Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DOBP13765 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DOBP13765 AC020895.1-201ENST00000595362 272 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.59□□□□□ -1.99
HLA-DOBP13765 AC018889.1-201ENST00000605372 397 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 AP000654.2-201ENST00000605633 586 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 AL627309.6-201ENST00000606857 840 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 AC005046.1-201ENST00000608515 625 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 AL162274.2-201ENST00000614406 332 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 AC138627.2-201ENST00000624202 601 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 AL669831.3-213ENST00000636676 183 ntBASIC2.59□□□□□ -1.99
HLA-DOBP13765 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
HLA-DOBP13765 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.59□□□□□ -2
HLA-DOBP13765 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.59□□□□□ -2
HLA-DOBP13765 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.58□□□□□ -2
HLA-DOBP13765 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.58□□□□□ -2
HLA-DOBP13765 RNU6-428P-201ENST00000362942 107 ntBASIC2.58□□□□□ -2
HLA-DOBP13765 RNU6-105P-201ENST00000363909 104 ntBASIC2.58□□□□□ -2
HLA-DOBP13765 RNU6-1317P-201ENST00000364582 104 ntBASIC2.58□□□□□ -2
HLA-DOBP13765 SNORA14A-201ENST00000364773 135 ntBASIC2.58□□□□□ -2
HLA-DOBP13765 RNU6-336P-201ENST00000364891 107 ntBASIC2.58□□□□□ -2
HLA-DOBP13765 SNORA9.2-201ENST00000365361 133 ntBASIC2.58□□□□□ -2
HLA-DOBP13765 MIR181A2-201ENST00000384863 110 ntBASIC2.58□□□□□ -2
HLA-DOBP13765 SNORA75.4-201ENST00000391278 119 ntBASIC2.58□□□□□ -2
HLA-DOBP13765 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
HLA-DOBP13765 AL513475.1-201ENST00000406602 315 ntBASIC2.58□□□□□ -2
HLA-DOBP13765 AC023141.4-201ENST00000412031 328 ntBASIC2.58□□□□□ -2
HLA-DOBP13765 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DOBP13765 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DOBP13765 USP9YP30-201ENST00000430729 455 ntBASIC2.58□□□□□ -2
HLA-DOBP13765 AL133396.1-201ENST00000432048 687 ntBASIC2.58□□□□□ -2
HLA-DOBP13765 RPS29P6-201ENST00000438196 145 ntBASIC2.58□□□□□ -2
HLA-DOBP13765 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DOBP13765 ELOCP24-201ENST00000456370 334 ntBASIC2.58□□□□□ -2
HLA-DOBP13765 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.58□□□□□ -2
HLA-DOBP13765 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.58□□□□□ -2
HLA-DOBP13765 RPS29P26-201ENST00000477483 171 ntBASIC2.58□□□□□ -2
HLA-DOBP13765 MRPL42P6-201ENST00000486397 371 ntBASIC2.58□□□□□ -2
HLA-DOBP13765 RPL23AP49-201ENST00000492925 468 ntBASIC2.58□□□□□ -2
HLA-DOBP13765 AC114801.2-201ENST00000503825 781 ntBASIC2.58□□□□□ -2
HLA-DOBP13765 PTP4A1P4-201ENST00000512479 322 ntBASIC2.58□□□□□ -2
HLA-DOBP13765 SCGB1D5P-201ENST00000515134 247 ntBASIC2.58□□□□□ -2
HLA-DOBP13765 Y_RNA.670-201ENST00000516255 105 ntBASIC2.58□□□□□ -2
HLA-DOBP13765 SNORD59.2-201ENST00000516873 68 ntBASIC2.58□□□□□ -2
HLA-DOBP13765 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.58□□□□□ -2
HLA-DOBP13765 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.58□□□□□ -2
HLA-DOBP13765 CYP2C61P-201ENST00000604072 290 ntBASIC2.58□□□□□ -2
HLA-DOBP13765 AC009229.3-201ENST00000608056 282 ntBASIC2.58□□□□□ -2
HLA-DOBP13765 AC011890.2-201ENST00000613393 294 ntBASIC2.58□□□□□ -2
HLA-DOBP13765 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.58□□□□□ -2
HLA-DOBP13765 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.58□□□□□ -2
HLA-DOBP13765 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.57□□□□□ -2
HLA-DOBP13765 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.57□□□□□ -2
HLA-DOBP13765 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
HLA-DOBP13765 RNU6-527P-201ENST00000363425 104 ntBASIC2.57□□□□□ -2
HLA-DOBP13765 Y_RNA.187-201ENST00000363918 113 ntBASIC2.57□□□□□ -2
HLA-DOBP13765 RNU6-596P-201ENST00000365395 98 ntBASIC2.57□□□□□ -2
HLA-DOBP13765 XGY1-201ENST00000381172 446 ntBASIC2.57□□□□□ -2
HLA-DOBP13765 RNU6-43P-201ENST00000384302 107 ntBASIC2.57□□□□□ -2
HLA-DOBP13765 Y_RNA.579-201ENST00000390939 94 ntBASIC2.57□□□□□ -2
HLA-DOBP13765 FTH1P15-201ENST00000406984 280 ntBASIC2.57□□□□□ -2
HLA-DOBP13765 AL451074.5-201ENST00000415894 435 ntBASIC2.57□□□□□ -2
HLA-DOBP13765 AC096649.2-201ENST00000416186 393 ntBASIC2.57□□□□□ -2
HLA-DOBP13765 AL365496.1-201ENST00000426885 215 ntBASIC2.57□□□□□ -2
HLA-DOBP13765 AL161651.1-201ENST00000440882 223 ntBASIC2.57□□□□□ -2
HLA-DOBP13765 AC007677.1-201ENST00000445757 515 ntBASIC2.57□□□□□ -2
HLA-DOBP13765 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DOBP13765 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DOBP13765 ACA59.1-201ENST00000515966 143 ntBASIC2.57□□□□□ -2
HLA-DOBP13765 RNU6-581P-201ENST00000516214 105 ntBASIC2.57□□□□□ -2
HLA-DOBP13765 RNU6-307P-201ENST00000516743 106 ntBASIC2.57□□□□□ -2
HLA-DOBP13765 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.57□□□□□ -2
HLA-DOBP13765 BNIP3P16-201ENST00000589779 534 ntBASIC2.57□□□□□ -2
HLA-DOBP13765 AC011494.1-201ENST00000596454 237 ntBASIC2.57□□□□□ -2
HLA-DOBP13765 AC091953.5-201ENST00000622919 233 ntBASIC2.57□□□□□ -2
HLA-DOBP13765 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.57□□□□□ -2
HLA-DOBP13765 AC000403.1-201ENST00000613696 3585 ntBASIC2.57□□□□□ -2
HLA-DOBP13765 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HLA-DOBP13765 AC004944.1-201ENST00000517807 3059 ntBASIC2.57□□□□□ -2
HLA-DOBP13765 HAUS6P2-201ENST00000433254 2404 ntBASIC2.57□□□□□ -2
HLA-DOBP13765 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.57□□□□□ -2
HLA-DOBP13765 MTND5P10-201ENST00000603719 1809 ntBASIC2.56□□□□□ -2
HLA-DOBP13765 AL079305.1-201ENST00000623159 3008 ntBASIC2.56□□□□□ -2
HLA-DOBP13765 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.56□□□□□ -2
HLA-DOBP13765 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.56□□□□□ -2
HLA-DOBP13765 RNU6-858P-201ENST00000362436 107 ntBASIC2.56□□□□□ -2
HLA-DOBP13765 Y_RNA.146-201ENST00000363549 102 ntBASIC2.56□□□□□ -2
HLA-DOBP13765 Y_RNA.333-201ENST00000365274 102 ntBASIC2.56□□□□□ -2
HLA-DOBP13765 SNORD116-20-201ENST00000384529 92 ntBASIC2.56□□□□□ -2
HLA-DOBP13765 RNU6-310P-201ENST00000384655 107 ntBASIC2.56□□□□□ -2
HLA-DOBP13765 MIR1302-11-201ENST00000408051 138 ntBASIC2.56□□□□□ -2
HLA-DOBP13765 MIR1302-9-201ENST00000408365 138 ntBASIC2.56□□□□□ -2
HLA-DOBP13765 MIR1302-10-201ENST00000408734 138 ntBASIC2.56□□□□□ -2
HLA-DOBP13765 RNU6-1304P-201ENST00000411374 106 ntBASIC2.56□□□□□ -2
HLA-DOBP13765 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.56□□□□□ -2
HLA-DOBP13765 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DOBP13765 USMG5P1-201ENST00000425964 177 ntBASIC2.56□□□□□ -2
HLA-DOBP13765 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DOBP13765 AL591043.1-201ENST00000432461 424 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms