Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC073343.1-201ENST00000328239 651 ntBASIC1.27□□□□□ -2.21
COL11A1P12107 RNU1-62P-201ENST00000362599 164 ntBASIC1.27□□□□□ -2.21
COL11A1P12107 Y_RNA.234-201ENST00000364409 97 ntBASIC1.27□□□□□ -2.21
COL11A1P12107 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.27□□□□□ -2.21
COL11A1P12107 RNU6-769P-201ENST00000384407 104 ntBASIC1.27□□□□□ -2.21
COL11A1P12107 RPL23AP32-201ENST00000395315 459 ntBASIC1.27□□□□□ -2.21
COL11A1P12107 ELOCP17-201ENST00000414751 326 ntBASIC1.27□□□□□ -2.21
COL11A1P12107 CDK8P2-201ENST00000415020 547 ntBASIC1.27□□□□□ -2.21
COL11A1P12107 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.27□□□□□ -2.21
COL11A1P12107 AL353689.1-201ENST00000438895 199 ntBASIC1.27□□□□□ -2.21
COL11A1P12107 AC016691.1-201ENST00000441321 413 ntBASIC1.27□□□□□ -2.21
COL11A1P12107 AC020550.1-201ENST00000447385 163 ntBASIC1.27□□□□□ -2.21
COL11A1P12107 RPS27AP8-201ENST00000452665 445 ntBASIC1.27□□□□□ -2.21
COL11A1P12107 RPL23AP3-201ENST00000453844 468 ntBASIC1.27□□□□□ -2.21
COL11A1P12107 AC108059.3-201ENST00000456388 214 ntBASIC1.27□□□□□ -2.21
COL11A1P12107 PMCHL2-203ENST00000457791 237 ntBASIC1.27□□□□□ -2.21
COL11A1P12107 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.27□□□□□ -2.21
COL11A1P12107 MTND1P3-201ENST00000484956 952 ntBASIC1.27□□□□□ -2.21
COL11A1P12107 MTCO2P4-201ENST00000517968 247 ntBASIC1.27□□□□□ -2.21
COL11A1P12107 AC090572.1-201ENST00000519251 160 ntBASIC1.27□□□□□ -2.21
COL11A1P12107 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.27□□□□□ -2.21
COL11A1P12107 AP003181.2-201ENST00000528941 181 ntBASIC1.27□□□□□ -2.21
COL11A1P12107 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.27□□□□□ -2.21
COL11A1P12107 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.27□□□□□ -2.21
COL11A1P12107 AC006362.1-201ENST00000567392 174 ntBASIC1.27□□□□□ -2.21
COL11A1P12107 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.27□□□□□ -2.21
COL11A1P12107 AP000403.1-201ENST00000603349 851 ntBASIC1.27□□□□□ -2.21
COL11A1P12107 AC016727.2-201ENST00000603988 621 ntBASIC1.27□□□□□ -2.21
COL11A1P12107 AC090578.1-201ENST00000604955 591 ntBASIC1.27□□□□□ -2.21
COL11A1P12107 AC108706.1-201ENST00000611053 297 ntBASIC1.27□□□□□ -2.21
COL11A1P12107 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.27□□□□□ -2.21
COL11A1P12107 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.27□□□□□ -2.21
COL11A1P12107 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.27□□□□□ -2.21
COL11A1P12107 AC073308.1-201ENST00000623696 305 ntBASIC1.27□□□□□ -2.21
COL11A1P12107 AL136313.1-201ENST00000624804 202 ntBASIC1.27□□□□□ -2.21
COL11A1P12107 AC090582.1-201ENST00000636321 199 ntBASIC1.27□□□□□ -2.21
COL11A1P12107 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.27□□□□□ -2.21
COL11A1P12107 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
COL11A1P12107 RNU6-553P-201ENST00000364047 96 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 RNU5E-5P-201ENST00000365379 116 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.26□□□□□ -2.21
COL11A1P12107 SNORA18.2-201ENST00000383865 132 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 SNORD116-2-201ENST00000384274 95 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 RNU1-148P-201ENST00000384472 162 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 RNY1P4-201ENST00000384595 115 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 SNORD116-6-201ENST00000384711 96 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 U6atac.2-201ENST00000408644 118 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 Y_RNA.608-201ENST00000410647 95 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 RPS3AP3-201ENST00000411933 242 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 AIMP1P2-201ENST00000425294 312 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.26□□□□□ -2.21
COL11A1P12107 AC009961.2-201ENST00000435771 251 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 RPL22P17-201ENST00000438729 315 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.26□□□□□ -2.21
COL11A1P12107 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.26□□□□□ -2.21
COL11A1P12107 AC132479.1-201ENST00000449160 144 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 RNA5SP269-201ENST00000459032 137 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 AC055731.1-201ENST00000474387 401 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 AC026801.1-201ENST00000497178 464 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.26□□□□□ -2.21
COL11A1P12107 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.26□□□□□ -2.21
COL11A1P12107 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.26□□□□□ -2.21
COL11A1P12107 AC005178.1-201ENST00000508392 440 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 Y_RNA.689-201ENST00000516589 107 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.26□□□□□ -2.21
COL11A1P12107 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.26□□□□□ -2.21
COL11A1P12107 AL121821.2-201ENST00000556081 394 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 MIR3913-1-201ENST00000577744 102 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.26□□□□□ -2.21
COL11A1P12107 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.26□□□□□ -2.21
COL11A1P12107 NBR2-204ENST00000587322 63 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 AC091965.4-201ENST00000607691 587 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 AC011939.3-201ENST00000613686 466 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 AC009509.4-201ENST00000619202 509 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
COL11A1P12107 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.26□□□□□ -2.21
COL11A1P12107 AL390237.1-201ENST00000404226 1415 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 FARSBP1-201ENST00000435808 1778 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 Y_RNA.46-201ENST00000362695 102 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 RNU6-181P-201ENST00000363225 107 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 Y_RNA.159-201ENST00000363674 87 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 RNU5A-8P-201ENST00000364102 114 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
COL11A1P12107 SNORA40C-201ENST00000391285 128 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.26□□□□□ -2.21
COL11A1P12107 NDUFB4P7-201ENST00000423198 363 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 AC007283.2-201ENST00000424739 197 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 ZNF863P-201ENST00000426746 417 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.26□□□□□ -2.21
COL11A1P12107 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.26□□□□□ -2.21
COL11A1P12107 AL122001.1-201ENST00000457027 370 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 MTCO2P18-201ENST00000457151 658 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 AC093899.1-201ENST00000457984 376 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.26□□□□□ -2.21
COL11A1P12107 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.26□□□□□ -2.21
COL11A1P12107 AC023141.11-201ENST00000508864 202 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.26□□□□□ -2.21
COL11A1P12107 RNU6-445P-201ENST00000516949 107 ntBASIC1.26□□□□□ -2.21
COL11A1P12107 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.26□□□□□ -2.21
COL11A1P12107 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms