Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 SNORD3E-201ENST00000362899 217 ntBASIC0.9□□□□□ -2.27
RPS4Y1P22090 RNU6-511P-201ENST00000363496 107 ntBASIC0.9□□□□□ -2.27
RPS4Y1P22090 SNORD114-6-201ENST00000364393 72 ntBASIC0.9□□□□□ -2.27
RPS4Y1P22090 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.9□□□□□ -2.27
RPS4Y1P22090 RPL37P10-201ENST00000412884 288 ntBASIC0.9□□□□□ -2.27
RPS4Y1P22090 RPL21P90-201ENST00000415692 466 ntBASIC0.9□□□□□ -2.27
RPS4Y1P22090 AL365400.1-201ENST00000431854 640 ntBASIC0.9□□□□□ -2.27
RPS4Y1P22090 RPS15AP10-201ENST00000432472 382 ntBASIC0.9□□□□□ -2.27
RPS4Y1P22090 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.9□□□□□ -2.27
RPS4Y1P22090 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.9□□□□□ -2.27
RPS4Y1P22090 AL022238.1-201ENST00000442557 355 ntBASIC0.9□□□□□ -2.27
RPS4Y1P22090 AC093899.1-201ENST00000457984 376 ntBASIC0.9□□□□□ -2.27
RPS4Y1P22090 snoU109.2-201ENST00000459316 135 ntBASIC0.9□□□□□ -2.27
RPS4Y1P22090 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.9□□□□□ -2.27
RPS4Y1P22090 AC119751.4-201ENST00000507498 357 ntBASIC0.9□□□□□ -2.27
RPS4Y1P22090 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.9□□□□□ -2.27
RPS4Y1P22090 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.9□□□□□ -2.27
RPS4Y1P22090 TRAV32-201ENST00000553993 340 ntBASIC0.9□□□□□ -2.27
RPS4Y1P22090 MIR544B-201ENST00000582372 78 ntBASIC0.9□□□□□ -2.27
RPS4Y1P22090 KC877982.1-201ENST00000602313 470 ntBASIC0.9□□□□□ -2.27
RPS4Y1P22090 AC080078.3-201ENST00000605407 463 ntBASIC0.9□□□□□ -2.27
RPS4Y1P22090 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.9□□□□□ -2.27
RPS4Y1P22090 AL355816.2-201ENST00000610049 647 ntBASIC0.9□□□□□ -2.27
RPS4Y1P22090 RNU6-1192P-201ENST00000612197 107 ntBASIC0.9□□□□□ -2.27
RPS4Y1P22090 AL590240.4-201ENST00000616908 390 ntBASIC0.9□□□□□ -2.27
RPS4Y1P22090 RNU6-489P-201ENST00000618289 107 ntBASIC0.9□□□□□ -2.27
RPS4Y1P22090 AC008993.2-201ENST00000631744 806 ntBASIC0.9□□□□□ -2.27
RPS4Y1P22090 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.9□□□□□ -2.27
RPS4Y1P22090 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.9□□□□□ -2.27
RPS4Y1P22090 RNU6-212P-201ENST00000362642 104 ntBASIC0.89□□□□□ -2.27
RPS4Y1P22090 RNU6-112P-201ENST00000363599 104 ntBASIC0.89□□□□□ -2.27
RPS4Y1P22090 RNU5E-6P-201ENST00000365574 115 ntBASIC0.89□□□□□ -2.27
RPS4Y1P22090 SNORD116-20-201ENST00000384529 92 ntBASIC0.89□□□□□ -2.27
RPS4Y1P22090 RNU6-160P-201ENST00000384591 107 ntBASIC0.89□□□□□ -2.27
RPS4Y1P22090 Y_RNA.597-201ENST00000410463 100 ntBASIC0.89□□□□□ -2.27
RPS4Y1P22090 RNU2-72P-201ENST00000411175 163 ntBASIC0.89□□□□□ -2.27
RPS4Y1P22090 ELOCP17-201ENST00000414751 326 ntBASIC0.89□□□□□ -2.27
RPS4Y1P22090 ELOCP9-201ENST00000418624 239 ntBASIC0.89□□□□□ -2.27
RPS4Y1P22090 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.89□□□□□ -2.27
RPS4Y1P22090 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.89□□□□□ -2.27
RPS4Y1P22090 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.89□□□□□ -2.27
RPS4Y1P22090 CBX3P6-201ENST00000430257 527 ntBASIC0.89□□□□□ -2.27
RPS4Y1P22090 AL627311.1-201ENST00000431514 115 ntBASIC0.89□□□□□ -2.27
RPS4Y1P22090 USP9YP17-201ENST00000444617 696 ntBASIC0.89□□□□□ -2.27
RPS4Y1P22090 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
RPS4Y1P22090 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.89□□□□□ -2.27
RPS4Y1P22090 AC009646.1-201ENST00000510455 318 ntBASIC0.89□□□□□ -2.27
RPS4Y1P22090 AC116353.3-201ENST00000511215 249 ntBASIC0.89□□□□□ -2.27
RPS4Y1P22090 RNU6-1092P-201ENST00000516955 87 ntBASIC0.89□□□□□ -2.27
RPS4Y1P22090 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.89□□□□□ -2.27
RPS4Y1P22090 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
RPS4Y1P22090 AC090115.3-201ENST00000553218 849 ntBASIC0.89□□□□□ -2.27
RPS4Y1P22090 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.89□□□□□ -2.27
RPS4Y1P22090 AC137800.2-201ENST00000574375 120 ntBASIC0.89□□□□□ -2.27
RPS4Y1P22090 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.89□□□□□ -2.27
RPS4Y1P22090 AL606834.3-201ENST00000602615 496 ntBASIC0.89□□□□□ -2.27
RPS4Y1P22090 AC174048.1-201ENST00000603389 144 ntBASIC0.89□□□□□ -2.27
RPS4Y1P22090 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.89□□□□□ -2.27
RPS4Y1P22090 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
RPS4Y1P22090 MIR412-201ENST00000362142 91 ntBASIC0.88□□□□□ -2.27
RPS4Y1P22090 RNY3P13-201ENST00000365542 102 ntBASIC0.88□□□□□ -2.27
RPS4Y1P22090 SNORD116-12-201ENST00000384468 92 ntBASIC0.88□□□□□ -2.27
RPS4Y1P22090 AP000275.1-201ENST00000411943 390 ntBASIC0.88□□□□□ -2.27
RPS4Y1P22090 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.88□□□□□ -2.27
RPS4Y1P22090 RPS27P16-201ENST00000425758 201 ntBASIC0.88□□□□□ -2.27
RPS4Y1P22090 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.88□□□□□ -2.27
RPS4Y1P22090 NDUFB1P2-201ENST00000449477 176 ntBASIC0.88□□□□□ -2.27
RPS4Y1P22090 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.88□□□□□ -2.27
RPS4Y1P22090 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.88□□□□□ -2.27
RPS4Y1P22090 RPL30P7-201ENST00000479312 323 ntBASIC0.88□□□□□ -2.27
RPS4Y1P22090 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.88□□□□□ -2.27
RPS4Y1P22090 HMGN1P13-201ENST00000505795 138 ntBASIC0.88□□□□□ -2.27
RPS4Y1P22090 RNU7-40P-201ENST00000516397 64 ntBASIC0.88□□□□□ -2.27
RPS4Y1P22090 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.88□□□□□ -2.27
RPS4Y1P22090 AC005786.1-201ENST00000588553 154 ntBASIC0.88□□□□□ -2.27
RPS4Y1P22090 AL138889.2-201ENST00000603883 242 ntBASIC0.88□□□□□ -2.27
RPS4Y1P22090 AP000860.1-201ENST00000605250 559 ntBASIC0.88□□□□□ -2.27
RPS4Y1P22090 RNU6-88P-201ENST00000606801 100 ntBASIC0.88□□□□□ -2.27
RPS4Y1P22090 AL158211.2-201ENST00000607282 395 ntBASIC0.88□□□□□ -2.27
RPS4Y1P22090 AC072039.2-201ENST00000608883 439 ntBASIC0.88□□□□□ -2.27
RPS4Y1P22090 AL078604.3-201ENST00000615580 211 ntBASIC0.88□□□□□ -2.27
RPS4Y1P22090 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.88□□□□□ -2.27
RPS4Y1P22090 AC068205.3-201ENST00000636385 468 ntBASIC0.88□□□□□ -2.27
RPS4Y1P22090 AC092104.1-201ENST00000497346 1441 ntBASIC0.88□□□□□ -2.27
RPS4Y1P22090 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.87□□□□□ -2.27
RPS4Y1P22090 AC245060.5-201ENST00000610778 3293 ntBASIC0.87□□□□□ -2.27
RPS4Y1P22090 AC233981.2-201ENST00000611524 1614 ntBASIC0.87□□□□□ -2.27
RPS4Y1P22090 SNORD1A-201ENST00000364968 72 ntBASIC0.87□□□□□ -2.27
RPS4Y1P22090 RNU6-946P-201ENST00000383878 107 ntBASIC0.87□□□□□ -2.27
RPS4Y1P22090 RNU6-190P-201ENST00000384154 102 ntBASIC0.87□□□□□ -2.27
RPS4Y1P22090 RNU6-296P-201ENST00000384608 107 ntBASIC0.87□□□□□ -2.27
RPS4Y1P22090 RNU6-1257P-201ENST00000384625 110 ntBASIC0.87□□□□□ -2.27
RPS4Y1P22090 AL136310.1-201ENST00000404926 654 ntBASIC0.87□□□□□ -2.27
RPS4Y1P22090 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.87□□□□□ -2.27
RPS4Y1P22090 MTCYBP5-201ENST00000423752 1135 ntBASIC0.87□□□□□ -2.27
RPS4Y1P22090 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.87□□□□□ -2.27
RPS4Y1P22090 AC244505.5-201ENST00000443639 207 ntBASIC0.87□□□□□ -2.27
RPS4Y1P22090 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.87□□□□□ -2.27
RPS4Y1P22090 AC130509.1-201ENST00000464158 433 ntBASIC0.87□□□□□ -2.27
RPS4Y1P22090 HMGN1P7-201ENST00000491722 313 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms