Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC023538.1-201ENST00000534576 736 ntBASIC0.68□□□□□ -2.3
FREM3P0C091 AC018630.3-201ENST00000542637 96 ntBASIC0.68□□□□□ -2.3
FREM3P0C091 BNIP3P9-201ENST00000603714 553 ntBASIC0.68□□□□□ -2.3
FREM3P0C091 AC211469.2-201ENST00000605461 205 ntBASIC0.68□□□□□ -2.3
FREM3P0C091 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.68□□□□□ -2.3
FREM3P0C091 AC099654.5-201ENST00000636479 350 ntBASIC0.68□□□□□ -2.3
FREM3P0C091 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
FREM3P0C091 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
FREM3P0C091 RNU6-23P-201ENST00000363283 107 ntBASIC0.68□□□□□ -2.3
FREM3P0C091 RNU6-512P-201ENST00000364438 103 ntBASIC0.68□□□□□ -2.3
FREM3P0C091 AL133475.1-201ENST00000404414 305 ntBASIC0.68□□□□□ -2.3
FREM3P0C091 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
FREM3P0C091 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.68□□□□□ -2.3
FREM3P0C091 MRPS36P1-201ENST00000421291 307 ntBASIC0.68□□□□□ -2.3
FREM3P0C091 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.68□□□□□ -2.3
FREM3P0C091 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.68□□□□□ -2.3
FREM3P0C091 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.68□□□□□ -2.3
FREM3P0C091 RNU6-333P-201ENST00000459117 107 ntBASIC0.68□□□□□ -2.3
FREM3P0C091 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.68□□□□□ -2.3
FREM3P0C091 AC011005.2-201ENST00000487324 359 ntBASIC0.68□□□□□ -2.3
FREM3P0C091 AC104806.1-201ENST00000508720 308 ntBASIC0.68□□□□□ -2.3
FREM3P0C091 RNA5SP436-201ENST00000516020 115 ntBASIC0.68□□□□□ -2.3
FREM3P0C091 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.68□□□□□ -2.3
FREM3P0C091 BNIP3P31-201ENST00000604515 566 ntBASIC0.68□□□□□ -2.3
FREM3P0C091 AC112220.2-201ENST00000605513 533 ntBASIC0.68□□□□□ -2.3
FREM3P0C091 MIR924-201ENST00000638017 53 ntBASIC0.68□□□□□ -2.3
FREM3P0C091 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
FREM3P0C091 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
FREM3P0C091 RNU6-655P-201ENST00000362858 107 ntBASIC0.67□□□□□ -2.3
FREM3P0C091 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.67□□□□□ -2.3
FREM3P0C091 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.67□□□□□ -2.3
FREM3P0C091 AL135790.2-201ENST00000437701 267 ntBASIC0.67□□□□□ -2.3
FREM3P0C091 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.67□□□□□ -2.3
FREM3P0C091 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.67□□□□□ -2.3
FREM3P0C091 AL606517.1-201ENST00000446914 387 ntBASIC0.67□□□□□ -2.3
FREM3P0C091 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.67□□□□□ -2.3
FREM3P0C091 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.67□□□□□ -2.3
FREM3P0C091 RPL30P7-201ENST00000479312 323 ntBASIC0.67□□□□□ -2.3
FREM3P0C091 RPL30P1-201ENST00000488676 339 ntBASIC0.67□□□□□ -2.3
FREM3P0C091 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.67□□□□□ -2.3
FREM3P0C091 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.67□□□□□ -2.3
FREM3P0C091 AC019288.1-201ENST00000557918 224 ntBASIC0.67□□□□□ -2.3
FREM3P0C091 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.67□□□□□ -2.3
FREM3P0C091 AC100821.1-201ENST00000523153 2479 ntBASIC0.67□□□□□ -2.3
FREM3P0C091 RNU6-26P-201ENST00000383985 107 ntBASIC0.67□□□□□ -2.3
FREM3P0C091 RNU6-1274P-201ENST00000384557 107 ntBASIC0.67□□□□□ -2.3
FREM3P0C091 MIR193B-201ENST00000384907 83 ntBASIC0.67□□□□□ -2.3
FREM3P0C091 UBE2V1P10-201ENST00000414685 269 ntBASIC0.67□□□□□ -2.3
FREM3P0C091 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.67□□□□□ -2.3
FREM3P0C091 AL953862.1-201ENST00000423016 168 ntBASIC0.67□□□□□ -2.3
FREM3P0C091 AC005534.2-201ENST00000431047 433 ntBASIC0.67□□□□□ -2.3
FREM3P0C091 AC114982.1-201ENST00000469402 321 ntBASIC0.67□□□□□ -2.3
FREM3P0C091 MED28P2-201ENST00000475771 317 ntBASIC0.67□□□□□ -2.3
FREM3P0C091 AC117454.1-201ENST00000491120 168 ntBASIC0.67□□□□□ -2.3
FREM3P0C091 MTCYBP40-201ENST00000509390 1135 ntBASIC0.67□□□□□ -2.3
FREM3P0C091 RNU6-1225P-201ENST00000516336 65 ntBASIC0.67□□□□□ -2.3
FREM3P0C091 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.67□□□□□ -2.3
FREM3P0C091 MIR4293-201ENST00000584305 78 ntBASIC0.67□□□□□ -2.3
FREM3P0C091 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC0.67□□□□□ -2.3
FREM3P0C091 MIR8065-201ENST00000620577 100 ntBASIC0.67□□□□□ -2.3
FREM3P0C091 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.66□□□□□ -2.3
FREM3P0C091 SNORD33-201ENST00000362761 85 ntBASIC0.66□□□□□ -2.3
FREM3P0C091 RNU6-1164P-201ENST00000364428 107 ntBASIC0.66□□□□□ -2.3
FREM3P0C091 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.66□□□□□ -2.3
FREM3P0C091 SNORA22-201ENST00000383907 134 ntBASIC0.66□□□□□ -2.3
FREM3P0C091 Y_RNA.408-201ENST00000383987 102 ntBASIC0.66□□□□□ -2.3
FREM3P0C091 SNORA70.7-201ENST00000384159 133 ntBASIC0.66□□□□□ -2.3
FREM3P0C091 SNORA22C-201ENST00000384614 134 ntBASIC0.66□□□□□ -2.3
FREM3P0C091 AL603865.2-201ENST00000401679 213 ntBASIC0.66□□□□□ -2.3
FREM3P0C091 MTND3P20-201ENST00000407663 186 ntBASIC0.66□□□□□ -2.3
FREM3P0C091 AC009518.2-201ENST00000418056 731 ntBASIC0.66□□□□□ -2.3
FREM3P0C091 RPL21P111-201ENST00000418453 477 ntBASIC0.66□□□□□ -2.3
FREM3P0C091 AC069257.2-201ENST00000441819 155 ntBASIC0.66□□□□□ -2.3
FREM3P0C091 NEFMP1-201ENST00000443423 1006 ntBASIC0.66□□□□□ -2.3
FREM3P0C091 PTENP1-201ENST00000447117 1215 ntBASIC0.66□□□□□ -2.3
FREM3P0C091 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.66□□□□□ -2.3
FREM3P0C091 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
FREM3P0C091 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.66□□□□□ -2.3
FREM3P0C091 snoU13.9-201ENST00000458927 103 ntBASIC0.66□□□□□ -2.3
FREM3P0C091 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.66□□□□□ -2.3
FREM3P0C091 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.66□□□□□ -2.3
FREM3P0C091 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.66□□□□□ -2.3
FREM3P0C091 VN1R87P-201ENST00000596706 487 ntBASIC0.66□□□□□ -2.3
FREM3P0C091 RPL21P136-201ENST00000605378 396 ntBASIC0.66□□□□□ -2.3
FREM3P0C091 AC092574.1-201ENST00000609771 420 ntBASIC0.66□□□□□ -2.3
FREM3P0C091 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.66□□□□□ -2.3
FREM3P0C091 AC013470.4-201ENST00000619978 986 ntBASIC0.66□□□□□ -2.3
FREM3P0C091 MIR3529-201ENST00000637713 78 ntBASIC0.66□□□□□ -2.3
FREM3P0C091 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.65□□□□□ -2.3
FREM3P0C091 MIR26B-201ENST00000362251 77 ntBASIC0.65□□□□□ -2.3
FREM3P0C091 MIR1305-201ENST00000408300 86 ntBASIC0.65□□□□□ -2.3
FREM3P0C091 MIR320C1-201ENST00000408566 88 ntBASIC0.65□□□□□ -2.3
FREM3P0C091 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.65□□□□□ -2.3
FREM3P0C091 AC016831.2-201ENST00000417179 352 ntBASIC0.65□□□□□ -2.3
FREM3P0C091 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.65□□□□□ -2.3
FREM3P0C091 CST2P1-201ENST00000425770 87 ntBASIC0.65□□□□□ -2.3
FREM3P0C091 CBX3P6-201ENST00000430257 527 ntBASIC0.65□□□□□ -2.3
FREM3P0C091 USP9YP35-201ENST00000435696 412 ntBASIC0.65□□□□□ -2.3
FREM3P0C091 HMGN1P13-201ENST00000505795 138 ntBASIC0.65□□□□□ -2.3
FREM3P0C091 AC009646.1-201ENST00000510455 318 ntBASIC0.65□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms