77□□□□□ -2.13
SSR1P43307 MTND1P24-201ENST00000552175 861 ntBASIC1.77□□□□□ -2.13
SSR1P43307 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.77□□□□□ -2.13
SSR1P43307 AC026271.5-201ENST00000577873 130 ntBASIC1.77□□□□□ -2.13
SSR1P43307 SNRPGP17-201ENST00000603780 214 ntBASIC1.77□□□□□ -2.13
SSR1P43307 AL359314.1-201ENST00000616913 261 ntBASIC1.77□□□□□ -2.13
SSR1P43307 SCARNA4-202ENST00000625402 129 ntBASIC1.77□□□□□ -2.13
SSR1P43307 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.77□□□□□ -2.13
SSR1P43307 HAUS6P2-201ENST00000433254 2404 ntBASIC1.77□□□□□ -2.13
SSR1P43307 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SSR1P43307 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
SSR1P43307 MTND4P23-201ENST00000447723 1363 ntBASIC1.76□□□□□ -2.13
SSR1P43307 RNU6-553P-201ENST00000364047 96 ntBASIC1.76□□□□□ -2.13
SSR1P43307 RNY1P12-201ENST00000364251 105 ntBASIC1.76□□□□□ -2.13
SSR1P43307 RNU6-1164P-201ENST00000364428 107 ntBASIC1.76□□□□□ -2.13
SSR1P43307 MIR544A-201ENST00000384855 91 ntBASIC1.76□□□□□ -2.13
SSR1P43307 BTF3L4P2-201ENST00000392798 346 ntBASIC1.76□□□□□ -2.13
SSR1P43307 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.76□□□□□ -2.13
SSR1P43307 RPS3AP3-201ENST00000411933 242 ntBASIC1.76□□□□□ -2.13
SSR1P43307 EIF4EP2-201ENST00000422816 654 ntBASIC1.76□□□□□ -2.13
SSR1P43307 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.76□□□□□ -2.13
SSR1P43307 SDAD1P3-201ENST00000427380 333 ntBASIC1.76□□□□□ -2.13
SSR1P43307 MTND5P25-201ENST00000430499 799 ntBASIC1.76□□□□□ -2.13
SSR1P43307 RPL31P35-201ENST00000431058 377 ntBASIC1.76□□□□□ -2.13
SSR1P43307 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.76□□□□□ -2.13
SSR1P43307 RPL30P6-201ENST00000475925 342 ntBASIC1.76□□□□□ -2.13
SSR1P43307 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.76□□□□□ -2.13
SSR1P43307 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.76□□□□□ -2.13
SSR1P43307 RNU1-41P-201ENST00000516161 162 ntBASIC1.76□□□□□ -2.13
SSR1P43307 RNU1-48P-201ENST00000516400 162 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms