Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.37□□□□□ -1.71
LMNB1P20700 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.37□□□□□ -1.71
LMNB1P20700 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LMNB1P20700 AC008011.1-201ENST00000545989 227 ntBASIC4.37□□□□□ -1.71
LMNB1P20700 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.37□□□□□ -1.71
LMNB1P20700 MIR3128-201ENST00000581957 66 ntBASIC4.37□□□□□ -1.71
LMNB1P20700 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.37□□□□□ -1.71
LMNB1P20700 AC097372.5-201ENST00000623665 376 ntBASIC4.37□□□□□ -1.71
LMNB1P20700 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.37□□□□□ -1.71
LMNB1P20700 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
LMNB1P20700 MAPK10-373ENST00000641983 6772 ntBASIC4.36□□□□□ -1.71
LMNB1P20700 AC018555.1-201ENST00000567548 1980 ntBASIC4.36□□□□□ -1.71
LMNB1P20700 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LMNB1P20700 Y_RNA.60-201ENST00000362831 98 ntBASIC4.36□□□□□ -1.71
LMNB1P20700 RNU6-105P-201ENST00000363909 104 ntBASIC4.36□□□□□ -1.71
LMNB1P20700 Y_RNA.405-201ENST00000383979 100 ntBASIC4.36□□□□□ -1.71
LMNB1P20700 Y_RNA.451-201ENST00000384200 100 ntBASIC4.36□□□□□ -1.71
LMNB1P20700 Y_RNA.489-201ENST00000384410 101 ntBASIC4.36□□□□□ -1.71
LMNB1P20700 Y_RNA.524-201ENST00000384564 100 ntBASIC4.36□□□□□ -1.71
LMNB1P20700 Y_RNA.526-201ENST00000384572 110 ntBASIC4.36□□□□□ -1.71
LMNB1P20700 Y_RNA.561-201ENST00000384694 100 ntBASIC4.36□□□□□ -1.71
LMNB1P20700 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.36□□□□□ -1.71
LMNB1P20700 Z82188.1-201ENST00000436709 154 ntBASIC4.36□□□□□ -1.71
LMNB1P20700 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.36□□□□□ -1.71
LMNB1P20700 U3.44-201ENST00000458938 192 ntBASIC4.36□□□□□ -1.71
LMNB1P20700 U8.22-201ENST00000459141 133 ntBASIC4.36□□□□□ -1.71
LMNB1P20700 AC010469.2-201ENST00000496412 480 ntBASIC4.36□□□□□ -1.71
LMNB1P20700 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.36□□□□□ -1.71
LMNB1P20700 RNA5SP341-201ENST00000516261 117 ntBASIC4.36□□□□□ -1.71
LMNB1P20700 SNORA31.18-201ENST00000517043 134 ntBASIC4.36□□□□□ -1.71
LMNB1P20700 RNU6-570P-201ENST00000517051 105 ntBASIC4.36□□□□□ -1.71
LMNB1P20700 AC060766.3-201ENST00000591442 263 ntBASIC4.36□□□□□ -1.71
LMNB1P20700 RPS29P30-201ENST00000600975 111 ntBASIC4.36□□□□□ -1.71
LMNB1P20700 AC008962.1-201ENST00000605729 304 ntBASIC4.36□□□□□ -1.71
LMNB1P20700 FTX_3.1-201ENST00000610451 147 ntBASIC4.36□□□□□ -1.71
LMNB1P20700 AC130454.1-201ENST00000622948 401 ntBASIC4.36□□□□□ -1.71
LMNB1P20700 AP001148.1-201ENST00000624124 2359 ntBASIC4.36□□□□□ -1.71
LMNB1P20700 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LMNB1P20700 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LMNB1P20700 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LMNB1P20700 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.35□□□□□ -1.71
LMNB1P20700 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LMNB1P20700 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LMNB1P20700 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.35□□□□□ -1.71
LMNB1P20700 Y_RNA.14-201ENST00000362415 103 ntBASIC4.35□□□□□ -1.71
LMNB1P20700 RNU6-778P-201ENST00000363269 103 ntBASIC4.35□□□□□ -1.71
LMNB1P20700 Y_RNA.350-201ENST00000365409 98 ntBASIC4.35□□□□□ -1.71
LMNB1P20700 Y_RNA.358-201ENST00000365491 99 ntBASIC4.35□□□□□ -1.71
LMNB1P20700 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LMNB1P20700 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LMNB1P20700 RNU6-217P-201ENST00000384164 104 ntBASIC4.35□□□□□ -1.71
LMNB1P20700 Y_RNA.477-201ENST00000384352 108 ntBASIC4.35□□□□□ -1.71
LMNB1P20700 MIR190B-201ENST00000401119 79 ntBASIC4.35□□□□□ -1.71
LMNB1P20700 RNU2-71P-201ENST00000411395 189 ntBASIC4.35□□□□□ -1.71
LMNB1P20700 MTCO3P19-201ENST00000415864 321 ntBASIC4.35□□□□□ -1.71
LMNB1P20700 AL356968.1-201ENST00000416622 474 ntBASIC4.35□□□□□ -1.71
LMNB1P20700 RPL23AP22-201ENST00000437556 453 ntBASIC4.35□□□□□ -1.71
LMNB1P20700 AC098831.1-201ENST00000440661 216 ntBASIC4.35□□□□□ -1.71
LMNB1P20700 AC098869.1-201ENST00000481627 292 ntBASIC4.35□□□□□ -1.71
LMNB1P20700 RPL7P47-201ENST00000497299 556 ntBASIC4.35□□□□□ -1.71
LMNB1P20700 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.35□□□□□ -1.71
LMNB1P20700 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.35□□□□□ -1.71
LMNB1P20700 SNORA40.15-201ENST00000516884 107 ntBASIC4.35□□□□□ -1.71
LMNB1P20700 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.35□□□□□ -1.71
LMNB1P20700 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.35□□□□□ -1.71
LMNB1P20700 MIR4782-201ENST00000577987 79 ntBASIC4.35□□□□□ -1.71
LMNB1P20700 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
LMNB1P20700 AC118273.1-201ENST00000525324 3006 ntBASIC4.35□□□□□ -1.71
LMNB1P20700 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LMNB1P20700 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LMNB1P20700 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LMNB1P20700 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
LMNB1P20700 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LMNB1P20700 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LMNB1P20700 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
LMNB1P20700 OR56A5-201ENST00000340110 738 ntBASIC4.34□□□□□ -1.71
LMNB1P20700 RNU6-898P-201ENST00000365627 104 ntBASIC4.34□□□□□ -1.71
LMNB1P20700 RNU6-658P-201ENST00000384606 106 ntBASIC4.34□□□□□ -1.71
LMNB1P20700 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.34□□□□□ -1.71
LMNB1P20700 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.34□□□□□ -1.71
LMNB1P20700 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.34□□□□□ -1.71
LMNB1P20700 RPL21P104-201ENST00000464143 478 ntBASIC4.34□□□□□ -1.71
LMNB1P20700 SNRPGP3-201ENST00000469405 227 ntBASIC4.34□□□□□ -1.71
LMNB1P20700 RPL30P5-201ENST00000494923 336 ntBASIC4.34□□□□□ -1.71
LMNB1P20700 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.34□□□□□ -1.71
LMNB1P20700 SNORA43.2-201ENST00000516652 128 ntBASIC4.34□□□□□ -1.71
LMNB1P20700 AP003733.2-201ENST00000529409 171 ntBASIC4.34□□□□□ -1.71
LMNB1P20700 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
LMNB1P20700 MRPS36P4-201ENST00000534436 298 ntBASIC4.34□□□□□ -1.71
LMNB1P20700 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.34□□□□□ -1.71
LMNB1P20700 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.34□□□□□ -1.71
LMNB1P20700 AC090877.1-201ENST00000561418 344 ntBASIC4.34□□□□□ -1.71
LMNB1P20700 MIR3690-201ENST00000580266 75 ntBASIC4.34□□□□□ -1.71
LMNB1P20700 MIR4672-201ENST00000583126 81 ntBASIC4.34□□□□□ -1.71
LMNB1P20700 AC096772.1-201ENST00000609146 564 ntBASIC4.34□□□□□ -1.71
LMNB1P20700 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.34□□□□□ -1.71
LMNB1P20700 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.34□□□□□ -1.71
LMNB1P20700 U4.6-201ENST00000621618 127 ntBASIC4.34□□□□□ -1.71
LMNB1P20700 AC027309.3-201ENST00000623419 351 ntBASIC4.34□□□□□ -1.71
LMNB1P20700 SCARNA4-202ENST00000625402 129 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms