Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PDGFAP04085 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
PDGFAP04085 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PDGFAP04085 RNU1-62P-201ENST00000362599 164 ntBASIC4.18□□□□□ -1.74
PDGFAP04085 RNU6-799P-201ENST00000363567 107 ntBASIC4.18□□□□□ -1.74
PDGFAP04085 Y_RNA.233-201ENST00000364407 101 ntBASIC4.18□□□□□ -1.74
PDGFAP04085 RNA5SP39-201ENST00000411245 120 ntBASIC4.18□□□□□ -1.74
PDGFAP04085 PHBP16-201ENST00000446318 950 ntBASIC4.18□□□□□ -1.74
PDGFAP04085 IFNA11P-201ENST00000446352 526 ntBASIC4.18□□□□□ -1.74
PDGFAP04085 AP002884.2-201ENST00000471647 395 ntBASIC4.18□□□□□ -1.74
PDGFAP04085 AC091179.3-201ENST00000474761 144 ntBASIC4.18□□□□□ -1.74
PDGFAP04085 AL121594.1-201ENST00000475906 575 ntBASIC4.18□□□□□ -1.74
PDGFAP04085 AC074198.2-201ENST00000508153 258 ntBASIC4.18□□□□□ -1.74
PDGFAP04085 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.18□□□□□ -1.74
PDGFAP04085 RNU5F-2P-201ENST00000516066 82 ntBASIC4.18□□□□□ -1.74
PDGFAP04085 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.18□□□□□ -1.74
PDGFAP04085 AP003730.1-201ENST00000524605 285 ntBASIC4.18□□□□□ -1.74
PDGFAP04085 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.18□□□□□ -1.74
PDGFAP04085 AC055872.1-201ENST00000570978 278 ntBASIC4.18□□□□□ -1.74
PDGFAP04085 MIR3653-201ENST00000625572 110 ntBASIC4.18□□□□□ -1.74
PDGFAP04085 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.18□□□□□ -1.74
PDGFAP04085 AL133383.2-201ENST00000622958 2336 ntBASIC4.18□□□□□ -1.74
PDGFAP04085 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.18□□□□□ -1.74
PDGFAP04085 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
PDGFAP04085 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
PDGFAP04085 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PDGFAP04085 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
PDGFAP04085 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PDGFAP04085 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PDGFAP04085 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
PDGFAP04085 SNORD74.4-201ENST00000364129 80 ntBASIC4.17□□□□□ -1.74
PDGFAP04085 RNA5SP366-201ENST00000365454 123 ntBASIC4.17□□□□□ -1.74
PDGFAP04085 SNORA18.3-201ENST00000384122 132 ntBASIC4.17□□□□□ -1.74
PDGFAP04085 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PDGFAP04085 AC023141.4-201ENST00000412031 328 ntBASIC4.17□□□□□ -1.74
PDGFAP04085 AC011998.1-201ENST00000433403 117 ntBASIC4.17□□□□□ -1.74
PDGFAP04085 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.17□□□□□ -1.74
PDGFAP04085 AC146944.2-203ENST00000502493 354 ntBASIC4.17□□□□□ -1.74
PDGFAP04085 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.17□□□□□ -1.74
PDGFAP04085 AC139495.1-202ENST00000513164 354 ntBASIC4.17□□□□□ -1.74
PDGFAP04085 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.17□□□□□ -1.74
PDGFAP04085 TRAV8-5-201ENST00000537369 341 ntBASIC4.17□□□□□ -1.74
PDGFAP04085 MIR4429-201ENST00000580105 73 ntBASIC4.17□□□□□ -1.74
PDGFAP04085 RPL7P50-201ENST00000600588 727 ntBASIC4.17□□□□□ -1.74
PDGFAP04085 AL034555.1-201ENST00000604816 211 ntBASIC4.17□□□□□ -1.74
PDGFAP04085 AC005828.6-201ENST00000606610 232 ntBASIC4.17□□□□□ -1.74
PDGFAP04085 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PDGFAP04085 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
PDGFAP04085 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.17□□□□□ -1.74
PDGFAP04085 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
PDGFAP04085 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.17□□□□□ -1.74
PDGFAP04085 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
PDGFAP04085 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PDGFAP04085 AC016588.2-201ENST00000632484 3021 ntBASIC4.16□□□□□ -1.74
PDGFAP04085 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PDGFAP04085 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PDGFAP04085 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.16□□□□□ -1.74
PDGFAP04085 Y_RNA.217-201ENST00000364214 105 ntBASIC4.16□□□□□ -1.74
PDGFAP04085 RNU1-132P-201ENST00000364300 164 ntBASIC4.16□□□□□ -1.74
PDGFAP04085 MIR549A-201ENST00000385268 96 ntBASIC4.16□□□□□ -1.74
PDGFAP04085 RNU6-918P-201ENST00000391219 106 ntBASIC4.16□□□□□ -1.74
PDGFAP04085 ELOCP21-201ENST00000412558 336 ntBASIC4.16□□□□□ -1.74
PDGFAP04085 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.16□□□□□ -1.74
PDGFAP04085 AL714022.1-201ENST00000439897 151 ntBASIC4.16□□□□□ -1.74
PDGFAP04085 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.16□□□□□ -1.74
PDGFAP04085 Y_RNA.641-201ENST00000459414 105 ntBASIC4.16□□□□□ -1.74
PDGFAP04085 RNU7-23P-201ENST00000459465 62 ntBASIC4.16□□□□□ -1.74
PDGFAP04085 RN7SL604P-201ENST00000492589 296 ntBASIC4.16□□□□□ -1.74
PDGFAP04085 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.16□□□□□ -1.74
PDGFAP04085 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.16□□□□□ -1.74
PDGFAP04085 PPBPP1-201ENST00000510807 373 ntBASIC4.16□□□□□ -1.74
PDGFAP04085 RNU6-155P-201ENST00000516347 100 ntBASIC4.16□□□□□ -1.74
PDGFAP04085 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.16□□□□□ -1.74
PDGFAP04085 RPS15AP11-201ENST00000594193 385 ntBASIC4.16□□□□□ -1.74
PDGFAP04085 AC025946.2-201ENST00000603398 234 ntBASIC4.16□□□□□ -1.74
PDGFAP04085 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.16□□□□□ -1.74
PDGFAP04085 AC004467.1-201ENST00000615678 330 ntBASIC4.16□□□□□ -1.74
PDGFAP04085 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.16□□□□□ -1.74
PDGFAP04085 MIR4727-201ENST00000622232 55 ntBASIC4.16□□□□□ -1.74
PDGFAP04085 AC091932.3-201ENST00000624223 323 ntBASIC4.16□□□□□ -1.74
PDGFAP04085 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.16□□□□□ -1.74
PDGFAP04085 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PDGFAP04085 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
PDGFAP04085 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.16□□□□□ -1.74
PDGFAP04085 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
PDGFAP04085 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.16□□□□□ -1.74
PDGFAP04085 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.15□□□□□ -1.74
PDGFAP04085 AL136164.3-201ENST00000624429 3978 ntBASIC4.15□□□□□ -1.74
PDGFAP04085 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.15□□□□□ -1.74
PDGFAP04085 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.15□□□□□ -1.74
PDGFAP04085 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
PDGFAP04085 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.15□□□□□ -1.74
PDGFAP04085 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.15□□□□□ -1.74
PDGFAP04085 AC002546.1-201ENST00000588041 2504 ntBASIC4.15□□□□□ -1.74
PDGFAP04085 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PDGFAP04085 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.15□□□□□ -1.75
PDGFAP04085 Y_RNA.101-201ENST00000363154 102 ntBASIC4.15□□□□□ -1.75
PDGFAP04085 Y_RNA.240-201ENST00000364469 95 ntBASIC4.15□□□□□ -1.75
PDGFAP04085 RNU6-1248P-201ENST00000391096 64 ntBASIC4.15□□□□□ -1.75
PDGFAP04085 CBX3P9-201ENST00000402326 552 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms