Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.41□□□□□ -2.02
PDGFRAP16234 AC004223.2-201ENST00000590309 544 ntBASIC2.41□□□□□ -2.02
PDGFRAP16234 AP001330.5-201ENST00000607176 411 ntBASIC2.41□□□□□ -2.02
PDGFRAP16234 AC013412.1-201ENST00000610687 192 ntBASIC2.41□□□□□ -2.02
PDGFRAP16234 AC104073.3-201ENST00000610942 955 ntBASIC2.41□□□□□ -2.02
PDGFRAP16234 AL137847.3-201ENST00000611521 109 ntBASIC2.41□□□□□ -2.02
PDGFRAP16234 AC073534.2-201ENST00000620377 381 ntBASIC2.41□□□□□ -2.02
PDGFRAP16234 AC012640.5-201ENST00000623897 319 ntBASIC2.41□□□□□ -2.02
PDGFRAP16234 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.41□□□□□ -2.02
PDGFRAP16234 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PDGFRAP16234 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PDGFRAP16234 SNORD56.1-201ENST00000362913 68 ntBASIC2.4□□□□□ -2.03
PDGFRAP16234 RNU6-529P-201ENST00000363383 104 ntBASIC2.4□□□□□ -2.03
PDGFRAP16234 Y_RNA.194-201ENST00000363985 102 ntBASIC2.4□□□□□ -2.03
PDGFRAP16234 SNORA3A-201ENST00000364113 130 ntBASIC2.4□□□□□ -2.03
PDGFRAP16234 RNU4-40P-201ENST00000364351 143 ntBASIC2.4□□□□□ -2.03
PDGFRAP16234 Y_RNA.255-201ENST00000364581 97 ntBASIC2.4□□□□□ -2.03
PDGFRAP16234 OR5H15-201ENST00000383696 930 ntBASIC2.4□□□□□ -2.03
PDGFRAP16234 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.4□□□□□ -2.03
PDGFRAP16234 AL606489.2-201ENST00000433886 234 ntBASIC2.4□□□□□ -2.03
PDGFRAP16234 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.4□□□□□ -2.03
PDGFRAP16234 AC018634.1-201ENST00000437554 401 ntBASIC2.4□□□□□ -2.03
PDGFRAP16234 DNAJC19P4-201ENST00000440115 345 ntBASIC2.4□□□□□ -2.03
PDGFRAP16234 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.4□□□□□ -2.03
PDGFRAP16234 snoU13.14-201ENST00000459372 104 ntBASIC2.4□□□□□ -2.03
PDGFRAP16234 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.4□□□□□ -2.03
PDGFRAP16234 MTND2P33-201ENST00000506452 1031 ntBASIC2.4□□□□□ -2.03
PDGFRAP16234 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.4□□□□□ -2.03
PDGFRAP16234 RNU2-53P-201ENST00000516257 147 ntBASIC2.4□□□□□ -2.03
PDGFRAP16234 SNORA31.11-201ENST00000516528 139 ntBASIC2.4□□□□□ -2.03
PDGFRAP16234 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.4□□□□□ -2.03
PDGFRAP16234 AC007336.1-201ENST00000576365 3828 ntBASIC2.4□□□□□ -2.03
PDGFRAP16234 RPL30P11-203ENST00000598995 310 ntBASIC2.4□□□□□ -2.03
PDGFRAP16234 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.4□□□□□ -2.03
PDGFRAP16234 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
PDGFRAP16234 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.4□□□□□ -2.03
PDGFRAP16234 MIR6766-201ENST00000622641 72 ntBASIC2.4□□□□□ -2.03
PDGFRAP16234 AC064859.1-201ENST00000624741 174 ntBASIC2.4□□□□□ -2.03
PDGFRAP16234 AP003400.5-201ENST00000624827 617 ntBASIC2.4□□□□□ -2.03
PDGFRAP16234 ZNF658B-202ENST00000615961 3375 ntBASIC2.4□□□□□ -2.03
PDGFRAP16234 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
PDGFRAP16234 AL354685.2-201ENST00000448218 1447 ntBASIC2.4□□□□□ -2.03
PDGFRAP16234 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PDGFRAP16234 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.39□□□□□ -2.03
PDGFRAP16234 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PDGFRAP16234 RNU6-37P-201ENST00000362692 107 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 RNU6-11P-201ENST00000364234 107 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 RNU6-25P-201ENST00000383873 107 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 RNU6-1-201ENST00000383898 107 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 RNU6-48P-201ENST00000384161 107 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 RNU6-36P-201ENST00000384172 107 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 RNU6-4P-201ENST00000384205 107 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 RNU6-5P-201ENST00000384238 107 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 RNU6-3P-201ENST00000384314 107 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 RNU6-16P-201ENST00000384385 107 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 RNU6-15P-201ENST00000384534 107 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 RNU6-2-201ENST00000384627 107 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 RNU6-29P-201ENST00000384637 107 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 RNU6-9-201ENST00000384776 107 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 RNU6-33P-201ENST00000384793 107 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.39□□□□□ -2.03
PDGFRAP16234 AL591043.1-201ENST00000432461 424 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 AC016691.1-201ENST00000441321 413 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 AC007969.2-201ENST00000441891 191 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.39□□□□□ -2.03
PDGFRAP16234 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.39□□□□□ -2.03
PDGFRAP16234 RNU7-167P-201ENST00000459160 62 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 TRBV12-1-201ENST00000479785 344 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 CKS1BP2-201ENST00000497342 240 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 AC008549.1-201ENST00000512900 643 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 SNORA40.12-201ENST00000516329 111 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 AC109479.2-201ENST00000517842 174 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PDGFRAP16234 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.39□□□□□ -2.03
PDGFRAP16234 AP002770.2-201ENST00000543613 532 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.39□□□□□ -2.03
PDGFRAP16234 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.39□□□□□ -2.03
PDGFRAP16234 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.39□□□□□ -2.03
PDGFRAP16234 MIR4298-201ENST00000584380 73 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 AL355297.2-201ENST00000604792 129 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 RNU6-6P-201ENST00000606623 107 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 MIR6840-201ENST00000611937 71 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
PDGFRAP16234 AC007792.1-201ENST00000623023 402 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 AC139792.3-201ENST00000623525 224 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.39□□□□□ -2.03
PDGFRAP16234 AC002543.1-201ENST00000299783 1954 ntBASIC2.39□□□□□ -2.03
PDGFRAP16234 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
PDGFRAP16234 RNU4-24P-201ENST00000364565 139 ntBASIC2.38□□□□□ -2.03
PDGFRAP16234 Y_RNA.559-201ENST00000384686 107 ntBASIC2.38□□□□□ -2.03
PDGFRAP16234 AL355497.1-201ENST00000406262 551 ntBASIC2.38□□□□□ -2.03
PDGFRAP16234 SNORA3.2-201ENST00000408221 125 ntBASIC2.38□□□□□ -2.03
PDGFRAP16234 SNORD56-201ENST00000413522 71 ntBASIC2.38□□□□□ -2.03
PDGFRAP16234 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.38□□□□□ -2.03
PDGFRAP16234 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.38□□□□□ -2.03
PDGFRAP16234 IPO7P1-201ENST00000442031 636 ntBASIC2.38□□□□□ -2.03
PDGFRAP16234 RN7SL429P-201ENST00000479090 223 ntBASIC2.38□□□□□ -2.03
PDGFRAP16234 RN7SL489P-201ENST00000486185 223 ntBASIC2.38□□□□□ -2.03
PDGFRAP16234 RN7SL327P-201ENST00000488659 223 ntBASIC2.38□□□□□ -2.03
PDGFRAP16234 RPL23AP49-201ENST00000492925 468 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms