Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC040904.1-201ENST00000590850 223 ntBASIC1.57□□□□□ -2.16
CD74P04233 AL031274.2-201ENST00000599419 203 ntBASIC1.57□□□□□ -2.16
CD74P04233 AL138889.2-201ENST00000603883 242 ntBASIC1.57□□□□□ -2.16
CD74P04233 AC121247.2-201ENST00000604776 136 ntBASIC1.57□□□□□ -2.16
CD74P04233 AC098614.4-201ENST00000607601 462 ntBASIC1.57□□□□□ -2.16
CD74P04233 AL773524.1-201ENST00000614065 229 ntBASIC1.57□□□□□ -2.16
CD74P04233 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.57□□□□□ -2.16
CD74P04233 MIR7843-201ENST00000622274 79 ntBASIC1.57□□□□□ -2.16
CD74P04233 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.57□□□□□ -2.16
CD74P04233 ZNF355P-201ENST00000427301 3216 ntBASIC1.57□□□□□ -2.16
CD74P04233 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CD74P04233 SNORD114-1-201ENST00000362705 72 ntBASIC1.56□□□□□ -2.16
CD74P04233 RNU6-942P-201ENST00000363002 107 ntBASIC1.56□□□□□ -2.16
CD74P04233 SNORD114-19-201ENST00000363072 75 ntBASIC1.56□□□□□ -2.16
CD74P04233 RNU6-456P-201ENST00000384493 107 ntBASIC1.56□□□□□ -2.16
CD74P04233 RNU4-26P-201ENST00000410270 107 ntBASIC1.56□□□□□ -2.16
CD74P04233 RNU6-248P-201ENST00000410720 107 ntBASIC1.56□□□□□ -2.16
CD74P04233 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.56□□□□□ -2.16
CD74P04233 MTND3P17-201ENST00000416968 344 ntBASIC1.56□□□□□ -2.16
CD74P04233 AC244636.1-201ENST00000421152 228 ntBASIC1.56□□□□□ -2.16
CD74P04233 HMGB1P31-201ENST00000437242 427 ntBASIC1.56□□□□□ -2.16
CD74P04233 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.56□□□□□ -2.16
CD74P04233 AC079781.2-201ENST00000446424 169 ntBASIC1.56□□□□□ -2.16
CD74P04233 MTND1P27-201ENST00000451117 902 ntBASIC1.56□□□□□ -2.16
CD74P04233 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.56□□□□□ -2.16
CD74P04233 RPL7P43-201ENST00000478876 753 ntBASIC1.56□□□□□ -2.16
CD74P04233 RPL9P6-201ENST00000492764 598 ntBASIC1.56□□□□□ -2.16
CD74P04233 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.56□□□□□ -2.16
CD74P04233 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.56□□□□□ -2.16
CD74P04233 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.56□□□□□ -2.16
CD74P04233 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.56□□□□□ -2.16
CD74P04233 MIR4419B-201ENST00000577260 68 ntBASIC1.56□□□□□ -2.16
CD74P04233 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.56□□□□□ -2.16
CD74P04233 AC008088.1-201ENST00000580993 280 ntBASIC1.56□□□□□ -2.16
CD74P04233 AC073539.2-201ENST00000597113 165 ntBASIC1.56□□□□□ -2.16
CD74P04233 AC245014.2-201ENST00000603689 287 ntBASIC1.56□□□□□ -2.16
CD74P04233 AC246785.4-201ENST00000605374 287 ntBASIC1.56□□□□□ -2.16
CD74P04233 AC021646.1-201ENST00000605469 484 ntBASIC1.56□□□□□ -2.16
CD74P04233 RNU6-91P-201ENST00000607774 107 ntBASIC1.56□□□□□ -2.16
CD74P04233 AC096772.1-201ENST00000609146 564 ntBASIC1.56□□□□□ -2.16
CD74P04233 AC138649.3-201ENST00000622154 254 ntBASIC1.56□□□□□ -2.16
CD74P04233 AC011155.2-201ENST00000623202 216 ntBASIC1.56□□□□□ -2.16
CD74P04233 MIR3529-201ENST00000637713 78 ntBASIC1.56□□□□□ -2.16
CD74P04233 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.56□□□□□ -2.16
CD74P04233 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.56□□□□□ -2.16
CD74P04233 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.56□□□□□ -2.16
CD74P04233 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.55□□□□□ -2.16
CD74P04233 RNU4-91P-201ENST00000364778 135 ntBASIC1.55□□□□□ -2.16
CD74P04233 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.55□□□□□ -2.16
CD74P04233 RNU6-74P-201ENST00000384235 107 ntBASIC1.55□□□□□ -2.16
CD74P04233 RNA5SP212-201ENST00000391223 107 ntBASIC1.55□□□□□ -2.16
CD74P04233 AL079342.1-201ENST00000401460 267 ntBASIC1.55□□□□□ -2.16
CD74P04233 RNU2-2P-201ENST00000410396 191 ntBASIC1.55□□□□□ -2.16
CD74P04233 RNU2-20P-201ENST00000410425 191 ntBASIC1.55□□□□□ -2.16
CD74P04233 RNU6-387P-201ENST00000411331 105 ntBASIC1.55□□□□□ -2.16
CD74P04233 OR6C66P-201ENST00000414917 930 ntBASIC1.55□□□□□ -2.16
CD74P04233 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.55□□□□□ -2.16
CD74P04233 AL445646.1-201ENST00000431784 216 ntBASIC1.55□□□□□ -2.16
CD74P04233 AL358934.1-201ENST00000432346 324 ntBASIC1.55□□□□□ -2.16
CD74P04233 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.55□□□□□ -2.16
CD74P04233 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.55□□□□□ -2.16
CD74P04233 NDUFB1P2-201ENST00000449477 176 ntBASIC1.55□□□□□ -2.16
CD74P04233 RPS29P15-201ENST00000458329 171 ntBASIC1.55□□□□□ -2.16
CD74P04233 MTCO2P6-201ENST00000463134 685 ntBASIC1.55□□□□□ -2.16
CD74P04233 AC006512.1-201ENST00000468816 291 ntBASIC1.55□□□□□ -2.16
CD74P04233 AC087884.1-201ENST00000469738 328 ntBASIC1.55□□□□□ -2.16
CD74P04233 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.55□□□□□ -2.16
CD74P04233 MTCO3P28-201ENST00000513351 515 ntBASIC1.55□□□□□ -2.16
CD74P04233 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.55□□□□□ -2.16
CD74P04233 RNU6-237P-201ENST00000515985 71 ntBASIC1.55□□□□□ -2.16
CD74P04233 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.55□□□□□ -2.16
CD74P04233 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.55□□□□□ -2.16
CD74P04233 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.55□□□□□ -2.16
CD74P04233 AC073410.2-201ENST00000603240 332 ntBASIC1.55□□□□□ -2.16
CD74P04233 AL590229.1-201ENST00000603497 542 ntBASIC1.55□□□□□ -2.16
CD74P04233 Z99497.2-201ENST00000603634 310 ntBASIC1.55□□□□□ -2.16
CD74P04233 U2.15-201ENST00000611544 191 ntBASIC1.55□□□□□ -2.16
CD74P04233 U2.16-201ENST00000613119 191 ntBASIC1.55□□□□□ -2.16
CD74P04233 U2.12-201ENST00000613778 191 ntBASIC1.55□□□□□ -2.16
CD74P04233 U2.20-201ENST00000613956 192 ntBASIC1.55□□□□□ -2.16
CD74P04233 U2.9-201ENST00000615427 191 ntBASIC1.55□□□□□ -2.16
CD74P04233 U2.11-201ENST00000616345 191 ntBASIC1.55□□□□□ -2.16
CD74P04233 U2.2-201ENST00000616535 191 ntBASIC1.55□□□□□ -2.16
CD74P04233 U2.3-201ENST00000617785 191 ntBASIC1.55□□□□□ -2.16
CD74P04233 U2.19-201ENST00000618602 191 ntBASIC1.55□□□□□ -2.16
CD74P04233 RNU2-1-201ENST00000618664 191 ntBASIC1.55□□□□□ -2.16
CD74P04233 U2.6-201ENST00000619225 191 ntBASIC1.55□□□□□ -2.16
CD74P04233 U2.5-201ENST00000619465 191 ntBASIC1.55□□□□□ -2.16
CD74P04233 AC026585.1-201ENST00000619582 524 ntBASIC1.55□□□□□ -2.16
CD74P04233 U2.10-201ENST00000620268 191 ntBASIC1.55□□□□□ -2.16
CD74P04233 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.55□□□□□ -2.16
CD74P04233 MIR219B-201ENST00000637023 88 ntBASIC1.55□□□□□ -2.16
CD74P04233 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.55□□□□□ -2.16
CD74P04233 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CD74P04233 MTND5P17-201ENST00000418405 1603 ntBASIC1.55□□□□□ -2.16
CD74P04233 U3.13-201ENST00000364804 214 ntBASIC1.54□□□□□ -2.16
CD74P04233 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CD74P04233 RNU6-550P-201ENST00000391057 101 ntBASIC1.54□□□□□ -2.16
CD74P04233 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CD74P04233 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms