Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.27□□□□□ -1.73
PDE6BP35913 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
PDE6BP35913 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.27□□□□□ -1.73
PDE6BP35913 AC244205.2-202ENST00000635781 342 ntBASIC4.27□□□□□ -1.73
PDE6BP35913 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.27□□□□□ -1.73
PDE6BP35913 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
PDE6BP35913 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
PDE6BP35913 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PDE6BP35913 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
PDE6BP35913 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
PDE6BP35913 RNU6-708P-201ENST00000384217 107 ntBASIC4.26□□□□□ -1.73
PDE6BP35913 RNU6-817P-201ENST00000391083 104 ntBASIC4.26□□□□□ -1.73
PDE6BP35913 AL357075.1-201ENST00000404107 726 ntBASIC4.26□□□□□ -1.73
PDE6BP35913 AL591034.1-201ENST00000407447 340 ntBASIC4.26□□□□□ -1.73
PDE6BP35913 RNU6-1203P-201ENST00000410703 110 ntBASIC4.26□□□□□ -1.73
PDE6BP35913 RNU6-607P-201ENST00000411283 108 ntBASIC4.26□□□□□ -1.73
PDE6BP35913 AC017079.2-201ENST00000416102 485 ntBASIC4.26□□□□□ -1.73
PDE6BP35913 SSXP9-201ENST00000417503 292 ntBASIC4.26□□□□□ -1.73
PDE6BP35913 RPEP5-201ENST00000441137 268 ntBASIC4.26□□□□□ -1.73
PDE6BP35913 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.26□□□□□ -1.73
PDE6BP35913 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PDE6BP35913 SNORA70.16-201ENST00000516390 95 ntBASIC4.26□□□□□ -1.73
PDE6BP35913 SCARNA15.2-201ENST00000516409 127 ntBASIC4.26□□□□□ -1.73
PDE6BP35913 AC034114.1-201ENST00000520293 285 ntBASIC4.26□□□□□ -1.73
PDE6BP35913 AC004024.1-201ENST00000549244 247 ntBASIC4.26□□□□□ -1.73
PDE6BP35913 TRAV32-201ENST00000553993 340 ntBASIC4.26□□□□□ -1.73
PDE6BP35913 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.26□□□□□ -1.73
PDE6BP35913 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.26□□□□□ -1.73
PDE6BP35913 MIR5701-3-201ENST00000578890 82 ntBASIC4.26□□□□□ -1.73
PDE6BP35913 CPDP1-201ENST00000579660 283 ntBASIC4.26□□□□□ -1.73
PDE6BP35913 MIR3910-1-201ENST00000580936 111 ntBASIC4.26□□□□□ -1.73
PDE6BP35913 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.26□□□□□ -1.73
PDE6BP35913 MIR5701-1-201ENST00000585138 82 ntBASIC4.26□□□□□ -1.73
PDE6BP35913 AC004792.1-201ENST00000614523 137 ntBASIC4.26□□□□□ -1.73
PDE6BP35913 MIR5701-2-201ENST00000615634 82 ntBASIC4.26□□□□□ -1.73
PDE6BP35913 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.26□□□□□ -1.73
PDE6BP35913 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.26□□□□□ -1.73
PDE6BP35913 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PDE6BP35913 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PDE6BP35913 RNU6-212P-201ENST00000362642 104 ntBASIC4.25□□□□□ -1.73
PDE6BP35913 Y_RNA.84-201ENST00000363011 104 ntBASIC4.25□□□□□ -1.73
PDE6BP35913 SNORA80A-201ENST00000363922 136 ntBASIC4.25□□□□□ -1.73
PDE6BP35913 RNY1-201ENST00000364228 113 ntBASIC4.25□□□□□ -1.73
PDE6BP35913 Y_RNA.526-201ENST00000384572 110 ntBASIC4.25□□□□□ -1.73
PDE6BP35913 Y_RNA.533-201ENST00000384596 114 ntBASIC4.25□□□□□ -1.73
PDE6BP35913 Y_RNA.534-201ENST00000384599 112 ntBASIC4.25□□□□□ -1.73
PDE6BP35913 Z98941.1-201ENST00000407764 100 ntBASIC4.25□□□□□ -1.73
PDE6BP35913 RNU2-25P-201ENST00000411041 191 ntBASIC4.25□□□□□ -1.73
PDE6BP35913 MTATP6P29-201ENST00000415057 132 ntBASIC4.25□□□□□ -1.73
PDE6BP35913 MTCO3P19-201ENST00000415864 321 ntBASIC4.25□□□□□ -1.73
PDE6BP35913 EIF4EP2-201ENST00000422816 654 ntBASIC4.25□□□□□ -1.73
PDE6BP35913 AC004383.1-201ENST00000438135 289 ntBASIC4.25□□□□□ -1.73
PDE6BP35913 RPS29P31-201ENST00000446147 164 ntBASIC4.25□□□□□ -1.73
PDE6BP35913 AL139109.1-201ENST00000455491 297 ntBASIC4.25□□□□□ -1.73
PDE6BP35913 RPL37P6-201ENST00000460682 294 ntBASIC4.25□□□□□ -1.73
PDE6BP35913 HMGN2P13-201ENST00000476476 274 ntBASIC4.25□□□□□ -1.73
PDE6BP35913 SNORA70.14-201ENST00000516205 110 ntBASIC4.25□□□□□ -1.73
PDE6BP35913 RNU6-914P-201ENST00000516749 109 ntBASIC4.25□□□□□ -1.73
PDE6BP35913 AC069113.1-201ENST00000517763 267 ntBASIC4.25□□□□□ -1.73
PDE6BP35913 HMGB1P14-201ENST00000557424 591 ntBASIC4.25□□□□□ -1.73
PDE6BP35913 AL390123.1-201ENST00000603216 237 ntBASIC4.25□□□□□ -1.73
PDE6BP35913 BRDTP1-201ENST00000605735 677 ntBASIC4.25□□□□□ -1.73
PDE6BP35913 MIR3976-201ENST00000606807 139 ntBASIC4.25□□□□□ -1.73
PDE6BP35913 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.25□□□□□ -1.73
PDE6BP35913 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
PDE6BP35913 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
PDE6BP35913 AP000560.1-201ENST00000624150 1937 ntBASIC4.25□□□□□ -1.73
PDE6BP35913 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
PDE6BP35913 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.24□□□□□ -1.73
PDE6BP35913 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDE6BP35913 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDE6BP35913 Y_RNA.183-201ENST00000363882 113 ntBASIC4.24□□□□□ -1.73
PDE6BP35913 RNU6-746P-201ENST00000384112 109 ntBASIC4.24□□□□□ -1.73
PDE6BP35913 RNU6-187P-201ENST00000384139 106 ntBASIC4.24□□□□□ -1.73
PDE6BP35913 SNORA36C-201ENST00000384289 132 ntBASIC4.24□□□□□ -1.73
PDE6BP35913 Y_RNA.471-201ENST00000384312 102 ntBASIC4.24□□□□□ -1.73
PDE6BP35913 RNU6-886P-201ENST00000384319 105 ntBASIC4.24□□□□□ -1.73
PDE6BP35913 RNU6-790P-201ENST00000384479 105 ntBASIC4.24□□□□□ -1.73
PDE6BP35913 MIR215-201ENST00000384858 110 ntBASIC4.24□□□□□ -1.73
PDE6BP35913 MIR625-201ENST00000385047 85 ntBASIC4.24□□□□□ -1.73
PDE6BP35913 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.24□□□□□ -1.73
PDE6BP35913 AC079780.1-201ENST00000428259 207 ntBASIC4.24□□□□□ -1.73
PDE6BP35913 MYL8P-204ENST00000431574 518 ntBASIC4.24□□□□□ -1.73
PDE6BP35913 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.24□□□□□ -1.73
PDE6BP35913 RPL7P47-201ENST00000497299 556 ntBASIC4.24□□□□□ -1.73
PDE6BP35913 AC097462.2-201ENST00000504623 481 ntBASIC4.24□□□□□ -1.73
PDE6BP35913 OR4H12P-201ENST00000556269 907 ntBASIC4.24□□□□□ -1.73
PDE6BP35913 AC004584.2-201ENST00000570407 410 ntBASIC4.24□□□□□ -1.73
PDE6BP35913 MIR4273-201ENST00000582824 84 ntBASIC4.24□□□□□ -1.73
PDE6BP35913 OR1M4P-201ENST00000589199 287 ntBASIC4.24□□□□□ -1.73
PDE6BP35913 AC073410.2-201ENST00000603240 332 ntBASIC4.24□□□□□ -1.73
PDE6BP35913 AC123912.5-201ENST00000605470 343 ntBASIC4.24□□□□□ -1.73
PDE6BP35913 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.24□□□□□ -1.73
PDE6BP35913 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.24□□□□□ -1.73
PDE6BP35913 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.24□□□□□ -1.73
PDE6BP35913 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDE6BP35913 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.24□□□□□ -1.73
PDE6BP35913 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PDE6BP35913 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PDE6BP35913 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms