Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AC008413.1-201ENST00000511864 177 ntBASIC2.12□□□□□ -2.07
SFTPBP07988 SNORA4.4-201ENST00000515921 135 ntBASIC2.12□□□□□ -2.07
SFTPBP07988 RNU6-405P-201ENST00000516637 110 ntBASIC2.12□□□□□ -2.07
SFTPBP07988 RNU7-193P-201ENST00000516723 65 ntBASIC2.12□□□□□ -2.07
SFTPBP07988 SNORA25.17-201ENST00000517184 124 ntBASIC2.12□□□□□ -2.07
SFTPBP07988 CYCSP26-201ENST00000534107 320 ntBASIC2.12□□□□□ -2.07
SFTPBP07988 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.12□□□□□ -2.07
SFTPBP07988 NBR2-204ENST00000587322 63 ntBASIC2.12□□□□□ -2.07
SFTPBP07988 AC087683.1-201ENST00000591187 441 ntBASIC2.12□□□□□ -2.07
SFTPBP07988 AC012507.3-201ENST00000603556 477 ntBASIC2.12□□□□□ -2.07
SFTPBP07988 AC091805.2-201ENST00000603848 235 ntBASIC2.12□□□□□ -2.07
SFTPBP07988 AC022202.1-201ENST00000613515 211 ntBASIC2.12□□□□□ -2.07
SFTPBP07988 AC007792.1-201ENST00000623023 402 ntBASIC2.12□□□□□ -2.07
SFTPBP07988 AC243829.7-201ENST00000633081 225 ntBASIC2.12□□□□□ -2.07
SFTPBP07988 Z82209.1-201ENST00000422141 2135 ntBASIC2.11□□□□□ -2.07
SFTPBP07988 RNU6-428P-201ENST00000362942 107 ntBASIC2.11□□□□□ -2.07
SFTPBP07988 RNU6-105P-201ENST00000363909 104 ntBASIC2.11□□□□□ -2.07
SFTPBP07988 RNA5SP456-201ENST00000364002 114 ntBASIC2.11□□□□□ -2.07
SFTPBP07988 Y_RNA.409-201ENST00000383990 98 ntBASIC2.11□□□□□ -2.07
SFTPBP07988 SNORA70B-201ENST00000384210 135 ntBASIC2.11□□□□□ -2.07
SFTPBP07988 RNU6-1274P-201ENST00000384557 107 ntBASIC2.11□□□□□ -2.07
SFTPBP07988 MIR544A-201ENST00000384855 91 ntBASIC2.11□□□□□ -2.07
SFTPBP07988 AL663109.1-201ENST00000411498 844 ntBASIC2.11□□□□□ -2.07
SFTPBP07988 Z83846.1-201ENST00000446798 265 ntBASIC2.11□□□□□ -2.07
SFTPBP07988 MTND1P29-201ENST00000448112 647 ntBASIC2.11□□□□□ -2.07
SFTPBP07988 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.11□□□□□ -2.07
SFTPBP07988 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.11□□□□□ -2.07
SFTPBP07988 RNU7-180P-201ENST00000459240 63 ntBASIC2.11□□□□□ -2.07
SFTPBP07988 AC018868.1-201ENST00000491307 315 ntBASIC2.11□□□□□ -2.07
SFTPBP07988 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.11□□□□□ -2.07
SFTPBP07988 AC093534.1-201ENST00000504977 132 ntBASIC2.11□□□□□ -2.07
SFTPBP07988 YWHAEP4-201ENST00000505390 198 ntBASIC2.11□□□□□ -2.07
SFTPBP07988 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.11□□□□□ -2.07
SFTPBP07988 RNU6-377P-201ENST00000515965 102 ntBASIC2.11□□□□□ -2.07
SFTPBP07988 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.11□□□□□ -2.07
SFTPBP07988 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.11□□□□□ -2.07
SFTPBP07988 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.11□□□□□ -2.07
SFTPBP07988 AP001893.2-201ENST00000526949 202 ntBASIC2.11□□□□□ -2.07
SFTPBP07988 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.11□□□□□ -2.07
SFTPBP07988 AC118273.2-201ENST00000532092 465 ntBASIC2.11□□□□□ -2.07
SFTPBP07988 AC022880.1-201ENST00000534017 973 ntBASIC2.11□□□□□ -2.07
SFTPBP07988 AC091544.4-201ENST00000555268 342 ntBASIC2.11□□□□□ -2.07
SFTPBP07988 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.11□□□□□ -2.07
SFTPBP07988 AC009127.3-201ENST00000570531 403 ntBASIC2.11□□□□□ -2.07
SFTPBP07988 AL670379.2-201ENST00000604983 252 ntBASIC2.11□□□□□ -2.07
SFTPBP07988 AL590808.1-201ENST00000618696 141 ntBASIC2.11□□□□□ -2.07
SFTPBP07988 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.11□□□□□ -2.07
SFTPBP07988 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.11□□□□□ -2.07
SFTPBP07988 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SFTPBP07988 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.1□□□□□ -2.07
SFTPBP07988 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SFTPBP07988 snoU2_19.1-201ENST00000362361 80 ntBASIC2.1□□□□□ -2.07
SFTPBP07988 SNORA25B-201ENST00000365507 128 ntBASIC2.1□□□□□ -2.07
SFTPBP07988 RNU6-1042P-201ENST00000384204 107 ntBASIC2.1□□□□□ -2.07
SFTPBP07988 Y_RNA.480-201ENST00000384364 102 ntBASIC2.1□□□□□ -2.07
SFTPBP07988 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SFTPBP07988 RNU2-66P-201ENST00000410650 161 ntBASIC2.1□□□□□ -2.07
SFTPBP07988 RNA5SP270-201ENST00000411361 118 ntBASIC2.1□□□□□ -2.07
SFTPBP07988 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.1□□□□□ -2.07
SFTPBP07988 AL353752.1-201ENST00000454946 260 ntBASIC2.1□□□□□ -2.07
SFTPBP07988 AL122001.1-201ENST00000457027 370 ntBASIC2.1□□□□□ -2.07
SFTPBP07988 snoU13.14-201ENST00000459372 104 ntBASIC2.1□□□□□ -2.07
SFTPBP07988 UBL5P3-201ENST00000475112 231 ntBASIC2.1□□□□□ -2.07
SFTPBP07988 AL163973.1-201ENST00000484753 577 ntBASIC2.1□□□□□ -2.07
SFTPBP07988 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.1□□□□□ -2.07
SFTPBP07988 RNA5SP320-201ENST00000516263 124 ntBASIC2.1□□□□□ -2.07
SFTPBP07988 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.1□□□□□ -2.07
SFTPBP07988 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.1□□□□□ -2.07
SFTPBP07988 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.1□□□□□ -2.07
SFTPBP07988 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.1□□□□□ -2.07
SFTPBP07988 MTCO3P23-201ENST00000561363 289 ntBASIC2.1□□□□□ -2.07
SFTPBP07988 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.1□□□□□ -2.07
SFTPBP07988 MIR3126-201ENST00000577443 74 ntBASIC2.1□□□□□ -2.07
SFTPBP07988 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.1□□□□□ -2.07
SFTPBP07988 APOOP1-201ENST00000604695 592 ntBASIC2.1□□□□□ -2.07
SFTPBP07988 AC245008.1-201ENST00000608123 476 ntBASIC2.1□□□□□ -2.07
SFTPBP07988 Z82243.1-201ENST00000609432 473 ntBASIC2.1□□□□□ -2.07
SFTPBP07988 AC087241.4-201ENST00000612441 480 ntBASIC2.1□□□□□ -2.07
SFTPBP07988 Z99129.1-201ENST00000612510 255 ntBASIC2.1□□□□□ -2.07
SFTPBP07988 AL161423.1-201ENST00000613700 262 ntBASIC2.1□□□□□ -2.07
SFTPBP07988 AL159153.1-201ENST00000619688 317 ntBASIC2.1□□□□□ -2.07
SFTPBP07988 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.1□□□□□ -2.07
SFTPBP07988 AC139792.3-201ENST00000623525 224 ntBASIC2.1□□□□□ -2.07
SFTPBP07988 AC012640.5-201ENST00000623897 319 ntBASIC2.1□□□□□ -2.07
SFTPBP07988 MIR203B-201ENST00000636080 86 ntBASIC2.1□□□□□ -2.07
SFTPBP07988 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.1□□□□□ -2.07
SFTPBP07988 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.1□□□□□ -2.07
SFTPBP07988 MTND5P26-201ENST00000426018 1752 ntBASIC2.1□□□□□ -2.07
SFTPBP07988 AC002543.1-201ENST00000299783 1954 ntBASIC2.09□□□□□ -2.07
SFTPBP07988 RNU6-336P-201ENST00000364891 107 ntBASIC2.09□□□□□ -2.07
SFTPBP07988 RNU1-51P-201ENST00000365345 176 ntBASIC2.09□□□□□ -2.07
SFTPBP07988 MIR27B-201ENST00000385129 97 ntBASIC2.09□□□□□ -2.07
SFTPBP07988 MIR561-201ENST00000385216 97 ntBASIC2.09□□□□□ -2.07
SFTPBP07988 CBX3P9-201ENST00000402326 552 ntBASIC2.09□□□□□ -2.07
SFTPBP07988 RNU6-293P-201ENST00000411259 106 ntBASIC2.09□□□□□ -2.07
SFTPBP07988 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.09□□□□□ -2.07
SFTPBP07988 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.09□□□□□ -2.07
SFTPBP07988 EDDM3CP-201ENST00000415977 425 ntBASIC2.09□□□□□ -2.07
SFTPBP07988 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.09□□□□□ -2.07
SFTPBP07988 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms