Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.05□□□□□ -2.24
HLA-DQB2P05538 AL138889.2-201ENST00000603883 242 ntBASIC1.05□□□□□ -2.24
HLA-DQB2P05538 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
HLA-DQB2P05538 FRG1KP-201ENST00000623592 341 ntBASIC1.05□□□□□ -2.24
HLA-DQB2P05538 AC022513.1-201ENST00000624512 117 ntBASIC1.05□□□□□ -2.24
HLA-DQB2P05538 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.05□□□□□ -2.24
HLA-DQB2P05538 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
HLA-DQB2P05538 Y_RNA.46-201ENST00000362695 102 ntBASIC1.04□□□□□ -2.24
HLA-DQB2P05538 RNU1-22P-201ENST00000363334 158 ntBASIC1.04□□□□□ -2.24
HLA-DQB2P05538 RNU6-960P-201ENST00000364056 120 ntBASIC1.04□□□□□ -2.24
HLA-DQB2P05538 SNORA4.1-201ENST00000364263 144 ntBASIC1.04□□□□□ -2.24
HLA-DQB2P05538 SNORA62.1-201ENST00000364287 154 ntBASIC1.04□□□□□ -2.24
HLA-DQB2P05538 RNU2-62P-201ENST00000410868 191 ntBASIC1.04□□□□□ -2.24
HLA-DQB2P05538 NCOR1P3-201ENST00000420479 303 ntBASIC1.04□□□□□ -2.24
HLA-DQB2P05538 AC092648.1-201ENST00000425870 423 ntBASIC1.04□□□□□ -2.24
HLA-DQB2P05538 AL669831.1-202ENST00000428504 417 ntBASIC1.04□□□□□ -2.24
HLA-DQB2P05538 CBX3P6-201ENST00000430257 527 ntBASIC1.04□□□□□ -2.24
HLA-DQB2P05538 RPS15AP10-201ENST00000432472 382 ntBASIC1.04□□□□□ -2.24
HLA-DQB2P05538 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.04□□□□□ -2.24
HLA-DQB2P05538 AL008629.1-201ENST00000438615 184 ntBASIC1.04□□□□□ -2.24
HLA-DQB2P05538 EEF1A1P39-201ENST00000440791 250 ntBASIC1.04□□□□□ -2.24
HLA-DQB2P05538 RPS29P28-201ENST00000446439 141 ntBASIC1.04□□□□□ -2.24
HLA-DQB2P05538 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.04□□□□□ -2.24
HLA-DQB2P05538 AC245517.4-201ENST00000448601 281 ntBASIC1.04□□□□□ -2.24
HLA-DQB2P05538 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.04□□□□□ -2.24
HLA-DQB2P05538 snoU13.9-201ENST00000458927 103 ntBASIC1.04□□□□□ -2.24
HLA-DQB2P05538 AC108078.2-201ENST00000510750 236 ntBASIC1.04□□□□□ -2.24
HLA-DQB2P05538 TRMT112P2-201ENST00000512910 132 ntBASIC1.04□□□□□ -2.24
HLA-DQB2P05538 AC112206.3-201ENST00000514578 389 ntBASIC1.04□□□□□ -2.24
HLA-DQB2P05538 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.04□□□□□ -2.24
HLA-DQB2P05538 AP003122.4-201ENST00000530980 758 ntBASIC1.04□□□□□ -2.24
HLA-DQB2P05538 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
HLA-DQB2P05538 AC023050.2-201ENST00000544968 387 ntBASIC1.04□□□□□ -2.24
HLA-DQB2P05538 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.04□□□□□ -2.24
HLA-DQB2P05538 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.04□□□□□ -2.24
HLA-DQB2P05538 AC016727.1-205ENST00000605437 569 ntBASIC1.04□□□□□ -2.24
HLA-DQB2P05538 AC063943.3-201ENST00000615562 356 ntBASIC1.04□□□□□ -2.24
HLA-DQB2P05538 AC024940.5-201ENST00000622889 474 ntBASIC1.04□□□□□ -2.24
HLA-DQB2P05538 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.04□□□□□ -2.24
HLA-DQB2P05538 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.04□□□□□ -2.24
HLA-DQB2P05538 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.03□□□□□ -2.24
HLA-DQB2P05538 RNU6-160P-201ENST00000384591 107 ntBASIC1.03□□□□□ -2.24
HLA-DQB2P05538 RNU6-939P-201ENST00000384634 107 ntBASIC1.03□□□□□ -2.24
HLA-DQB2P05538 MIR10A-201ENST00000385043 110 ntBASIC1.03□□□□□ -2.24
HLA-DQB2P05538 Y_RNA.597-201ENST00000410463 100 ntBASIC1.03□□□□□ -2.24
HLA-DQB2P05538 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.03□□□□□ -2.24
HLA-DQB2P05538 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.03□□□□□ -2.24
HLA-DQB2P05538 RPS3AP37-201ENST00000419176 745 ntBASIC1.03□□□□□ -2.24
HLA-DQB2P05538 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.03□□□□□ -2.24
HLA-DQB2P05538 MTND2P4-201ENST00000445034 1004 ntBASIC1.03□□□□□ -2.24
HLA-DQB2P05538 RNA5SP445-201ENST00000515889 115 ntBASIC1.03□□□□□ -2.24
HLA-DQB2P05538 Y_RNA.689-201ENST00000516589 107 ntBASIC1.03□□□□□ -2.24
HLA-DQB2P05538 RNU6-902P-201ENST00000517212 91 ntBASIC1.03□□□□□ -2.24
HLA-DQB2P05538 TRAV32-201ENST00000553993 340 ntBASIC1.03□□□□□ -2.24
HLA-DQB2P05538 AC137800.2-201ENST00000574375 120 ntBASIC1.03□□□□□ -2.24
HLA-DQB2P05538 SNORA77B-201ENST00000578179 125 ntBASIC1.03□□□□□ -2.24
HLA-DQB2P05538 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.03□□□□□ -2.24
HLA-DQB2P05538 AC144521.1-201ENST00000607148 956 ntBASIC1.03□□□□□ -2.24
HLA-DQB2P05538 AL590240.4-201ENST00000616908 390 ntBASIC1.03□□□□□ -2.24
HLA-DQB2P05538 SCARNA4-202ENST00000625402 129 ntBASIC1.03□□□□□ -2.24
HLA-DQB2P05538 AC245060.5-201ENST00000610778 3293 ntBASIC1.02□□□□□ -2.25
HLA-DQB2P05538 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
HLA-DQB2P05538 MIR302D-201ENST00000362275 68 ntBASIC1.02□□□□□ -2.25
HLA-DQB2P05538 RNU6-271P-201ENST00000363858 105 ntBASIC1.02□□□□□ -2.25
HLA-DQB2P05538 SNORD114-6-201ENST00000364393 72 ntBASIC1.02□□□□□ -2.25
HLA-DQB2P05538 RNU4-38P-201ENST00000364472 129 ntBASIC1.02□□□□□ -2.25
HLA-DQB2P05538 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.02□□□□□ -2.25
HLA-DQB2P05538 MTCYBP5-201ENST00000423752 1135 ntBASIC1.02□□□□□ -2.25
HLA-DQB2P05538 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.02□□□□□ -2.25
HLA-DQB2P05538 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.02□□□□□ -2.25
HLA-DQB2P05538 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.02□□□□□ -2.25
HLA-DQB2P05538 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.02□□□□□ -2.25
HLA-DQB2P05538 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.02□□□□□ -2.25
HLA-DQB2P05538 RPL23AP35-201ENST00000451906 501 ntBASIC1.02□□□□□ -2.25
HLA-DQB2P05538 DUXAP8-207ENST00000456786 622 ntBASIC1.02□□□□□ -2.25
HLA-DQB2P05538 AC087477.1-201ENST00000465747 340 ntBASIC1.02□□□□□ -2.25
HLA-DQB2P05538 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.02□□□□□ -2.25
HLA-DQB2P05538 AC009646.1-201ENST00000510455 318 ntBASIC1.02□□□□□ -2.25
HLA-DQB2P05538 Y_RNA.687-201ENST00000516558 91 ntBASIC1.02□□□□□ -2.25
HLA-DQB2P05538 SNORA43.2-201ENST00000516652 128 ntBASIC1.02□□□□□ -2.25
HLA-DQB2P05538 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.02□□□□□ -2.25
HLA-DQB2P05538 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.02□□□□□ -2.25
HLA-DQB2P05538 AC002400.1-201ENST00000569310 726 ntBASIC1.02□□□□□ -2.25
HLA-DQB2P05538 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.02□□□□□ -2.25
HLA-DQB2P05538 AL391001.1-201ENST00000602747 715 ntBASIC1.02□□□□□ -2.25
HLA-DQB2P05538 AC022022.2-201ENST00000602989 360 ntBASIC1.02□□□□□ -2.25
HLA-DQB2P05538 AL592221.1-201ENST00000605266 382 ntBASIC1.02□□□□□ -2.25
HLA-DQB2P05538 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC1.02□□□□□ -2.25
HLA-DQB2P05538 AC008993.2-201ENST00000631744 806 ntBASIC1.02□□□□□ -2.25
HLA-DQB2P05538 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
HLA-DQB2P05538 AC106858.1-201ENST00000637497 429 ntBASIC1.02□□□□□ -2.25
HLA-DQB2P05538 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.02□□□□□ -2.25
HLA-DQB2P05538 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
HLA-DQB2P05538 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
HLA-DQB2P05538 OR4G2P-201ENST00000328113 903 ntBASIC1.01□□□□□ -2.25
HLA-DQB2P05538 RNU6-112P-201ENST00000363599 104 ntBASIC1.01□□□□□ -2.25
HLA-DQB2P05538 AC019070.1-201ENST00000415008 1024 ntBASIC1.01□□□□□ -2.25
HLA-DQB2P05538 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.01□□□□□ -2.25
HLA-DQB2P05538 CR769776.1-201ENST00000441254 787 ntBASIC1.01□□□□□ -2.25
HLA-DQB2P05538 AL022238.1-201ENST00000442557 355 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms