Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 RNU6-131P-201ENST00000391144 107 ntBASIC4.35□□□□□ -1.71
RARAP10276 RNU6-735P-201ENST00000410612 107 ntBASIC4.35□□□□□ -1.71
RARAP10276 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.35□□□□□ -1.71
RARAP10276 HMGN2P30-201ENST00000423237 256 ntBASIC4.35□□□□□ -1.71
RARAP10276 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.35□□□□□ -1.71
RARAP10276 IFNA11P-201ENST00000446352 526 ntBASIC4.35□□□□□ -1.71
RARAP10276 snoU13.6-201ENST00000458785 104 ntBASIC4.35□□□□□ -1.71
RARAP10276 RN7SL303P-201ENST00000469773 251 ntBASIC4.35□□□□□ -1.71
RARAP10276 AC140059.1-201ENST00000489238 361 ntBASIC4.35□□□□□ -1.71
RARAP10276 RPL30P5-201ENST00000494923 336 ntBASIC4.35□□□□□ -1.71
RARAP10276 HMGB3P3-201ENST00000510526 400 ntBASIC4.35□□□□□ -1.71
RARAP10276 RN7SKP122-201ENST00000515923 296 ntBASIC4.35□□□□□ -1.71
RARAP10276 RNU6-191P-201ENST00000516295 94 ntBASIC4.35□□□□□ -1.71
RARAP10276 RNU6-62P-201ENST00000516526 102 ntBASIC4.35□□□□□ -1.71
RARAP10276 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.35□□□□□ -1.71
RARAP10276 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.35□□□□□ -1.71
RARAP10276 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.35□□□□□ -1.71
RARAP10276 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.35□□□□□ -1.71
RARAP10276 AC091953.5-201ENST00000622919 233 ntBASIC4.35□□□□□ -1.71
RARAP10276 AC011944.2-201ENST00000624440 683 ntBASIC4.35□□□□□ -1.71
RARAP10276 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
RARAP10276 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
RARAP10276 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RARAP10276 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RARAP10276 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.35□□□□□ -1.71
RARAP10276 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RARAP10276 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RARAP10276 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RARAP10276 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.34□□□□□ -1.71
RARAP10276 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RARAP10276 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.34□□□□□ -1.71
RARAP10276 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RARAP10276 RNA5SP322-201ENST00000363617 119 ntBASIC4.34□□□□□ -1.71
RARAP10276 SNORA72.2-201ENST00000365028 127 ntBASIC4.34□□□□□ -1.71
RARAP10276 Y_RNA.343-201ENST00000365354 112 ntBASIC4.34□□□□□ -1.71
RARAP10276 U3.15-201ENST00000365398 212 ntBASIC4.34□□□□□ -1.71
RARAP10276 MIR493-201ENST00000385254 89 ntBASIC4.34□□□□□ -1.71
RARAP10276 SNORA48.7-201ENST00000391302 135 ntBASIC4.34□□□□□ -1.71
RARAP10276 RPL23AP48-201ENST00000406913 488 ntBASIC4.34□□□□□ -1.71
RARAP10276 FTH1P15-201ENST00000406984 280 ntBASIC4.34□□□□□ -1.71
RARAP10276 SNORA3C-201ENST00000408792 125 ntBASIC4.34□□□□□ -1.71
RARAP10276 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.34□□□□□ -1.71
RARAP10276 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.34□□□□□ -1.71
RARAP10276 AC112220.1-201ENST00000434628 355 ntBASIC4.34□□□□□ -1.71
RARAP10276 AC125238.1-201ENST00000448842 249 ntBASIC4.34□□□□□ -1.71
RARAP10276 AP000705.1-201ENST00000454567 350 ntBASIC4.34□□□□□ -1.71
RARAP10276 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.34□□□□□ -1.71
RARAP10276 RNU6-313P-201ENST00000516317 112 ntBASIC4.34□□□□□ -1.71
RARAP10276 RNU6-1282P-201ENST00000516735 96 ntBASIC4.34□□□□□ -1.71
RARAP10276 RNA5SP54-201ENST00000516951 92 ntBASIC4.34□□□□□ -1.71
RARAP10276 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.34□□□□□ -1.71
RARAP10276 TVP23BP1-201ENST00000557500 617 ntBASIC4.34□□□□□ -1.71
RARAP10276 MIR4277-201ENST00000578298 84 ntBASIC4.34□□□□□ -1.71
RARAP10276 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.34□□□□□ -1.71
RARAP10276 AL133393.1-201ENST00000603277 287 ntBASIC4.34□□□□□ -1.71
RARAP10276 AC012468.1-201ENST00000604888 430 ntBASIC4.34□□□□□ -1.71
RARAP10276 AC114781.5-201ENST00000615297 108 ntBASIC4.34□□□□□ -1.71
RARAP10276 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.34□□□□□ -1.71
RARAP10276 AC092628.2-201ENST00000622492 339 ntBASIC4.34□□□□□ -1.71
RARAP10276 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RARAP10276 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
RARAP10276 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.34□□□□□ -1.71
RARAP10276 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RARAP10276 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RARAP10276 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RARAP10276 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
RARAP10276 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RARAP10276 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RARAP10276 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.33□□□□□ -1.72
RARAP10276 RNU1-32P-201ENST00000363937 159 ntBASIC4.33□□□□□ -1.72
RARAP10276 SNORA7.2-201ENST00000364446 145 ntBASIC4.33□□□□□ -1.72
RARAP10276 RNA5SP366-201ENST00000365454 123 ntBASIC4.33□□□□□ -1.72
RARAP10276 Y_RNA.568-201ENST00000384742 113 ntBASIC4.33□□□□□ -1.72
RARAP10276 NDUFB4P6-201ENST00000436819 366 ntBASIC4.33□□□□□ -1.72
RARAP10276 AL356535.1-201ENST00000440335 398 ntBASIC4.33□□□□□ -1.72
RARAP10276 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.33□□□□□ -1.72
RARAP10276 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC4.33□□□□□ -1.72
RARAP10276 SNORA31.23-201ENST00000517219 133 ntBASIC4.33□□□□□ -1.72
RARAP10276 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.33□□□□□ -1.72
RARAP10276 MIR3145-201ENST00000580727 82 ntBASIC4.33□□□□□ -1.72
RARAP10276 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.33□□□□□ -1.72
RARAP10276 MIR4298-201ENST00000584380 73 ntBASIC4.33□□□□□ -1.72
RARAP10276 MIR92B-201ENST00000607575 96 ntBASIC4.33□□□□□ -1.72
RARAP10276 AL023881.1-201ENST00000621088 301 ntBASIC4.33□□□□□ -1.72
RARAP10276 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RARAP10276 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.33□□□□□ -1.72
RARAP10276 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RARAP10276 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
RARAP10276 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
RARAP10276 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RARAP10276 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RARAP10276 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.32□□□□□ -1.72
RARAP10276 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RARAP10276 Y_RNA.101-201ENST00000363154 102 ntBASIC4.32□□□□□ -1.72
RARAP10276 RN7SKP280-201ENST00000364196 304 ntBASIC4.32□□□□□ -1.72
RARAP10276 SNORA62-201ENST00000365493 153 ntBASIC4.32□□□□□ -1.72
RARAP10276 RNU6-449P-201ENST00000383914 107 ntBASIC4.32□□□□□ -1.72
RARAP10276 Y_RNA.400-201ENST00000383963 111 ntBASIC4.32□□□□□ -1.72
RARAP10276 RNU1-89P-201ENST00000384592 164 ntBASIC4.32□□□□□ -1.72
RARAP10276 RNU6-417P-201ENST00000384712 107 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms