Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.84□□□□□ -2.11
PRPHP41219 ELOCP32-201ENST00000548625 324 ntBASIC1.84□□□□□ -2.11
PRPHP41219 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.84□□□□□ -2.11
PRPHP41219 HMGN1P30-201ENST00000589286 268 ntBASIC1.84□□□□□ -2.11
PRPHP41219 AC027807.2-201ENST00000616099 408 ntBASIC1.84□□□□□ -2.11
PRPHP41219 AC009878.1-201ENST00000621819 340 ntBASIC1.84□□□□□ -2.11
PRPHP41219 Y_RNA.22-201ENST00000362492 102 ntBASIC1.83□□□□□ -2.12
PRPHP41219 RNU6-78P-201ENST00000362897 107 ntBASIC1.83□□□□□ -2.12
PRPHP41219 Y_RNA.99-201ENST00000363138 105 ntBASIC1.83□□□□□ -2.12
PRPHP41219 RN7SKP101-201ENST00000411376 320 ntBASIC1.83□□□□□ -2.12
PRPHP41219 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.83□□□□□ -2.12
PRPHP41219 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.83□□□□□ -2.12
PRPHP41219 RPL39P29-201ENST00000447779 157 ntBASIC1.83□□□□□ -2.12
PRPHP41219 AL122001.1-201ENST00000457027 370 ntBASIC1.83□□□□□ -2.12
PRPHP41219 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.83□□□□□ -2.12
PRPHP41219 AC096745.1-201ENST00000509945 370 ntBASIC1.83□□□□□ -2.12
PRPHP41219 RNU6-991P-201ENST00000516168 107 ntBASIC1.83□□□□□ -2.12
PRPHP41219 SNORA25.15-201ENST00000516487 89 ntBASIC1.83□□□□□ -2.12
PRPHP41219 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.83□□□□□ -2.12
PRPHP41219 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.83□□□□□ -2.12
PRPHP41219 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.83□□□□□ -2.12
PRPHP41219 MTND2P7-201ENST00000521337 640 ntBASIC1.83□□□□□ -2.12
PRPHP41219 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.83□□□□□ -2.12
PRPHP41219 AP003461.1-201ENST00000528866 78 ntBASIC1.83□□□□□ -2.12
PRPHP41219 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
PRPHP41219 TMF1P1-201ENST00000576058 373 ntBASIC1.83□□□□□ -2.12
PRPHP41219 AC091135.1-201ENST00000585943 307 ntBASIC1.83□□□□□ -2.12
PRPHP41219 AC008751.2-201ENST00000597885 980 ntBASIC1.83□□□□□ -2.12
PRPHP41219 AL136363.2-201ENST00000604173 851 ntBASIC1.83□□□□□ -2.12
PRPHP41219 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.83□□□□□ -2.12
PRPHP41219 AC019226.2-201ENST00000625973 424 ntBASIC1.83□□□□□ -2.12
PRPHP41219 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
PRPHP41219 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
PRPHP41219 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
PRPHP41219 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
PRPHP41219 MIR126-201ENST00000362291 85 ntBASIC1.82□□□□□ -2.12
PRPHP41219 RNU6-584P-201ENST00000410350 95 ntBASIC1.82□□□□□ -2.12
PRPHP41219 C1DP2-201ENST00000418167 426 ntBASIC1.82□□□□□ -2.12
PRPHP41219 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.82□□□□□ -2.12
PRPHP41219 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.82□□□□□ -2.12
PRPHP41219 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.82□□□□□ -2.12
PRPHP41219 CBX3P6-201ENST00000430257 527 ntBASIC1.82□□□□□ -2.12
PRPHP41219 AC000111.3-201ENST00000433478 193 ntBASIC1.82□□□□□ -2.12
PRPHP41219 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.82□□□□□ -2.12
PRPHP41219 AC007969.2-201ENST00000441891 191 ntBASIC1.82□□□□□ -2.12
PRPHP41219 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.82□□□□□ -2.12
PRPHP41219 AC009646.1-201ENST00000510455 318 ntBASIC1.82□□□□□ -2.12
PRPHP41219 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.82□□□□□ -2.12
PRPHP41219 AP005435.4-201ENST00000529514 284 ntBASIC1.82□□□□□ -2.12
PRPHP41219 AL356057.1-201ENST00000533798 831 ntBASIC1.82□□□□□ -2.12
PRPHP41219 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.82□□□□□ -2.12
PRPHP41219 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.82□□□□□ -2.12
PRPHP41219 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.82□□□□□ -2.12
PRPHP41219 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
PRPHP41219 MIR5692A1-201ENST00000580523 69 ntBASIC1.82□□□□□ -2.12
PRPHP41219 AC068944.2-201ENST00000610373 403 ntBASIC1.82□□□□□ -2.12
PRPHP41219 AL359740.1-201ENST00000624340 592 ntBASIC1.82□□□□□ -2.12
PRPHP41219 WWP1P1-201ENST00000466609 2769 ntBASIC1.81□□□□□ -2.12
PRPHP41219 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.81□□□□□ -2.12
PRPHP41219 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.81□□□□□ -2.12
PRPHP41219 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.81□□□□□ -2.12
PRPHP41219 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.81□□□□□ -2.12
PRPHP41219 MTND2P33-201ENST00000506452 1031 ntBASIC1.81□□□□□ -2.12
PRPHP41219 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.81□□□□□ -2.12
PRPHP41219 AC022616.3-201ENST00000523940 148 ntBASIC1.81□□□□□ -2.12
PRPHP41219 AP002453.2-201ENST00000533503 320 ntBASIC1.81□□□□□ -2.12
PRPHP41219 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.81□□□□□ -2.12
PRPHP41219 AC137800.2-201ENST00000574375 120 ntBASIC1.81□□□□□ -2.12
PRPHP41219 AL451064.1-201ENST00000607718 471 ntBASIC1.81□□□□□ -2.12
PRPHP41219 AP000240.1-201ENST00000609910 452 ntBASIC1.81□□□□□ -2.12
PRPHP41219 RMST_4.1-201ENST00000616886 107 ntBASIC1.81□□□□□ -2.12
PRPHP41219 AC131159.1-201ENST00000621854 213 ntBASIC1.81□□□□□ -2.12
PRPHP41219 AC241585.2-209ENST00000638217 143 ntBASIC1.81□□□□□ -2.12
PRPHP41219 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.81□□□□□ -2.12
PRPHP41219 MIR30A-201ENST00000385092 71 ntBASIC1.8□□□□□ -2.12
PRPHP41219 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
PRPHP41219 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.8□□□□□ -2.12
PRPHP41219 HMGN2P23-201ENST00000456759 269 ntBASIC1.8□□□□□ -2.12
PRPHP41219 MTND3P25-201ENST00000509243 135 ntBASIC1.8□□□□□ -2.12
PRPHP41219 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.8□□□□□ -2.12
PRPHP41219 RNU6-970P-201ENST00000516312 107 ntBASIC1.8□□□□□ -2.12
PRPHP41219 RNU6-1220P-201ENST00000517126 108 ntBASIC1.8□□□□□ -2.12
PRPHP41219 SCARNA1-201ENST00000517138 166 ntBASIC1.8□□□□□ -2.12
PRPHP41219 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.8□□□□□ -2.12
PRPHP41219 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.8□□□□□ -2.12
PRPHP41219 AC073539.2-201ENST00000597113 165 ntBASIC1.8□□□□□ -2.12
PRPHP41219 AC112191.3-201ENST00000604371 277 ntBASIC1.8□□□□□ -2.12
PRPHP41219 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.8□□□□□ -2.12
PRPHP41219 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.8□□□□□ -2.12
PRPHP41219 AC099654.13-201ENST00000639774 207 ntBASIC1.8□□□□□ -2.12
PRPHP41219 RNU5F-7P-201ENST00000363696 115 ntBASIC1.79□□□□□ -2.12
PRPHP41219 RNU5E-7P-201ENST00000365290 117 ntBASIC1.79□□□□□ -2.12
PRPHP41219 RNU5E-5P-201ENST00000365379 116 ntBASIC1.79□□□□□ -2.12
PRPHP41219 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
PRPHP41219 SNORA48.1-201ENST00000390879 135 ntBASIC1.79□□□□□ -2.12
PRPHP41219 RPL23AP32-201ENST00000395315 459 ntBASIC1.79□□□□□ -2.12
PRPHP41219 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.79□□□□□ -2.12
PRPHP41219 KATNBL1P3-201ENST00000443475 909 ntBASIC1.79□□□□□ -2.12
PRPHP41219 USP9YP12-201ENST00000450481 570 ntBASIC1.79□□□□□ -2.12
PRPHP41219 AMD1P1-201ENST00000457220 922 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms