Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.68□□□□□ -1.82
ATF4P18848 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.68□□□□□ -1.82
ATF4P18848 AL445305.1-201ENST00000432577 575 ntBASIC3.68□□□□□ -1.82
ATF4P18848 RPL34P20-201ENST00000442771 351 ntBASIC3.68□□□□□ -1.82
ATF4P18848 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.68□□□□□ -1.82
ATF4P18848 AL162591.2-201ENST00000449634 317 ntBASIC3.68□□□□□ -1.82
ATF4P18848 AC140172.1-201ENST00000502928 141 ntBASIC3.68□□□□□ -1.82
ATF4P18848 CYCSP23-201ENST00000519781 313 ntBASIC3.68□□□□□ -1.82
ATF4P18848 AC026470.2-201ENST00000561492 181 ntBASIC3.68□□□□□ -1.82
ATF4P18848 MIR3186-201ENST00000577404 85 ntBASIC3.68□□□□□ -1.82
ATF4P18848 MIR8062-201ENST00000621515 85 ntBASIC3.68□□□□□ -1.82
ATF4P18848 MIR7157-201ENST00000635801 60 ntBASIC3.68□□□□□ -1.82
ATF4P18848 AL021368.2-201ENST00000606125 5352 ntBASIC3.68□□□□□ -1.82
ATF4P18848 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
ATF4P18848 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.68□□□□□ -1.82
ATF4P18848 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
ATF4P18848 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATF4P18848 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
ATF4P18848 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.67□□□□□ -1.82
ATF4P18848 RNA5SP123-201ENST00000363244 119 ntBASIC3.67□□□□□ -1.82
ATF4P18848 Y_RNA.179-201ENST00000363844 90 ntBASIC3.67□□□□□ -1.82
ATF4P18848 RNA5SP428-201ENST00000365129 132 ntBASIC3.67□□□□□ -1.82
ATF4P18848 RNU6-926P-201ENST00000384075 107 ntBASIC3.67□□□□□ -1.82
ATF4P18848 MIR29B2-201ENST00000385055 81 ntBASIC3.67□□□□□ -1.82
ATF4P18848 MIR1302-6-201ENST00000408466 90 ntBASIC3.67□□□□□ -1.82
ATF4P18848 Y_RNA.595-201ENST00000410403 105 ntBASIC3.67□□□□□ -1.82
ATF4P18848 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.67□□□□□ -1.82
ATF4P18848 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.67□□□□□ -1.82
ATF4P18848 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.67□□□□□ -1.82
ATF4P18848 AC073901.1-201ENST00000462471 408 ntBASIC3.67□□□□□ -1.82
ATF4P18848 AC025554.1-201ENST00000505641 188 ntBASIC3.67□□□□□ -1.82
ATF4P18848 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.67□□□□□ -1.82
ATF4P18848 RNU6-1231P-201ENST00000517185 103 ntBASIC3.67□□□□□ -1.82
ATF4P18848 MYL12BP1-201ENST00000569826 507 ntBASIC3.67□□□□□ -1.82
ATF4P18848 MIR5047-201ENST00000579212 100 ntBASIC3.67□□□□□ -1.82
ATF4P18848 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.67□□□□□ -1.82
ATF4P18848 AL133393.1-201ENST00000603277 287 ntBASIC3.67□□□□□ -1.82
ATF4P18848 AL121932.1-201ENST00000605542 214 ntBASIC3.67□□□□□ -1.82
ATF4P18848 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.67□□□□□ -1.82
ATF4P18848 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.67□□□□□ -1.82
ATF4P18848 MFSD8-236ENST00000641509 4050 ntBASIC3.67□□□□□ -1.82
ATF4P18848 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
ATF4P18848 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ATF4P18848 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.66□□□□□ -1.82
ATF4P18848 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ATF4P18848 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.82
ATF4P18848 RNA5SP361-201ENST00000362686 118 ntBASIC3.66□□□□□ -1.82
ATF4P18848 Y_RNA.512-201ENST00000384518 102 ntBASIC3.66□□□□□ -1.82
ATF4P18848 MIR192-201ENST00000384915 110 ntBASIC3.66□□□□□ -1.82
ATF4P18848 MIR329-1-201ENST00000385028 80 ntBASIC3.66□□□□□ -1.82
ATF4P18848 Y_RNA.618-201ENST00000410949 107 ntBASIC3.66□□□□□ -1.82
ATF4P18848 RNU6-1001P-201ENST00000411265 100 ntBASIC3.66□□□□□ -1.82
ATF4P18848 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.66□□□□□ -1.82
ATF4P18848 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.66□□□□□ -1.82
ATF4P18848 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.66□□□□□ -1.82
ATF4P18848 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.66□□□□□ -1.82
ATF4P18848 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.66□□□□□ -1.82
ATF4P18848 AC091178.1-203ENST00000584586 279 ntBASIC3.66□□□□□ -1.82
ATF4P18848 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.66□□□□□ -1.82
ATF4P18848 AC006006.1-201ENST00000603082 144 ntBASIC3.66□□□□□ -1.82
ATF4P18848 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.66□□□□□ -1.82
ATF4P18848 AC091953.3-201ENST00000623220 236 ntBASIC3.66□□□□□ -1.82
ATF4P18848 AC090517.3-201ENST00000625170 141 ntBASIC3.66□□□□□ -1.82
ATF4P18848 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC3.66□□□□□ -1.82
ATF4P18848 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.66□□□□□ -1.82
ATF4P18848 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.66□□□□□ -1.82
ATF4P18848 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.66□□□□□ -1.82
ATF4P18848 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ATF4P18848 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ATF4P18848 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
ATF4P18848 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ATF4P18848 RNVU1-6-201ENST00000364688 164 ntBASIC3.65□□□□□ -1.83
ATF4P18848 RNU6-1145P-201ENST00000384246 107 ntBASIC3.65□□□□□ -1.83
ATF4P18848 RNU6-130P-201ENST00000411112 103 ntBASIC3.65□□□□□ -1.83
ATF4P18848 ARF4P2-201ENST00000430209 526 ntBASIC3.65□□□□□ -1.83
ATF4P18848 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.65□□□□□ -1.83
ATF4P18848 MICF-203ENST00000432679 129 ntBASIC3.65□□□□□ -1.83
ATF4P18848 GOT2P5-201ENST00000433995 546 ntBASIC3.65□□□□□ -1.83
ATF4P18848 PCNPP5-201ENST00000452246 481 ntBASIC3.65□□□□□ -1.83
ATF4P18848 AC103975.1-201ENST00000482506 483 ntBASIC3.65□□□□□ -1.83
ATF4P18848 AC140059.1-201ENST00000489238 361 ntBASIC3.65□□□□□ -1.83
ATF4P18848 Y_RNA.683-201ENST00000516508 93 ntBASIC3.65□□□□□ -1.83
ATF4P18848 HSPE1P18-201ENST00000517602 280 ntBASIC3.65□□□□□ -1.83
ATF4P18848 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.65□□□□□ -1.83
ATF4P18848 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.65□□□□□ -1.83
ATF4P18848 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.65□□□□□ -1.83
ATF4P18848 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.65□□□□□ -1.83
ATF4P18848 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.65□□□□□ -1.83
ATF4P18848 MIR4691-201ENST00000583764 85 ntBASIC3.65□□□□□ -1.83
ATF4P18848 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.65□□□□□ -1.83
ATF4P18848 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.65□□□□□ -1.83
ATF4P18848 MIR432-201ENST00000606207 94 ntBASIC3.65□□□□□ -1.83
ATF4P18848 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.65□□□□□ -1.83
ATF4P18848 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.65□□□□□ -1.83
ATF4P18848 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ATF4P18848 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.65□□□□□ -1.83
ATF4P18848 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ATF4P18848 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
ATF4P18848 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
ATF4P18848 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms