Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC245014.2-201ENST00000603689 287 ntBASIC2.1□□□□□ -2.07
TOP1P11387 AC091805.2-201ENST00000603848 235 ntBASIC2.1□□□□□ -2.07
TOP1P11387 AL136363.2-201ENST00000604173 851 ntBASIC2.1□□□□□ -2.07
TOP1P11387 AC007363.1-201ENST00000604736 620 ntBASIC2.1□□□□□ -2.07
TOP1P11387 AC246785.4-201ENST00000605374 287 ntBASIC2.1□□□□□ -2.07
TOP1P11387 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.1□□□□□ -2.07
TOP1P11387 AC005296.1-201ENST00000616145 209 ntBASIC2.1□□□□□ -2.07
TOP1P11387 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.1□□□□□ -2.07
TOP1P11387 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
TOP1P11387 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TOP1P11387 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.09□□□□□ -2.07
TOP1P11387 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
TOP1P11387 MTND5P26-201ENST00000426018 1752 ntBASIC2.09□□□□□ -2.07
TOP1P11387 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
TOP1P11387 RNU6-181P-201ENST00000363225 107 ntBASIC2.09□□□□□ -2.07
TOP1P11387 RNU6-74P-201ENST00000384235 107 ntBASIC2.09□□□□□ -2.07
TOP1P11387 MIR558-201ENST00000384920 94 ntBASIC2.09□□□□□ -2.07
TOP1P11387 ELOCP4-201ENST00000420090 333 ntBASIC2.09□□□□□ -2.07
TOP1P11387 MTCO2P11-201ENST00000431069 680 ntBASIC2.09□□□□□ -2.07
TOP1P11387 AL136380.1-201ENST00000447970 162 ntBASIC2.09□□□□□ -2.07
TOP1P11387 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.09□□□□□ -2.07
TOP1P11387 SNORA25.11-201ENST00000515935 105 ntBASIC2.09□□□□□ -2.07
TOP1P11387 RN7SKP298-201ENST00000515950 94 ntBASIC2.09□□□□□ -2.07
TOP1P11387 RNU6-143P-201ENST00000516942 93 ntBASIC2.09□□□□□ -2.07
TOP1P11387 RNU6-445P-201ENST00000516949 107 ntBASIC2.09□□□□□ -2.07
TOP1P11387 RNU6-1092P-201ENST00000516955 87 ntBASIC2.09□□□□□ -2.07
TOP1P11387 SNORA48.11-201ENST00000517015 89 ntBASIC2.09□□□□□ -2.07
TOP1P11387 PSMA3P-201ENST00000555485 635 ntBASIC2.09□□□□□ -2.07
TOP1P11387 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.09□□□□□ -2.07
TOP1P11387 AC233702.2-202ENST00000562547 291 ntBASIC2.09□□□□□ -2.07
TOP1P11387 AL031274.2-201ENST00000599419 203 ntBASIC2.09□□□□□ -2.07
TOP1P11387 AC012493.3-201ENST00000604494 112 ntBASIC2.09□□□□□ -2.07
TOP1P11387 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
TOP1P11387 AC103710.2-202ENST00000641454 2853 ntBASIC2.08□□□□□ -2.08
TOP1P11387 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.08□□□□□ -2.08
TOP1P11387 AC138393.1-203ENST00000327086 343 ntBASIC2.08□□□□□ -2.08
TOP1P11387 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.08□□□□□ -2.08
TOP1P11387 Y_RNA.159-201ENST00000363674 87 ntBASIC2.08□□□□□ -2.08
TOP1P11387 SNORA25B-201ENST00000365507 128 ntBASIC2.08□□□□□ -2.08
TOP1P11387 RNU6-259P-201ENST00000383999 107 ntBASIC2.08□□□□□ -2.08
TOP1P11387 Y_RNA.517-201ENST00000384551 106 ntBASIC2.08□□□□□ -2.08
TOP1P11387 MIR676-201ENST00000390702 67 ntBASIC2.08□□□□□ -2.08
TOP1P11387 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.08□□□□□ -2.08
TOP1P11387 OR51A5P-201ENST00000415429 942 ntBASIC2.08□□□□□ -2.08
TOP1P11387 RAC1P6-201ENST00000423911 575 ntBASIC2.08□□□□□ -2.08
TOP1P11387 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.08□□□□□ -2.08
TOP1P11387 AC137499.1-201ENST00000427602 88 ntBASIC2.08□□□□□ -2.08
TOP1P11387 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.08□□□□□ -2.08
TOP1P11387 RPL23AP30-201ENST00000432419 501 ntBASIC2.08□□□□□ -2.08
TOP1P11387 MTATP6P16-201ENST00000434543 526 ntBASIC2.08□□□□□ -2.08
TOP1P11387 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.08□□□□□ -2.08
TOP1P11387 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.08□□□□□ -2.08
TOP1P11387 C1DP4-201ENST00000455429 424 ntBASIC2.08□□□□□ -2.08
TOP1P11387 SNORD97-201ENST00000459187 142 ntBASIC2.08□□□□□ -2.08
TOP1P11387 AC112771.1-201ENST00000463581 102 ntBASIC2.08□□□□□ -2.08
TOP1P11387 AP003392.2-201ENST00000527269 208 ntBASIC2.08□□□□□ -2.08
TOP1P11387 OR5B19P-201ENST00000531766 928 ntBASIC2.08□□□□□ -2.08
TOP1P11387 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.08□□□□□ -2.08
TOP1P11387 MIR4299-201ENST00000577899 72 ntBASIC2.08□□□□□ -2.08
TOP1P11387 AL121992.2-201ENST00000606262 256 ntBASIC2.08□□□□□ -2.08
TOP1P11387 MIR98-201ENST00000606724 119 ntBASIC2.08□□□□□ -2.08
TOP1P11387 HULC.1-201ENST00000612720 240 ntBASIC2.08□□□□□ -2.08
TOP1P11387 AC072046.2-201ENST00000618366 268 ntBASIC2.08□□□□□ -2.08
TOP1P11387 AC008121.3-201ENST00000618726 433 ntBASIC2.08□□□□□ -2.08
TOP1P11387 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.08□□□□□ -2.08
TOP1P11387 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
TOP1P11387 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.07□□□□□ -2.08
TOP1P11387 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.07□□□□□ -2.08
TOP1P11387 U3.13-201ENST00000364804 214 ntBASIC2.07□□□□□ -2.08
TOP1P11387 Z98749.2-208ENST00000381646 500 ntBASIC2.07□□□□□ -2.08
TOP1P11387 RNU6-1103P-201ENST00000384150 107 ntBASIC2.07□□□□□ -2.08
TOP1P11387 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
TOP1P11387 AL158823.1-201ENST00000418441 478 ntBASIC2.07□□□□□ -2.08
TOP1P11387 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.07□□□□□ -2.08
TOP1P11387 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.07□□□□□ -2.08
TOP1P11387 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.07□□□□□ -2.08
TOP1P11387 AC011005.2-201ENST00000487324 359 ntBASIC2.07□□□□□ -2.08
TOP1P11387 AC140059.1-201ENST00000489238 361 ntBASIC2.07□□□□□ -2.08
TOP1P11387 RPL39P36-201ENST00000490784 156 ntBASIC2.07□□□□□ -2.08
TOP1P11387 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.07□□□□□ -2.08
TOP1P11387 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
TOP1P11387 AC108078.1-201ENST00000508073 725 ntBASIC2.07□□□□□ -2.08
TOP1P11387 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.07□□□□□ -2.08
TOP1P11387 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.07□□□□□ -2.08
TOP1P11387 SNORA4.4-201ENST00000515921 135 ntBASIC2.07□□□□□ -2.08
TOP1P11387 RNU6-250P-201ENST00000516958 103 ntBASIC2.07□□□□□ -2.08
TOP1P11387 AC011979.2-201ENST00000527568 352 ntBASIC2.07□□□□□ -2.08
TOP1P11387 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.07□□□□□ -2.08
TOP1P11387 AL391840.1-201ENST00000571144 367 ntBASIC2.07□□□□□ -2.08
TOP1P11387 AL391646.1-201ENST00000603860 190 ntBASIC2.07□□□□□ -2.08
TOP1P11387 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
TOP1P11387 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.07□□□□□ -2.08
TOP1P11387 RNA5SP276-201ENST00000362580 94 ntBASIC2.06□□□□□ -2.08
TOP1P11387 RNU6-946P-201ENST00000383878 107 ntBASIC2.06□□□□□ -2.08
TOP1P11387 MIR1-2-201ENST00000384961 85 ntBASIC2.06□□□□□ -2.08
TOP1P11387 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.06□□□□□ -2.08
TOP1P11387 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.06□□□□□ -2.08
TOP1P11387 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.06□□□□□ -2.08
TOP1P11387 MED13P1-201ENST00000428342 171 ntBASIC2.06□□□□□ -2.08
TOP1P11387 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms