Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 RN7SKP83-201ENST00000516512 178 ntBASIC4.37□□□□□ -1.71
LIG1P18858 RNU6-1212P-201ENST00000517023 104 ntBASIC4.37□□□□□ -1.71
LIG1P18858 RNA5SP165-201ENST00000517142 115 ntBASIC4.37□□□□□ -1.71
LIG1P18858 RNA5SP291-201ENST00000517222 105 ntBASIC4.37□□□□□ -1.71
LIG1P18858 MIR4643-201ENST00000577473 78 ntBASIC4.37□□□□□ -1.71
LIG1P18858 AL137849.1-201ENST00000604767 169 ntBASIC4.37□□□□□ -1.71
LIG1P18858 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.37□□□□□ -1.71
LIG1P18858 AP002826.1-201ENST00000608835 315 ntBASIC4.37□□□□□ -1.71
LIG1P18858 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.37□□□□□ -1.71
LIG1P18858 AC027309.3-201ENST00000623419 351 ntBASIC4.37□□□□□ -1.71
LIG1P18858 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.37□□□□□ -1.71
LIG1P18858 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.37□□□□□ -1.71
LIG1P18858 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
LIG1P18858 AC073073.2-201ENST00000609827 2578 ntBASIC4.37□□□□□ -1.71
LIG1P18858 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
LIG1P18858 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
LIG1P18858 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LIG1P18858 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LIG1P18858 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LIG1P18858 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LIG1P18858 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LIG1P18858 RNU6-1301P-201ENST00000362724 104 ntBASIC4.36□□□□□ -1.71
LIG1P18858 Y_RNA.83-201ENST00000363005 113 ntBASIC4.36□□□□□ -1.71
LIG1P18858 SNORD113-8-201ENST00000363497 74 ntBASIC4.36□□□□□ -1.71
LIG1P18858 RNU1-64P-201ENST00000365443 163 ntBASIC4.36□□□□□ -1.71
LIG1P18858 SNORD63-201ENST00000384262 68 ntBASIC4.36□□□□□ -1.71
LIG1P18858 BTF3L4P2-201ENST00000392798 346 ntBASIC4.36□□□□□ -1.71
LIG1P18858 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.36□□□□□ -1.71
LIG1P18858 snoU13.30-201ENST00000458951 104 ntBASIC4.36□□□□□ -1.71
LIG1P18858 RNU6-496P-201ENST00000516145 99 ntBASIC4.36□□□□□ -1.71
LIG1P18858 SCARNA24.2-201ENST00000516968 130 ntBASIC4.36□□□□□ -1.71
LIG1P18858 SNORA31.18-201ENST00000517043 134 ntBASIC4.36□□□□□ -1.71
LIG1P18858 CBX3P4-201ENST00000538909 354 ntBASIC4.36□□□□□ -1.71
LIG1P18858 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.36□□□□□ -1.71
LIG1P18858 MIR3186-201ENST00000577404 85 ntBASIC4.36□□□□□ -1.71
LIG1P18858 MIR3910-1-201ENST00000580936 111 ntBASIC4.36□□□□□ -1.71
LIG1P18858 U2.14-201ENST00000615943 113 ntBASIC4.36□□□□□ -1.71
LIG1P18858 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LIG1P18858 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LIG1P18858 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
LIG1P18858 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
LIG1P18858 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.35□□□□□ -1.71
LIG1P18858 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
LIG1P18858 RNU6-545P-201ENST00000362681 104 ntBASIC4.35□□□□□ -1.71
LIG1P18858 RNU6-78P-201ENST00000362897 107 ntBASIC4.35□□□□□ -1.71
LIG1P18858 RNU6-72P-201ENST00000384285 79 ntBASIC4.35□□□□□ -1.71
LIG1P18858 RNU6-378P-201ENST00000384324 107 ntBASIC4.35□□□□□ -1.71
LIG1P18858 MIR199A2-201ENST00000385289 110 ntBASIC4.35□□□□□ -1.71
LIG1P18858 RNU2-68P-201ENST00000410878 191 ntBASIC4.35□□□□□ -1.71
LIG1P18858 Y_RNA.793-201ENST00000411222 111 ntBASIC4.35□□□□□ -1.71
LIG1P18858 YPEL5P1-201ENST00000419731 367 ntBASIC4.35□□□□□ -1.71
LIG1P18858 AL358453.1-201ENST00000422522 250 ntBASIC4.35□□□□□ -1.71
LIG1P18858 AP000907.1-201ENST00000428428 510 ntBASIC4.35□□□□□ -1.71
LIG1P18858 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.35□□□□□ -1.71
LIG1P18858 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.35□□□□□ -1.71
LIG1P18858 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.35□□□□□ -1.71
LIG1P18858 KC877373.1-201ENST00000479066 408 ntBASIC4.35□□□□□ -1.71
LIG1P18858 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.35□□□□□ -1.71
LIG1P18858 SERF1AP1-201ENST00000514575 187 ntBASIC4.35□□□□□ -1.71
LIG1P18858 AP006245.1-201ENST00000522549 120 ntBASIC4.35□□□□□ -1.71
LIG1P18858 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.35□□□□□ -1.71
LIG1P18858 MIR4659A-201ENST00000580269 81 ntBASIC4.35□□□□□ -1.71
LIG1P18858 AC092628.2-201ENST00000622492 339 ntBASIC4.35□□□□□ -1.71
LIG1P18858 SCARNA4-202ENST00000625402 129 ntBASIC4.35□□□□□ -1.71
LIG1P18858 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
LIG1P18858 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.35□□□□□ -1.71
LIG1P18858 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
LIG1P18858 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
LIG1P18858 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
LIG1P18858 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
LIG1P18858 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
LIG1P18858 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.34□□□□□ -1.71
LIG1P18858 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.34□□□□□ -1.71
LIG1P18858 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.34□□□□□ -1.71
LIG1P18858 AC002075.2-201ENST00000425207 252 ntBASIC4.34□□□□□ -1.71
LIG1P18858 AL590383.1-201ENST00000428602 75 ntBASIC4.34□□□□□ -1.71
LIG1P18858 snoU109.2-201ENST00000459316 135 ntBASIC4.34□□□□□ -1.71
LIG1P18858 RNU7-120P-201ENST00000459334 63 ntBASIC4.34□□□□□ -1.71
LIG1P18858 RN7SL132P-201ENST00000478131 296 ntBASIC4.34□□□□□ -1.71
LIG1P18858 AC023632.4-201ENST00000517783 191 ntBASIC4.34□□□□□ -1.71
LIG1P18858 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.34□□□□□ -1.71
LIG1P18858 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.34□□□□□ -1.71
LIG1P18858 AC023824.2-201ENST00000566185 400 ntBASIC4.34□□□□□ -1.71
LIG1P18858 AC073657.2-201ENST00000605661 303 ntBASIC4.34□□□□□ -1.71
LIG1P18858 SNORA51-201ENST00000606420 132 ntBASIC4.34□□□□□ -1.71
LIG1P18858 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.34□□□□□ -1.71
LIG1P18858 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
LIG1P18858 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
LIG1P18858 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.33□□□□□ -1.72
LIG1P18858 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.33□□□□□ -1.72
LIG1P18858 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.33□□□□□ -1.72
LIG1P18858 AC233981.2-201ENST00000611524 1614 ntBASIC4.33□□□□□ -1.72
LIG1P18858 RNU6-774P-201ENST00000363238 107 ntBASIC4.33□□□□□ -1.72
LIG1P18858 RNU6-105P-201ENST00000363909 104 ntBASIC4.33□□□□□ -1.72
LIG1P18858 RNA5SP97-201ENST00000365006 84 ntBASIC4.33□□□□□ -1.72
LIG1P18858 RNU6-290P-201ENST00000365212 101 ntBASIC4.33□□□□□ -1.72
LIG1P18858 RNU6-17P-201ENST00000384245 107 ntBASIC4.33□□□□□ -1.72
LIG1P18858 RNU6-937P-201ENST00000384325 106 ntBASIC4.33□□□□□ -1.72
LIG1P18858 RNU6-18P-201ENST00000384527 107 ntBASIC4.33□□□□□ -1.72
LIG1P18858 RNU2-20P-201ENST00000410425 191 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms